Aver002271.1
Basic Information
- Insect
- Asbolus verrucosus
- Gene Symbol
- stc
- Assembly
- GCA_004193795.1
- Location
- QDEB01021008.1:15165-16715[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 8 0.86 4.2e+03 -2.4 2.0 5 10 43 48 43 48 0.93 2 8 0.0018 9.1 6.1 8.3 1 11 54 64 54 66 0.96 3 8 0.81 4e+03 -2.3 1.0 4 10 69 75 68 76 0.62 4 8 4.3e-08 0.00021 21.0 18.4 1 18 81 98 81 99 0.98 5 8 3 1.5e+04 -4.9 3.6 9 15 131 132 127 138 0.54 6 8 0.00023 1.1 9.1 7.9 9 19 145 155 143 155 0.89 7 8 5e-09 2.4e-05 24.0 15.6 1 19 191 210 191 210 0.97 8 8 0.05 2.5e+02 1.6 18.6 1 19 220 239 220 239 0.96
Sequence Information
- Coding Sequence
- ATGTGGCAAACTCCTGAGATGCGGGCAGCCCGCCGCGCCGCACACTTGCAAGCTTCCCTGCCACGAGGGGGACTGCCCCCCGTGCCCCCTGACCACCCTGAAGTAACAACAAAAGCCGACGACGCCCGCTGCGAGAAGAAGTGCACCAAGAAGCGCCTCTGCGGCAAGCACCGCTGCAACCAGCGCTGTTGCATCGAAATGGAGCACATCTGCCCCCTGCCGTGCAACCACCTCCTCGCCTGCGGCCACCACCGGTGCGAGCGCACCTGCCACAGCGGCCGCTGCCACCCGTGCATGGAGACCAGCTTCGAGGAGCTCTACTGCGAGTGCGGAGCGAACGTCCTGTATCCGCCGATCCCGTGCGGGACGAAACCGCCCCACTGCAACAACCCCTGTCCCAGACCGCGCCCTTGCGCCCACGACGTCAACCATTCGTGTCACATCGGGCCGTGCCCCCCGTGCACCGTCTTGTGTAAGCGCTGGTGCTACGGGAAGCACGAGCAGAGGTCGGCGATTCCGTGCTACCAAGAGGCCTTCAGCTGCGGGTTGCCTTGCGGCAAGCAGATGCCTTGCGGGACGCACAAGTGCGAAAAGCCTTGTCATTTAGGTCCCTGTCCTTTGCCTTGTAAGCAGAAGTGTAACATAAAACGCCTACAATGCGGCCATCCTTGTGGCGTTCCTTGTCATAGGCCGCCATGTCCTGAAACTCCTTGTAAGCAAAGCGTGCCTGTTTCTTGTCCGTGCGGGTTGCAGAAGAGCACCAGGCCTTGCATCGAACTTGCCGAAGAGTATAAGGAGTTGGAAATGGCGAATTTGAAGGACAAAATGTCAGATTTGTTGAAGGATCAGCCTGTGGATATCAGCGATATAGTTAACAAGCCTAAAAAGCcgtcagttttgaaaatattGGAATGCAACGAAGAATGTCGGGTCCTCGAACGCAACCGTCGCTTAGCCATCGGTCTTCAAATTCGCAATCCTGACCTAAGCCAGAAGCTCACGCCGCGTTATTCCGATTTCATGCGCGGTTGGGCGAAGAAAGACGCGCAGTTTTGCCAAAAGGTCCACGATAAGCTCACCGAACTCGTCCAATTGGCGAAGCAGAGCAAGCAGAAAAGTCGGTCGTATTCGTTCGAATCTATGAACAGAGATAAGAGGCATTTTGTTCATGAATATTGCGAACATTTCGGCTGTGAAAGTGCCGCTTACGACATGGAGCCCAACAGGAACATTGTTGCTACTGCCATCAAGGACAAGTCGTGGTTGCCCAGCATAAGCCTTCTAGAGTTTATTCAACGGGAGAATGGCCAAAGAAAAGTACCAGGGCCAGTATTAAGTAAAGGGCTGGTAGGCAAATCGGAAACAGTGGCGTTAAAGCTTCCTGGGAGAATGCAAAGATCTTCCACGCCACCTGGAGAAATGgttgattattttgataacCCACCAGTCTAA
- Protein Sequence
- MWQTPEMRAARRAAHLQASLPRGGLPPVPPDHPEVTTKADDARCEKKCTKKRLCGKHRCNQRCCIEMEHICPLPCNHLLACGHHRCERTCHSGRCHPCMETSFEELYCECGANVLYPPIPCGTKPPHCNNPCPRPRPCAHDVNHSCHIGPCPPCTVLCKRWCYGKHEQRSAIPCYQEAFSCGLPCGKQMPCGTHKCEKPCHLGPCPLPCKQKCNIKRLQCGHPCGVPCHRPPCPETPCKQSVPVSCPCGLQKSTRPCIELAEEYKELEMANLKDKMSDLLKDQPVDISDIVNKPKKPSVLKILECNEECRVLERNRRLAIGLQIRNPDLSQKLTPRYSDFMRGWAKKDAQFCQKVHDKLTELVQLAKQSKQKSRSYSFESMNRDKRHFVHEYCEHFGCESAAYDMEPNRNIVATAIKDKSWLPSISLLEFIQRENGQRKVPGPVLSKGLVGKSETVALKLPGRMQRSSTPPGEMVDYFDNPPV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -