Aver011281.1
Basic Information
- Insect
- Asbolus verrucosus
- Gene Symbol
- pnr
- Assembly
- GCA_004193795.1
- Location
- QDEB01103357.1:21913-25057[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.61 1.3e+03 -1.2 0.0 7 14 158 165 157 171 0.80 2 2 3.4e-17 7.2e-14 50.8 4.2 1 34 288 320 288 322 0.98
Sequence Information
- Coding Sequence
- atgaagcaatCCAACGCCGTACTGGAGACGATGATCGACGCCTCAACTTTGATAAAAACCGAAGAAACACCTAACAGTATTACAATCAGCCTCAACACGGAAGTGGAACCAGTGAAAGAGGACCAAAAATCGCACAAAACCGAAATAGTAGACGTAAGATGTGAACCTACCAACGTCCCGTCGCCGATCACATCCTCTTACGTTGCTGAAAGCGGCATGGAAATGGAAACATCGACGATAGCACACAGTCCCAACCAACCCGCAGATTTGTCCAGCAAAAAGCCGGAAAATGTGACGTGCGTTCCCGAAATCGACTTCATCAAGGAAGAAGCCAACGACAACGCATCCGAGTACAGCAACAGCTCCGATCCCGAACGGCTCGAAGTGGACATGTCTCAGGGCGTGGAAGAGCATTCGAACTCGACAACGGCCAGTGCGACGTCACCCATCCCGGAAAACTCCCAACCGGAAGACGAGAGCTCCCTCTGGAGGGCCTTGTCTCACAACGGCTACAACACGAACGTGCCCTTGAGCGGCGAAGCCAGCCAGCTACTCCGAAAGTTAATAACATGTCGGAAGTTGGGCATGAGCATAACTCCAGCGCCCCCGTTCGTACATCTAGACGGCCGCGTTAACTCCCCGAACGAACCCGTCAAGATAGAGGTCAACTCGAAACCGCCGTCGGGCAGGAGAAAACAGAGCTACCCTACCAAAGCGTCCATCGAAGACTTCAGGAGTCCGGGCCGCGACGAAAGCGAAGAATACATCCCGGACTTCACCGGAAACAGCCCATGGTGCAATCTGCAGATCGTCAAGGGTGGCAAAGGCGGGGCGGGCATGGCGCGGAGGGTTGACCTCTCCTGCACGAACTGCGGCACGCAGACGACCACCATCTGGAGACGGAACATGAAAGGAGAGATGGTGTGCAACGCGTGCGGGCTTTATTACAAATTGCACGGAATCGACAGGCCTCACACCATGAGGAGGGACACGATCCACACGAGACGTCGGCGTCCGAAGGCGACCGAGGCCAGAAGCGAAAAGGAGAAATGCAGAGAATATGGCGCTCTCAACAATCAGTTTAAAGCGCCGAAAAAGGGTCACGCCAACGCCGAAACGACAGACACCGAAGATATGCTGAGCGCCCTCAGACGGCAGATACAGCCGCATCTGGTGATGGCGCTGCAAGGACACAAGAACGCCACTTATCCTCATTTACAAGCAGCGAATTTCGCCCAGTTCTTGCCGACGGGAGGGTCGCCCGGTGGATCGGCTCCGGAAGCTGAATCCGATGAAGAAAGCATAGCGGATTTACCGCTGAATCTCGTCTCGACTCAAATGACGGAAACTGAAAGTCATTAA
- Protein Sequence
- MKQSNAVLETMIDASTLIKTEETPNSITISLNTEVEPVKEDQKSHKTEIVDVRCEPTNVPSPITSSYVAESGMEMETSTIAHSPNQPADLSSKKPENVTCVPEIDFIKEEANDNASEYSNSSDPERLEVDMSQGVEEHSNSTTASATSPIPENSQPEDESSLWRALSHNGYNTNVPLSGEASQLLRKLITCRKLGMSITPAPPFVHLDGRVNSPNEPVKIEVNSKPPSGRRKQSYPTKASIEDFRSPGRDESEEYIPDFTGNSPWCNLQIVKGGKGGAGMARRVDLSCTNCGTQTTTIWRRNMKGEMVCNACGLYYKLHGIDRPHTMRRDTIHTRRRRPKATEARSEKEKCREYGALNNQFKAPKKGHANAETTDTEDMLSALRRQIQPHLVMALQGHKNATYPHLQAANFAQFLPTGGSPGGSAPEAESDEESIADLPLNLVSTQMTETESH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01410452;
- 90% Identity
- -
- 80% Identity
- -