Ajap002735.1
Basic Information
- Insect
- Asobara japonica
- Gene Symbol
- -
- Assembly
- GCA_017141405.1
- Location
- JADHZF010000010.1:3597657-3598016[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-13 6.2e-11 42.6 0.0 1 37 15 50 15 55 0.89 2 2 8.2 4.7e+03 -1.9 0.0 2 14 91 103 90 105 0.78
Sequence Information
- Coding Sequence
- ATGCCAAAGTCTCATACACCACACAACAAAATACTAAAGTATTCTAATGAAGATTTACAAAAGGCTCTGGAGGCTGTCAGGGGTGGAGAGACGATTGGACAGGCAGCTAAACACTATGGAATTCCTAAGTCAACATTACATGCAAAGTTCAGTGGACGAAGTGATCCGGAAGTCCTGAAGAGAGGTCCCTCAAGTGTGTTAACAAGTGCAGAAGAAACTCGATTGAGAAAATGGATCCTTGACAAAGCTGCACTTAGCTTTCCTATGCATCCAGACGAAGTGAAAAATGCTGTGCAAAAAGTGTTGAAGGAAGTTTTAAGGGACAATCCCTTCACCGACGATCGACCAGGAGAAACCTGA
- Protein Sequence
- MPKSHTPHNKILKYSNEDLQKALEAVRGGETIGQAAKHYGIPKSTLHAKFSGRSDPEVLKRGPSSVLTSAEETRLRKWILDKAALSFPMHPDEVKNAVQKVLKEVLRDNPFTDDRPGET
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -