Basic Information

Insect: Asbolus verrucosus
Gene Symbol: RREB1
Assembly: GCA_004193795.1
Location: QDEB01043341.1:1515-10191[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 5.7e-05 0.0029 17.7 0.6 1 23 83 105 83 105 0.99

2 16 0.0012 0.063 13.5 0.2 1 23 116 138 116 138 0.96

3 16 0.00021 0.011 15.9 6.2 1 23 144 166 144 166 0.98

4 16 0.41 21 5.6 0.0 1 21 226 247 226 250 0.77

5 16 0.029 1.5 9.2 3.5 2 23 256 278 256 278 0.97

6 16 5.2 2.7e+02 2.1 0.9 1 19 323 341 323 344 0.84

7 16 0.073 3.7 7.9 0.1 1 23 477 499 477 499 0.96

8 16 8.2e-06 0.00042 20.4 0.8 1 23 508 530 508 530 0.99

9 16 0.00084 0.043 14.0 3.1 1 23 536 559 536 559 0.97

10 16 0.0005 0.025 14.7 3.0 1 23 951 974 951 974 0.97

11 16 0.00021 0.011 15.9 0.5 2 23 1193 1214 1192 1214 0.97

12 16 0.13 6.4 7.2 6.3 1 23 1220 1243 1220 1243 0.97

13 16 0.013 0.64 10.3 1.2 1 20 1271 1291 1271 1292 0.95

14 16 0.38 19 5.7 0.7 1 23 1351 1374 1351 1374 0.92

15 16 0.017 0.85 9.9 0.4 3 23 1421 1441 1419 1441 0.93

16 16 0.0076 0.38 11.0 5.9 1 23 1447 1469 1447 1469 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	5.7e-05	0.0029	17.7	0.6	1	23	83	105	83	105	0.99
2	16	0.0012	0.063	13.5	0.2	1	23	116	138	116	138	0.96
3	16	0.00021	0.011	15.9	6.2	1	23	144	166	144	166	0.98
4	16	0.41	21	5.6	0.0	1	21	226	247	226	250	0.77
5	16	0.029	1.5	9.2	3.5	2	23	256	278	256	278	0.97
6	16	5.2	2.7e+02	2.1	0.9	1	19	323	341	323	344	0.84
7	16	0.073	3.7	7.9	0.1	1	23	477	499	477	499	0.96
8	16	8.2e-06	0.00042	20.4	0.8	1	23	508	530	508	530	0.99
9	16	0.00084	0.043	14.0	3.1	1	23	536	559	536	559	0.97
10	16	0.0005	0.025	14.7	3.0	1	23	951	974	951	974	0.97
11	16	0.00021	0.011	15.9	0.5	2	23	1193	1214	1192	1214	0.97
12	16	0.13	6.4	7.2	6.3	1	23	1220	1243	1220	1243	0.97
13	16	0.013	0.64	10.3	1.2	1	20	1271	1291	1271	1292	0.95
14	16	0.38	19	5.7	0.7	1	23	1351	1374	1351	1374	0.92
15	16	0.017	0.85	9.9	0.4	3	23	1421	1441	1419	1441	0.93
16	16	0.0076	0.38	11.0	5.9	1	23	1447	1469	1447	1469	0.98

Sequence Information

Coding Sequence: ATGCAAGGGGTTGTCTTCATGCCTCAGAATCCACAGCAGGGGTCGCCGCCGCCAAATAACACTTTAGTTACCGACATTACGATGGAGGTAGATCCTGACCAGACGACCAAAGACAAGCTGATCGCCAACCAAAGCAACCAGAGCGACTCGGGCATCTTCTCCACCACCAACAACTCCAACACGACGACCAACTCGGAAAACTGCGACGCCGACGACCGGAGCGACTGCAGCTCCCCGGAGCGGAAGTACGTCTGTCCGATCTGCGAGACGGTGCTGACGTCGCAGCACGAGTTCACCCTCCACATCAGATCGCACAACAACGAGTCTGAGGTGCAAGAGAAGGGCTTCGCCTGCCGCATCTGCTTCAAGGTGCTGAGCTCCAGCTCCAGTCTGGACCGCCACGTCTTGGTACACAGCGGCGAGAGGCCCTTCCACTGTCGCTACTGCGGGGACACCTTCACCACCAACGGCAACATGCACAGACACATGAGGACCCACACCCACAAGAACGACAACTACGAGTCCGACGGCAGTTCCGACAGCAACATCAGCAGCAGCTCCAGAAGCATCGAATACAACAACAACAAGATCGATTCAAAGAAGAGGAAGCTGGAGGCCTCGGACCGGGCCAGCAAGAGGCTGGAGAACTCGAGCGATGCGGAGGCTCAACAGTTCTACAAGTGTCCAGTTTGCGACAGAACCGATTTCGACTCGATCGTGGCGTTGGAAGCACACTTGGAAGACAATCACCCAGACTATCCGGCGAAATGCAGCCAATGCCACCAGCTCTTCCAGAACAACAAACTCTTGACCGTCCACCGCAACACTGTCCACAACAGCGCGAAGAAACACACGGTGGCCGGTTTCAAAGACTTGACCTTCGTGGACTTCTCCAGCGAGAAGTTCCCGCACATAGCTCGCTACGAGTGCGAGAAGAATCTGCACACTGCTTCCGACGGTCTGAGTTTTCAGTGCAAAACCTGCCTCAGAGCCTTCCCCTGTACAAACTCCCTGGAAATACACGAGAAAGATTGCAGCGCCTACACCAACGGCCTCGACCTCAGCAAAAGCACTCAGTTGTCGGAGACGGAAATCAGAAGGAACGAATTCTTCTCCAGACTCAACCTGCAAGACAACTCGCCCGAAAAATTCGTGCCGCCACCTCAAATCAACGAGACTTCCACCAGGCTGAGGCAACAGCTGCTGGCCAAAGTGATGACGAACGATTCCACCAAAGACCTCGCCGACATCCAGTCCATCATCTCGATGACCACCAACGGGAGTCTCCTCCAGCAGCTGCAGGCCAAGAGCGAAGTGAGCCTCCCCAACCCCAAGCCTCTCGATCCTTCCCAAGAGAGATCAGAACAAGAGGAAGAATCTCAAGATTTGTTCGCGGTGGAATTCAGGAAGATGAAACTGAGAGGGGAGTTTCCCTGCCGCTTGTGCACGGCAGTCTTCCCGAATCTGCGAGCTCTGAAAGGACATAACCGCGCCCATCTCAACGGGAACAACAACGGGATGTACAGGTGCAACATGTGTCCACATTCCTCCATAGATAAGGCCGCTTTAATCAGACACATGCGCACGCATAACGGCGATCGACCGTACGAGTGCTCGCTCTGCAATTACGCGTTTACCACCAAAGCCAACTGCGAGAGGCATTTGCGGAACAGGCACGCCAAAACCACGAGAGAAGAGGTGAAGAAGGCCATCATCTACCACCCATCCGAAGATCCAACCAATGAAGATTTGAACAAACTGACTTCCAGGGAAGAAATCAGGAAACCCAACACTGCAGACTTGAATCCGGAAAAACTACACTGCGCCACTCCGAAGCTTTCAGAACTGCGCAACATGATCCCGGACATGAACAAACCGGAAATGGCGCCGCTGATCCCAAATTTGCTGAAAGAAACTCTGAACGTGCCCATTTCGAAGGAGCCCTCGAAAATGTTCTCGAATATCAGTGATATTATTCGTagcgaaaatttgaaatctctCAAAGATCACAGGCTCCAGAACGGGCAACTCTCGCCATATCTGCAACCGTCTTACAGCTTCTCTCCCAAGACGTCCAATGTTTCCACTCCTCACAACCTCTCGACCAAGATCCAGGTGAAAAATCTGGAGGATTTGAAAGAGGCGACTTACGACCGCCAGTCAGATGAGGAATGTACGGAGCAAGAGGAAGAACCCATGAACCTAGTCCTGGACTTGAGCAAAAAGAAGAGCAACGAAGAGAAGAAAGTGAAGGGGGAGACCATGCCACAAGACCTCTCCAAAAAGTCATCGCCGACTCCCCCGATCAATGTGCGCGAGTTGTTCACTCAGCAGCTGCTGAAGAGTCCCCCAAAAATCGACCCAGCAGCGTGGTACGCGAGTCAAATCGCTCTGTACAGAAATAGCTTCCCCGGGTTTACCGGTTGGCCCGGTTTGCCCATCAACCCTCTGCTGTTCCAGTCGCTGCAAACCCCGCTCCTCCCCCAAGAGTCGCAAGATATCAAGGAAAGACTCCAGAGATACCAGCTTTGCGGCGGTTCCATGATCACTGATAATTTCGCGGAGAGGTTAAAAAACTTCCAGAATCCTGCGAACCCAGccttcaacaatttcaaagtgACCGACTTGAAACCCGAGCTGAAGCAAGAAAGCAACTTCAACCCGAACACCGAAGAGATGAAACCGTTGACTCTGAACATCGATACTGCTTTCAGCGACAACTTCGGCAAGCTGCAGAGCCCGCAGCAGAAACCAGACTTGACCCAGTCGCCAAACTCGGTCAAGATGGTGATCAAGAACGGGGTTTTGATGCCCAAGCAGAAGCAGAGGAGGTACAGAACCGAAAGACCCTTCACGTGCGAACACTGTTCGGCCAGGTTTACGTTGCGCTCCAACATGGAGCGGCACATCAAGCAGCAGCACCCTCAGTTTTGGTCGCAGCGCCAAAGAGGCCACATCAGCAATCCCGGAAGGAAGAGTCAAACCATAAAGACGAACTATTGTGATCTCAGCATACCAAACTACGAAATACCAAAGACGCAAGATTTTGAAGATACCAAAGAACGGATCGacgaaaaactgaaatttgctATTTTGGCGCAACATCTGCGAGCGAACCAATCGAATTTGAAGCCGGAGATTAAGAaggacgacgacgacgactgCGCTCTTGTTATCGACGAGAACGCCGGCAAAAGCGAATTTAAGACTGAAGAAAGCAACCAAAGAAACTTCGATACTTTCGAGAGGAGTCGAATTCTGGAAGAGAAGCTTCGAGAATTGCACGCCAAGCAAATTAAGTCTGAAAGCAAAAGCAAGAACGAAGAGAACCAAGATTTGGTGCCCGTTTCCAGGCTTCTGGACAACGCCTCTCAGCAGCAGTTTAAGGAATACTTCAAGCGAGAAGGTGAAGAACCCGAAGTTGGAGGAGCCAGCGAGGAAGATGAAGAAGGGTTGGTCGCCAGTGGGAGCACAAGCGAAGGCAATGTCTCGGGCACGGATGAAAACAAATCCGAATCCGAAGTTGCAGCTCCGGTCAAGAAGAAATCCGCCTACTCCATGGCCCCCAATCGAGTGAGTTGTCCGTTTTGCAACCGAAAGTTCCCGTGGAGTTCGTCTCTGCGCCGCCACATCTTAACCCACACTGGTCAGAAGCCTTTCAAATGCAGCCATTGTCCTTTGCTTTTCACCACCAAGTCCAACTGCGACCGGCACTTGCTGAGGAAGCACGGCAACAACGCCACCACCATCAGCAACGACGTTGCCAACAATAACACCAACTACTTGATGAGGAACGTACCGGAAAGACCCTTCAAGTGCTCCAACTGCCCCAGCAGCACCTTCTCCACTTACTCCAACTTGAAGAAGCACATCAGCTGCAAGCACTCCACCAACGCGCAAGGCGACGACATCAAGGCTCAGGGTTACGAGGCCGGCAGCTCCGAAGACGAAAAACTGCCGTCAAACAGCGACCTCAAGAGCGACTGGGACAGCCAAGTGGCCAAATCCGGGGGCGAAGTGCAAAATGTCGCCCAGAACTCGGACTTGCCGTTCAAGTGTCATTTGTGCGACGGCTCCTTCGGCGAGCGCCAAGACGCCCTGGACCACATCAAAGACAGGCATTTCAGCGAATACGAGCTGCTGATGTCGAAGAACGCGCTGGACAGCAACGCCACCACTCCGGACGACGGCGGCCACCACGAAGACGAAGAAAACGACATGAGGGGCAAGTTCCCCGACTACTCCAACAGGAAGGTGATCTGCGCGTTCTGCATGCGCAGGTTTTGGTCCGCGGAGGACTTGCGGAGGCACATGCGCACTCACACAGGTGAGAGGCCTTTCAGCTGCGACATTTGCAGGAGGAGGTTCACGCTGAAGCACAGCATGCTGCGCCATCGGAAGAAGCACAACGTGAACTTCGACAGTGAGGTTGTTAACAGCGACGAGGACGTCAACAACGGACCGGCCAATTTCGAGAAATTCACCAAGAACGAGAACAATAACATGACACATAaggaaaaaactgaagaatcaGACGGGAACGAAGGGAGtgatttaattagtaatttactGGGGATCAGGGATAGGTCTTTTATCGATAAGGTACTTACGGCATCTGCTGACGATGCTGCTAAATTATTAGGGGTCAAAAACGGAGTTAGagaa
Protein Sequence: MQGVVFMPQNPQQGSPPPNNTLVTDITMEVDPDQTTKDKLIANQSNQSDSGIFSTTNNSNTTTNSENCDADDRSDCSSPERKYVCPICETVLTSQHEFTLHIRSHNNESEVQEKGFACRICFKVLSSSSSLDRHVLVHSGERPFHCRYCGDTFTTNGNMHRHMRTHTHKNDNYESDGSSDSNISSSSRSIEYNNNKIDSKKRKLEASDRASKRLENSSDAEAQQFYKCPVCDRTDFDSIVALEAHLEDNHPDYPAKCSQCHQLFQNNKLLTVHRNTVHNSAKKHTVAGFKDLTFVDFSSEKFPHIARYECEKNLHTASDGLSFQCKTCLRAFPCTNSLEIHEKDCSAYTNGLDLSKSTQLSETEIRRNEFFSRLNLQDNSPEKFVPPPQINETSTRLRQQLLAKVMTNDSTKDLADIQSIISMTTNGSLLQQLQAKSEVSLPNPKPLDPSQERSEQEEESQDLFAVEFRKMKLRGEFPCRLCTAVFPNLRALKGHNRAHLNGNNNGMYRCNMCPHSSIDKAALIRHMRTHNGDRPYECSLCNYAFTTKANCERHLRNRHAKTTREEVKKAIIYHPSEDPTNEDLNKLTSREEIRKPNTADLNPEKLHCATPKLSELRNMIPDMNKPEMAPLIPNLLKETLNVPISKEPSKMFSNISDIIRSENLKSLKDHRLQNGQLSPYLQPSYSFSPKTSNVSTPHNLSTKIQVKNLEDLKEATYDRQSDEECTEQEEEPMNLVLDLSKKKSNEEKKVKGETMPQDLSKKSSPTPPINVRELFTQQLLKSPPKIDPAAWYASQIALYRNSFPGFTGWPGLPINPLLFQSLQTPLLPQESQDIKERLQRYQLCGGSMITDNFAERLKNFQNPANPAFNNFKVTDLKPELKQESNFNPNTEEMKPLTLNIDTAFSDNFGKLQSPQQKPDLTQSPNSVKMVIKNGVLMPKQKQRRYRTERPFTCEHCSARFTLRSNMERHIKQQHPQFWSQRQRGHISNPGRKSQTIKTNYCDLSIPNYEIPKTQDFEDTKERIDEKLKFAILAQHLRANQSNLKPEIKKDDDDDCALVIDENAGKSEFKTEESNQRNFDTFERSRILEEKLRELHAKQIKSESKSKNEENQDLVPVSRLLDNASQQQFKEYFKREGEEPEVGGASEEDEEGLVASGSTSEGNVSGTDENKSESEVAAPVKKKSAYSMAPNRVSCPFCNRKFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNNATTISNDVANNNTNYLMRNVPERPFKCSNCPSSTFSTYSNLKKHISCKHSTNAQGDDIKAQGYEAGSSEDEKLPSNSDLKSDWDSQVAKSGGEVQNVAQNSDLPFKCHLCDGSFGERQDALDHIKDRHFSEYELLMSKNALDSNATTPDDGGHHEDEENDMRGKFPDYSNRKVICAFCMRRFWSAEDLRRHMRTHTGERPFSCDICRRRFTLKHSMLRHRKKHNVNFDSEVVNSDEDVNNGPANFEKFTKNENNNMTHKEKTEESDGNEGSDLISNLLGIRDRSFIDKVLTASADDAAKLLGVKNGVRE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01568293;
90% Identity: -
80% Identity: -