Basic Information

Gene Symbol
JARID2
Assembly
GCA_017141405.1
Location
JADHZF010000007.1:4125878-4134458[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 6 3e+04 -3.9 0.1 69 82 177 193 156 194 0.56
2 2 4.7e-23 2.3e-19 70.3 0.0 6 89 1352 1433 1348 1433 0.94

Sequence Information

Coding Sequence
ATGGTACTTGGACGAAATGACAAACGAAAAAGAAAGGAGGGCGATCTCGTCGACCTCATGGACCCAGCTTCGTCCGCTCCAAAAAGGGCAAAAGTTCACGCTCAAAGAAAATTTGCGCAGGGTGTCGCGACGATATTCAGTCCAGGTCCAACACTCGTCAAGGAGAAGGAGCGTCCGAAGCCCGCCTTGGTAACCGAATTGATCACCCATAAGCGCCCAAATACCGAGGACTTTCTCACCTTCCTCTGCTTTCGTGGCACTTCAATTCTCCCCCCTAGCCTGAACTTCTTCAACCAGTCAACGAAGAAGGAAAAATCCGAGACTAAAACATCACGTTCAACTTCACAACCATCCTCGCAGCGTTCACTGCCAGGCTCCTCAAAGCCCAATGAAGAATCACCGAAAAAATCACTCTCCACTCCCAAAACTGCACCACAATCCTCATCTACTGTATCCCCACAAACCAAAGCCAAAAAGAAATTGTCAAACGTCTCCCAAAATCCTAACATCGTTCACAAGCCCTCAAATAAATTCAAAACCGCAACATCGACTGTGCAGGCCCTAAAGAAAAAATATAAGGAGCAGAGGCTTGCTAAGCAAAGAATCGAGAACAAGATCAAAAAAACTGTTATGAAAACGCGTTCAGCCACAAATCGACCCCTCTTGAAGCAGTCAACCAAAATCATTCCCAGCACTTTAGTGAAGCACATCGAGAAGAAAAATCTCAGCTTACGCAGCGGCGCAGTTCTCGATAGGTGTTCACCAAAGACTCCCAAATTGCTTCCAAAAACAAGAAAAAAGCCTATAAAGAAGAAAATTGAAGAGTCTGAGTCGAGTGAAGAGTCATCGGATGCTCAGTCTACACCGAAAAGAGTCGTCAAGCCAAAGTCAAATGTCAAGCAAACACCTAAGGAGAAATTGAAGACTAATTCATTGAAGAGTAAAGACTCAGGACGACGAGTCACTAGGTCACATGGTGAGCCTAGTCAGCCAAACCAAAGGCCATCGAGAAAAACTAAAGAGGCTGCAGCAGTTTACATGGAAATCCTGAGTCGTAAGCTCGTTAATGAAGATTTGGATAATGATGACAACATGTCGTTGGAGAGCTTTCCTGAAATTCCAAATGCTAAACGTGATGCAACAGCAAAAAAACTTGTGACTGATAAAAAGAGAAATGTTGGGACTAAGAAGGTGAATGAAGTTGAGGAGAAATCGAGTCAGAAGCTTGTGAGGTCAAAGAGAATTGTCAAACAATCGAAATACTCTGATAGCGATGATAATTACTCGATTGAGTCTGATAGAAGCAGTCGCACTCCTCTTAATGTAAAAACTCGAGAACTCCCTAGGAGAAGTGCTAATCTAACGAAAGCAGCAAGTCGAAATTTACGATCGACTGTGAAAAATGTAGACCAAAAAATTGATAAACTTGCTAAAGCTGCAAAACAAACTGCAAGCAATGTAAAAGACAAGAGAGGAATTAAAGTGAAGCGCAAAAATGATGACGAGTCCTCGAAGGCAAATCCGTTGGTCAAGCCAAATGAGAAAGGTCAGAAATTGTTGAAAAAGAAAATGGAGGAGGAGTCTGAAGAGGAGCCCTTGGGTATAGTTTTGACTAGAATCAATAAAGCGAAACCTACAAAATCACCTGGGAGACGCCCGGGCAAAGCCACGGAGCCATCGAAAAAGTCTGCTCCGGAACCTGTGATAATGATAAAAAAGATTAATAAAGATACTGAGAATACACCGAAGGGCTCCGATGATGAAGGATCATTTCGGGGCTTCAGTAAAATATCCACGACAAACTTGCCAAGTATCTGCGCGCTAAAAATGAATAGTGACGATATGAATCCTGGAAAAAATGGAGAGACTGAAGCAAAAATCGAAACTAAAGATTGTGAAGTCCCGGAATTAGATGGAAAAACTGCTGCGCCGCAAAAAAGTCCAAAAAACGAAGCGGAATCTGGGTCATTGGTGAAGCCCGCTGAGATTGTCGTAAAAGAATTTGTCCAAGGCTCGAAAAGAAAGTCCATATCGAGTGAAGTTCCTGCACCTCAATCCATCGATAAACGAAACTTCATAGACGTACCAACACTGTCATCTTTGGGGCGTAAAGAACGTGTCAATATGTCAACGGAGCAGATCGAGAAGTGGCTGACTGAAAGTTCAATGGTGAAGGAGGAGAGCAAAGCTGAGATGGAGACCGCGATCAATTACCCCTATGCCCTGGAAGTGGAAAAACCAAAAATAACTCTTCCAGTTCCCGTAGTTTCTACAATCGAAAGTTCCAATTCCGACACTGTTCCTCCTGTTGTCAGCATCCCGAACACCCCAAACCTCCCAAACCCACCGAACATCCCAATCATTCCCAGTCAGCGCCACCTCTCCATCCCCACAAGAATTCAGCACTTGGTGCGTCCCGTAAACGTGGCAATAGCCAAAATAGCTGAAAAACAGCTGCAGACAACACAAACCGAGCTCAATCAGAGTTTTTCAAAGCAAGGAAAACCGGACATCATCCTCTCGAGTACAGGAATTGCAACAGCCAAGACAACTATTCCCACGAATAGAAATAAAATCAATGCCGATATCAAGGAAATCATAAAGGGCAGAACCGTCAAATCTCCCGAATCATCAATCTCCGATAAATCTACGCAGCAAATACCAAAAATCGATGACGAGCCTGATACAAACAGTGTCAAGGTGACAAGTGATATCGACAAAATATCAACACCATCTGTATCTGATAAGAAAAAGATTCCGACACAAGGACGCAAGCCCTTCGTCTCCAAAGTGAAGGAACGAAAATTATCAATCCCAAATTCCAATGCATTTTCCCCAGAGGACGAAAGTAGTGTTTATGCATTTAAAAACGAAACCGAAGCGCCTCTGAGCACGCCATTTAGGAGAAAATTTCGCGACCAAAAAGCCGAGAGTGCAGGCCTAAAGGAAAGCCCTCAAAAGTGCGAGAGCAAGTCTGACCAAGTATCTAATCAAAATTCTGATGTGAAGACAGATAAAAGTGAGTCAAATCCCATGACAAATGACATGTCCGAGAGCCCCAATCCAACTGTGTTCAAGAATCTTCCGACGATCTGGAACGATTGCAGTACATCTATAGCAGTCCAGATAAACTTCAACGAGAGCTCGGAGTCACCAGGCAATCCATTCTTCCAACTGAAGAACTCCCAGGCTTTAATTGTCGACGACAAGAGCAAAAACTTGAAGGCCTCTGAGAGCACAAGCAATGAAATATCAACTCAAACCGAGAGTTCCAGTGCCAACGAGGACGACAATACAACCCAAGTGTTCTATATTCCCCTGGAGAACGTGGGAAGGAGCATGTCGCACTTGACGAGCCTCCAGGGTCAGCCCTTGATTCAGGGAGTAGCTGTTAAATTGGGGACTGAGGGACCAAATGGTCCCAACCAACGGGTCCTTCTGAGAGCGCAATTGGTGACGAAGCCTCCATTGACTGTTACCAGGTGTCCACCAATTGGCACTGTCCAACCAACAACAAGAACTCCTCAGGGTTCAGATCCCATTCCTTCGACCTCAAGTATTTCCTCGATTCCCCCAAAAATTGGCGAATCTCGCGCTGCAAGCCTTGGCATTCAGGAGGAGGCTGATAAGGCGAAAAAGCCAACGGTGAAGGCTCGAGAGGGCAAAAAGAAAACCTTGGCAGAGTCCAAAAAGGCGCAAGATAAGGACAAACGACAGGATAAACGACTGAAGAAACCGTCGACATCGTCGGACGTAACGTCGTCGTCATTTTCCTCGTCCTCATCACTCCAAGTTCCCTCAGTGAATTCGTCACTGGAATCAGAAGCTCGTCTCAAAGACGCTCCTACGTTTCATCCAACGGAAAAGGACTTCCAGGATCCGTTGGAATATATTGAAAAGATTCGTCCTCTTGCTGAGAAGTTCGGCATTTGCAAGGTCGTTCCTCCCTCCAACTTCAAACCCGAGTGCAAGATATCCGATGACATGAGGTTTACTGCGTACAACCAGTACATCCACCGAATGTTACACCGTTGGGGGCCCAACGTCAAGGAGATGATGGCCATAAAAAAGTATTTAGCTACTCAATCGATAACGCTATCGCAGCCTCCTTGGATCGGTGGAATGGAGGTGGACCTGCCACATTTGTACCAGACTGTGCAGAGCCTAGGCGGCCTCAAGGAGGTTATTGAGAAGAAAAAATGGCAGAAAGTGGCGGACGGCATGAAGATTCCCAAATCCGCCCAGGACAGAGTGACGAAACTCGACGATATTTACTGCAAGTATTTACTGCCCTATGACACCCTCAGTCCCGAGGAGCGAGAGAAGCTTTTTGAAGACGTGGAGACCGAGTGGAGGCGACGAGAAGGCAAGGCTCTGCAGAGGCTCAATGGAACTGTTGCATCTCTGTCTTCAGCTGAGAGCACTGAGGATGAGGATGAGGAGGATAGCTCTGACGAGATCGAGGAGTGCATTGTTAAGGGAAGGAACATGCCATTGAACGCGTTCTATAGGATCGCGCGTAACACCCAAAGGATGTGGTTCGGGGAGAACAATGTGAGGAATCAAGGTAACGAGAGTGAAGCTTCGTCAAGTGATGTGGAGACGGCTTTTTGGCGGCATGTAGCGGAGAGAAAACGTCATGTATGTGTTCATGCGGCGAGCATTGACTCCAGTGGTAGAGGATTCGGCTTTTCGGTTGCTAAGAACAGTCCGTTTGCCCGCCATCCCTGGAACCTCAAGGTCTTGACAAACAATTCTGGATCAGTGCTCAGGGCCCTAGGACCTCTTATGGGCGTGACTATTCCTACGATTCACGTGGGAATGCTTTTTAGCGCCTGCTGCTGGTACAGGGATCCCCATGGGCTGCCCTGGATCGAGTATTTGCATACAGGAGCCAAGAAAATATGGTACGGAATACCAAATGAGTACAATGACCACTTCAGGGAAGCCCTCTCCAAGATGGTCCCCAGATTTTGCAAAAATAAGAAAATTTGGCTGCCCAGTGATACGGCTATGGTGCCACCGGAGATGCTTGCGTCCAATGGAGTACCTCTGTGCAAAATTGTACAAGAACCTGGACAATTCATCATTGTATTTCCAAAGGCTTTTACTTCGAGCATTTGTACGGGATATGTTGTTAGTGAAAGTGTGTACTTTGCGCAGACCACGTGGCTAGGACACGCGGAAGAGATCTTCAAGGACCTCCAGGACAGCTGCGAACCATCAATGTTCTCGTTCGAGAGACTTATGTTCAGTATCGTTAATGACACTAGGTCTCATCTCGATATTTTGAAACAGATACTGCCTGTCATGATGAATATACGAGAGAAGGAATTGCACAATCGTCAGCAGTTGGAGTATTACGGATTGCCTAAAAAAGAAAAACTACCATTGCCGGATAACGGAAAACGAAAGAAAGGTGCTAAAGTGAAGGAGGACGACGGAGACTTTGAGTGCGAGACTTGTCGTACAAATCTCTTCGTTTCACTGGTGCATAATACCCAAGACGATAGCACGTATTGTTTGCCACATGCTCTACAAGTTATCGGTCATAAGAAGCAAATTCTCAAATACTGTATCCTGAAGTATACGTATAGTGAGGATGAATTGGACGATCTGATCCACAAATTGGAGGACCGAATCGAAGCTAAATCAAAGAAAAAGCCCTCAAAACAGTCAGACTAA
Protein Sequence
MVLGRNDKRKRKEGDLVDLMDPASSAPKRAKVHAQRKFAQGVATIFSPGPTLVKEKERPKPALVTELITHKRPNTEDFLTFLCFRGTSILPPSLNFFNQSTKKEKSETKTSRSTSQPSSQRSLPGSSKPNEESPKKSLSTPKTAPQSSSTVSPQTKAKKKLSNVSQNPNIVHKPSNKFKTATSTVQALKKKYKEQRLAKQRIENKIKKTVMKTRSATNRPLLKQSTKIIPSTLVKHIEKKNLSLRSGAVLDRCSPKTPKLLPKTRKKPIKKKIEESESSEESSDAQSTPKRVVKPKSNVKQTPKEKLKTNSLKSKDSGRRVTRSHGEPSQPNQRPSRKTKEAAAVYMEILSRKLVNEDLDNDDNMSLESFPEIPNAKRDATAKKLVTDKKRNVGTKKVNEVEEKSSQKLVRSKRIVKQSKYSDSDDNYSIESDRSSRTPLNVKTRELPRRSANLTKAASRNLRSTVKNVDQKIDKLAKAAKQTASNVKDKRGIKVKRKNDDESSKANPLVKPNEKGQKLLKKKMEEESEEEPLGIVLTRINKAKPTKSPGRRPGKATEPSKKSAPEPVIMIKKINKDTENTPKGSDDEGSFRGFSKISTTNLPSICALKMNSDDMNPGKNGETEAKIETKDCEVPELDGKTAAPQKSPKNEAESGSLVKPAEIVVKEFVQGSKRKSISSEVPAPQSIDKRNFIDVPTLSSLGRKERVNMSTEQIEKWLTESSMVKEESKAEMETAINYPYALEVEKPKITLPVPVVSTIESSNSDTVPPVVSIPNTPNLPNPPNIPIIPSQRHLSIPTRIQHLVRPVNVAIAKIAEKQLQTTQTELNQSFSKQGKPDIILSSTGIATAKTTIPTNRNKINADIKEIIKGRTVKSPESSISDKSTQQIPKIDDEPDTNSVKVTSDIDKISTPSVSDKKKIPTQGRKPFVSKVKERKLSIPNSNAFSPEDESSVYAFKNETEAPLSTPFRRKFRDQKAESAGLKESPQKCESKSDQVSNQNSDVKTDKSESNPMTNDMSESPNPTVFKNLPTIWNDCSTSIAVQINFNESSESPGNPFFQLKNSQALIVDDKSKNLKASESTSNEISTQTESSSANEDDNTTQVFYIPLENVGRSMSHLTSLQGQPLIQGVAVKLGTEGPNGPNQRVLLRAQLVTKPPLTVTRCPPIGTVQPTTRTPQGSDPIPSTSSISSIPPKIGESRAASLGIQEEADKAKKPTVKAREGKKKTLAESKKAQDKDKRQDKRLKKPSTSSDVTSSSFSSSSSLQVPSVNSSLESEARLKDAPTFHPTEKDFQDPLEYIEKIRPLAEKFGICKVVPPSNFKPECKISDDMRFTAYNQYIHRMLHRWGPNVKEMMAIKKYLATQSITLSQPPWIGGMEVDLPHLYQTVQSLGGLKEVIEKKKWQKVADGMKIPKSAQDRVTKLDDIYCKYLLPYDTLSPEEREKLFEDVETEWRRREGKALQRLNGTVASLSSAESTEDEDEEDSSDEIEECIVKGRNMPLNAFYRIARNTQRMWFGENNVRNQGNESEASSSDVETAFWRHVAERKRHVCVHAASIDSSGRGFGFSVAKNSPFARHPWNLKVLTNNSGSVLRALGPLMGVTIPTIHVGMLFSACCWYRDPHGLPWIEYLHTGAKKIWYGIPNEYNDHFREALSKMVPRFCKNKKIWLPSDTAMVPPEMLASNGVPLCKIVQEPGQFIIVFPKAFTSSICTGYVVSESVYFAQTTWLGHAEEIFKDLQDSCEPSMFSFERLMFSIVNDTRSHLDILKQILPVMMNIREKELHNRQQLEYYGLPKKEKLPLPDNGKRKKGAKVKEDDGDFECETCRTNLFVSLVHNTQDDSTYCLPHALQVIGHKKQILKYCILKYTYSEDELDDLIHKLEDRIEAKSKKKPSKQSD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-