Basic Information

Insect: Asbolus verrucosus
Gene Symbol: salm_1
Assembly: GCA_004193795.1
Location: QDEB01105440.1:11859-18713[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 2.7 1.4e+02 3.0 0.1 2 19 14 31 13 33 0.90

2 10 5e-06 0.00025 21.0 0.9 1 23 322 344 322 344 0.98

3 10 6.9e-06 0.00035 20.6 1.9 1 23 350 372 350 372 0.98

4 10 0.063 3.2 8.1 3.8 2 23 682 703 681 703 0.98

5 10 4.3e-08 2.2e-06 27.5 0.6 1 23 709 731 709 731 0.97

6 10 6e-05 0.0031 17.6 2.6 1 23 741 763 741 763 0.98

7 10 0.0091 0.46 10.8 2.4 2 23 1024 1045 1023 1045 0.97

8 10 0.053 2.7 8.4 0.9 1 14 1051 1064 1051 1065 0.93

9 10 1.4e-06 7e-05 22.8 4.0 3 23 1207 1227 1205 1227 0.96

10 10 2e-07 1e-05 25.4 0.9 1 23 1233 1255 1233 1255 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	2.7	1.4e+02	3.0	0.1	2	19	14	31	13	33	0.90
2	10	5e-06	0.00025	21.0	0.9	1	23	322	344	322	344	0.98
3	10	6.9e-06	0.00035	20.6	1.9	1	23	350	372	350	372	0.98
4	10	0.063	3.2	8.1	3.8	2	23	682	703	681	703	0.98
5	10	4.3e-08	2.2e-06	27.5	0.6	1	23	709	731	709	731	0.97
6	10	6e-05	0.0031	17.6	2.6	1	23	741	763	741	763	0.98
7	10	0.0091	0.46	10.8	2.4	2	23	1024	1045	1023	1045	0.97
8	10	0.053	2.7	8.4	0.9	1	14	1051	1064	1051	1065	0.93
9	10	1.4e-06	7e-05	22.8	4.0	3	23	1207	1227	1205	1227	0.96
10	10	2e-07	1e-05	25.4	0.9	1	23	1233	1255	1233	1255	0.98

Sequence Information

Coding Sequence: ATGTCGCTAGCGTCGTCGCAAGTCCTCCCGGAAGTCCTCATGTGTCAGCGGTGCCAAGAGCAGTTCACCGACGTCCAAGAATACCTGACGCACAAGGCCGAATGCGAGAAGAAGGCCATCAAGCACGACGACCCGGCCCATTCCGACCCCGAGGACATGGTGGTCTCTGAAGAAGACGACGAGGATGACGACGCCGGCGGCAAGCGTCTGGAGCGGATGCGCCGTCATCGACAGGACGCCGCCAACAACAACAGCGTCGAAGAGAACCCCGAGACCGGTCCCAGGCTAACCTTCCCCTTCCCGGTGCCCTCGGCACCTGGACACGTCACCTTGGAAGCGCTCCAGAACACCAAAGTGGCAGTCGCGCAGTTCGCAGCCACCGCCATGGCCAACAACACCGACAACGAGGCGGCTCTGCAGGAACTGGCGGTGTTGCAGTCCACCCTCTTCACGCTGCAGCACCAGCAAGTGCTGCAGCTGCAGCTCATCAATCAGTTGCAGCAACAGTTGCAGATCGACAGGTCGAAAGCTGCTAGTCCTGTCTCGCCACCTCCCTCCGAGAACGAGGGGGAGAGCGCCCCGACGGAGGCTTCGCCTCCTCCGCAGAATCTCCCGGTTTCGAGAGAACCGACGCCAGCGCCGCCACAACCCTCAGCACCGGCACCAGAATCTTCTGAGAATCAAATGACTGAAGTTAACGTTCCTTGCTCTCTACCTCTTCAATCGCATCATTGTTCCATATCATCATCACTAGCTTCGACTATTATCACCCACAATAACGACCCTCCATCGCTAGACGAGCCGAATACGTTGGAGATGTTGCAGAAGAGAGCCCAAGAAGTGTTGGATAACGCCAGTCAAGGGTTGTTGGCTACCAATTTAGCTGACGAGTTGGCTTTTAGAAAAAGCAAAGGGTCTTTATCGCCCTACGATTCCAAAGGGAGAAACGAGCCCTTCTTCAAGCATCGCTGTCGATATTGTGGTAAAGTCTTCGGATCCGATTCAGCCCTGCAAATACATATCCGTTCTCACACCGGAGAACGCCCTTACAAGTGCAATGTTTGTGGTAGTCGATTTACCACCAAAGGTAACTTGAAAGTACATTTTCAAAGACATAGTGCAAAGTTCCCTCATATCAAAATGAATCCTAATCCGGTACCGGAACATCTAGACAAGTATCATCCGCCTCTTCTAGCTCAATTAGGACAGCAACCTTCACTCTCACCGGGAGGCCCTCCACATCCCCCTCATCTGTCTTTCCCGGGTGGCCACCCGTTCCCTCCAACCTCTTTACCTCTGTACCGACCTCACGGACCGCCTCCTCcagatttgataaataatagaCTGCAACCATCGCCGCACCGACCGCAAGACCCTTCCCAAAGACTCTTCCCTCCTCACCCTCTCTTCATGAAGCGAGAAGAGCAAGAAACTCCCGAGAATCTCAGCAAACCCCCAAGATCTCCAACACCGGTGCAAGATCAATGTAAGTCGGAAGTTTCAGAAGAAAAGCGCCATTTCAGCGAAGACTTACCCTCGAATGTTCCTCAAATAACACCAAAACAAGAGCCAAATGATGTCGATAACGATCAAGAGCACGAACCAGAAAGATACTCTTCTCCCGCCCCCTACGATGAATGCAGTATTGACAGCAAATACAGCAACGAAGACATGTTGGGGCAAAGAAGTCCGGGGGTGGATCACTCGGAAAACATGCAGGACGAACCGGAAAATCTCTCGAACAAAAGCAATTCCATAACAGTTCCTTTGAGTATTTCAACGGGTCAGAGGTTGCCCGCGAACTTCACCTTCGGGCAGGTGAGCTCGCCCCCCAGCAGCACCTCCTCGGGGAGTCTGGGCCCGTTCCCCACCACCCCCCTGGTGGACCCAGCCAAAGACCCCGCCATCTACTCGAACCTGCTGCCTCGGCCCGGAAGCAACGACAACTCTTGGGAGAGCCTGATCGAGGTGACGAAGACGTCGGAAACCAGCAAGCTGCAGCAGCTGGTGGACAACATCGAGCATAAACTGTCGGATCCGAACCAGTGCGTGATTTGCCATCGAGTGTTGTCGTGCAAAAGCGCCTTGCAGATGCACTATCGAACTCACACCGGAGAGCGGCCCTTTAAATGTAAGATTTGCGGTCGCGCCTTCACCACCAAGGGCAACCTGAAGACGCACATGGGGGTGCACCGAGCCAAGCCCCCGATGCGCGTCCTGCACCAGTGTCCCGTCTGCCACAAGAAGTTCACCAACGCTCTGGTCCTCCAGCAACATATCCGCCTCCACACGGGCGAACCCACTGATCTCACGCCGGAGCAGATCCAAGCGGCCGAAGTCAAAGACTTCCCGTCTCCGGGAGGATTCCCGTCGCTCCACAATTCCATTAATCCATTCCTAGGGCAGGGATTCGCCGTGCCGGGGCTCTCGCCCCTGGGGCACGGGCTCTCGATGAACCACAAGTTCGAGAAGTTCGACAAGGACGAGCACGAGTCCATGGACGaagacgacgacgacgacgacgaaaTCAGCAATTccgaaaatcaaaatccgcCGTTTTCGTCGTCTCCTTCGGACATGCAGGGAGCTCCCACCAGCATGGCCTCGCAGCTGTCGCAGCTGAGCTGCTCGGCGGAGGATTTGTGTTCGAACAGAACTGCGGCGTCCACTTCGCCCATGCAGAACGGCGAGAAGTCGCCCTGCCAGTCGGGGATCACGAGTCCAGGAAGCTCGGACATCAGGTCGTCTCCCAACAGAGTTTCAACAACACCCGTCCAGGTTCCACGTCCACCCTCATCTCAGCAAGCCGGCAGTCCGACTCCCTCCGAATGCAATTCCCTGGGAGCTCTAGACCTGACTCCCCGAACGAACCAGCCGCTGATAACCAGCCCAGGCCCGAGTCCTGGCCCTCCTCCGTCGCTCTTCTCGACCTTCGGGTTGCTGCCACCAGGTCAAAGTTCCACGCCGCTGATGTCGTCTGCTCTCTCGTCGCTGACTTCGTCGGTTTTGACTTCGACGGCCTTCAGTCCGCTGCGTTTGGCGGTGGGTCCACCAGGACGTGGGAATACCACCTGTAACTTGTGTTTCAAGACTTTCGCCTGCAATTCGGCCTTGGAGATCCACTACAGAAGTCACACGAAGGAGCGCCCTTTCAAGTGCAGCGTCTGCGACAGGGGCTTCTCGACGAAGGATGGATGTGCATGCAGAGAGAGGCGTATCCAGGATGAAGCGGAGCCGTGGAGGGCACGCAAACGGAAACCTGCCCCCCGCAAGTCTATTCCATCGGTACTTCCGCTACCGATGAGCCCTGGATACGCCTCAAACTGGATGCATATCGCGGGTAATATGAAACAACACATGCTTACGCATAAGATAAGGGATATGCCTCAACACATGTTTGAGAATAAGCCTCCGATAAGCGGAGACGAATCTTCGCAGCAACCGCCTCAGAACTTGCCTCAGAGGGAGGCTCAACCGTCTGAGAACGAACAATCGCTTCCGCCTCCACAGCCTTCCGCGTCGGAACAGAGCAAAGAACAGCCAGTTAAGAGGGAACCGACTGAGACTGAATTGCCCTTGCCCAAACGTCCACCCAGCTTACAGGCCAGTAAGCACTTGTGCCACGTATGCAATAAGAACTTCTCGTCCAGCTCGGCCTTGCAGATACACATGCGTACGCACACGGGCGATAAGCCGTTCAGATGCACCGTGTGTCAGAAGGCCTTCACCACCAAGGGGAATCTCAAGGTACATATGGGCACCCATATGTGGAGCAACGGAGCGTCGCGACGCGGCCGACGCATGTCGCTAGACCTGCCGCCCATCCCCATGACGCCCAAGGATTCAGAATTTCTGCAACGGAGGCCAGACCTTTTCTATCCGTACCTACCGGCTCCATTCCTTAACGGCATGCAGCAGAAGCTGAACGAAATGTCAGTGGTCCAGAATAACCAGAACGGGATGGCCGGAGCGGGCAAGTACAGCGGCCTGCTGGGGTTCGGCTACCCGCCGCCGGAGGCGCTGCGGTCGCAGGGTGGTTCCCCGGAGCGACCCGAGAGGCCGCCGAGTCGCGACCCGGAGTCCCGGAGCCTGTGGGACCTCCACTTCGAGCGCAAGTCGGCTCCGGAAGCGCCCCGAGAGGAGCTGCTGCCAGCGAGCAGAGAGGGTTTAGCCGCC
Protein Sequence: MSLASSQVLPEVLMCQRCQEQFTDVQEYLTHKAECEKKAIKHDDPAHSDPEDMVVSEEDDEDDDAGGKRLERMRRHRQDAANNNSVEENPETGPRLTFPFPVPSAPGHVTLEALQNTKVAVAQFAATAMANNTDNEAALQELAVLQSTLFTLQHQQVLQLQLINQLQQQLQIDRSKAASPVSPPPSENEGESAPTEASPPPQNLPVSREPTPAPPQPSAPAPESSENQMTEVNVPCSLPLQSHHCSISSSLASTIITHNNDPPSLDEPNTLEMLQKRAQEVLDNASQGLLATNLADELAFRKSKGSLSPYDSKGRNEPFFKHRCRYCGKVFGSDSALQIHIRSHTGERPYKCNVCGSRFTTKGNLKVHFQRHSAKFPHIKMNPNPVPEHLDKYHPPLLAQLGQQPSLSPGGPPHPPHLSFPGGHPFPPTSLPLYRPHGPPPPDLINNRLQPSPHRPQDPSQRLFPPHPLFMKREEQETPENLSKPPRSPTPVQDQCKSEVSEEKRHFSEDLPSNVPQITPKQEPNDVDNDQEHEPERYSSPAPYDECSIDSKYSNEDMLGQRSPGVDHSENMQDEPENLSNKSNSITVPLSISTGQRLPANFTFGQVSSPPSSTSSGSLGPFPTTPLVDPAKDPAIYSNLLPRPGSNDNSWESLIEVTKTSETSKLQQLVDNIEHKLSDPNQCVICHRVLSCKSALQMHYRTHTGERPFKCKICGRAFTTKGNLKTHMGVHRAKPPMRVLHQCPVCHKKFTNALVLQQHIRLHTGEPTDLTPEQIQAAEVKDFPSPGGFPSLHNSINPFLGQGFAVPGLSPLGHGLSMNHKFEKFDKDEHESMDEDDDDDDEISNSENQNPPFSSSPSDMQGAPTSMASQLSQLSCSAEDLCSNRTAASTSPMQNGEKSPCQSGITSPGSSDIRSSPNRVSTTPVQVPRPPSSQQAGSPTPSECNSLGALDLTPRTNQPLITSPGPSPGPPPSLFSTFGLLPPGQSSTPLMSSALSSLTSSVLTSTAFSPLRLAVGPPGRGNTTCNLCFKTFACNSALEIHYRSHTKERPFKCSVCDRGFSTKDGCACRERRIQDEAEPWRARKRKPAPRKSIPSVLPLPMSPGYASNWMHIAGNMKQHMLTHKIRDMPQHMFENKPPISGDESSQQPPQNLPQREAQPSENEQSLPPPQPSASEQSKEQPVKREPTETELPLPKRPPSLQASKHLCHVCNKNFSSSSALQIHMRTHTGDKPFRCTVCQKAFTTKGNLKVHMGTHMWSNGASRRGRRMSLDLPPIPMTPKDSEFLQRRPDLFYPYLPAPFLNGMQQKLNEMSVVQNNQNGMAGAGKYSGLLGFGYPPPEALRSQGGSPERPERPPSRDPESRSLWDLHFERKSAPEAPREELLPASREGLAA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01330030;
90% Identity: iTF_01410203;
80% Identity: -