Basic Information

Insect: Asbolus verrucosus
Gene Symbol: -
Assembly: GCA_004193795.1
Location: QDEB01101496.1:24410-26168[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0012 0.062 13.5 1.1 1 23 86 108 86 108 0.98

2 16 0.0054 0.27 11.5 2.3 2 23 114 135 114 135 0.98

3 16 1.7e-06 8.5e-05 22.5 1.5 1 23 141 163 141 163 0.99

4 16 5.8e-06 0.00029 20.8 3.3 1 23 169 191 169 191 0.98

5 16 0.0075 0.38 11.0 2.6 1 23 197 219 197 219 0.98

6 16 4.3e-05 0.0022 18.1 1.0 2 23 226 247 225 247 0.96

7 16 5.6e-05 0.0028 17.7 0.4 1 23 252 275 252 275 0.98

8 16 0.00035 0.018 15.2 0.3 2 23 279 300 279 300 0.97

9 16 3e-05 0.0015 18.6 1.5 3 23 308 329 307 329 0.96

10 16 7.5e-06 0.00038 20.5 1.2 1 23 336 358 336 358 0.98

11 16 3.2e-06 0.00016 21.6 2.4 1 23 362 384 362 384 0.97

12 16 6.2e-06 0.00031 20.8 3.5 1 23 390 412 390 412 0.98

13 16 0.0058 0.29 11.4 3.2 1 23 418 440 418 440 0.96

14 16 7.6e-05 0.0038 17.3 1.5 1 23 446 468 446 468 0.98

15 16 0.0033 0.17 12.2 5.7 1 19 474 492 474 498 0.93

16 16 0.18 9.1 6.7 2.4 1 23 507 530 507 530 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0012	0.062	13.5	1.1	1	23	86	108	86	108	0.98
2	16	0.0054	0.27	11.5	2.3	2	23	114	135	114	135	0.98
3	16	1.7e-06	8.5e-05	22.5	1.5	1	23	141	163	141	163	0.99
4	16	5.8e-06	0.00029	20.8	3.3	1	23	169	191	169	191	0.98
5	16	0.0075	0.38	11.0	2.6	1	23	197	219	197	219	0.98
6	16	4.3e-05	0.0022	18.1	1.0	2	23	226	247	225	247	0.96
7	16	5.6e-05	0.0028	17.7	0.4	1	23	252	275	252	275	0.98
8	16	0.00035	0.018	15.2	0.3	2	23	279	300	279	300	0.97
9	16	3e-05	0.0015	18.6	1.5	3	23	308	329	307	329	0.96
10	16	7.5e-06	0.00038	20.5	1.2	1	23	336	358	336	358	0.98
11	16	3.2e-06	0.00016	21.6	2.4	1	23	362	384	362	384	0.97
12	16	6.2e-06	0.00031	20.8	3.5	1	23	390	412	390	412	0.98
13	16	0.0058	0.29	11.4	3.2	1	23	418	440	418	440	0.96
14	16	7.6e-05	0.0038	17.3	1.5	1	23	446	468	446	468	0.98
15	16	0.0033	0.17	12.2	5.7	1	19	474	492	474	498	0.93
16	16	0.18	9.1	6.7	2.4	1	23	507	530	507	530	0.95

Sequence Information

Coding Sequence: ATGGAAGAGTGCACCTCCTCGCCGGACAGTTTAAACAGCAGTTCCGACGACCCGAAATCGAAAAATTCGAGTTCCCACAGGGACGCGGTGTGCGTGAAGCAAGAACAAGATTATTTCTCTAGTCCGGGGGGCGAAGACTTCGACCTGAAACTGATCAAAAGCGAGGATTTCGTCAAGAATGAAGACTGCGGCGCTGCGAGGCCGGGTTCCCACAAACTGTCCGAAGGGGGTGTCACCGACAACGAGACGACGGTTTACAAGTGTAACATATGCTCGGAGGACTTCAGGGTCTTCGTGGAGTATCGTGCGCACAGGAAGCAGCATTTCGTCGAGAAGAGGACGTGTAAAGTGTGCCGAACAGTGTGCCAAAGCATCAGCAAGCTGGAAATTCACATGAACACGCACCTGGGGCTCAAGCCGTACAAGTGCACGCAGTGCGGGAAGAATTTCGTGTCGAATAACCAGCTCAAGCTGCACGGGAGGAGCCACTCGGATGAGAAGAGGTACTCGTGTAAGAAGTGCACGAAAGCATTCCGGCATCTAGGGTCCCTGAGGAGCCACATGGTCACCCACAACAACATCAAGGAGTTCCAGTGCAAGAACTGCGGCGACAGCTGCCCCAACCTGCAGTCCTACCGCAAACACCTCGAATCCCACGGCCAGCGGATCGAGATCAAGTGCGAGCTGTGCAACAAGGTCTTCCCGACCGACCGCCACCTGCAGACCCACCTGAACGCGCACACCGAGCTGCAGTACCCGTGCGAGTACTGCGAGCGCATCTACCCGTCCCTGTACCGCCTGAAGCGCCACATCAAGAGGGCGCACATCCCCAACGTGTGCGACGAGTGCGACGCCGTCTTCTACGACCGCGCCATGTACACAAAGCACCGGAAGCAGCACAGCGAGGGCAGGCCGGCGGCGTGCGCCCACTGCGGGAAGACCTTCGACAAGCAGAAGAACCTGAGCGAGCACGTGCGGCTGCAGCACAAGGAGGACGGCCACGTGCACAAGTGCGAGCTGTGCGAGAAGACCTTCATCAACGCGCCGCTGCTGAAGAACCACGTCAAGACGCACGACAAGTGCTTCAAGTGCAAGTACTGCGGCAAGCTGTTCAGCTCGCGGTACAACCTGGAGACGCACTCGGTGACGCACACCGGCGAGAAGAACCACAAGTGCGACGTCTGCAACAAGGAGTACTCGACCAAGAGCAGCCTGAAGAACCACAAGGCCACGCACAGCGACGCGAAGAACTTCAAGTGCGACCAGTGCCCCAAGCTGTTCAAGACGAACCGGAGACTGTACGTGCACAAGTTCTCGCACGCGACCGAGGAGAAGTTCCAGTGCGAGATCTGCAGCGCCCGCTTCAGGGTCAAGCAGTACCTGAAGTACCACATGATCAAGCACTCGTCCATGAAGCCCTTCGAGTGCAAGGTGTGCAAGAAGAAGTTCAAGCACAAGAAGTCGTGGGAGAAGCACTCCGCGCACGACAAGCACCTGACCAACGTCAAGAAGGAGCCGCACCGCTGCGACCTCTGCGCGGAAGAGTGCGCCTCCAAAACCGATCTCTTGGAGCACTTCAGGCTCTTTCACGAGGACGCTGCCCCCAACGAGGCTGCACAACCACACATCAAAAAGGAAAACCATCCTCAGTTAGATTAG
Protein Sequence: MEECTSSPDSLNSSSDDPKSKNSSSHRDAVCVKQEQDYFSSPGGEDFDLKLIKSEDFVKNEDCGAARPGSHKLSEGGVTDNETTVYKCNICSEDFRVFVEYRAHRKQHFVEKRTCKVCRTVCQSISKLEIHMNTHLGLKPYKCTQCGKNFVSNNQLKLHGRSHSDEKRYSCKKCTKAFRHLGSLRSHMVTHNNIKEFQCKNCGDSCPNLQSYRKHLESHGQRIEIKCELCNKVFPTDRHLQTHLNAHTELQYPCEYCERIYPSLYRLKRHIKRAHIPNVCDECDAVFYDRAMYTKHRKQHSEGRPAACAHCGKTFDKQKNLSEHVRLQHKEDGHVHKCELCEKTFINAPLLKNHVKTHDKCFKCKYCGKLFSSRYNLETHSVTHTGEKNHKCDVCNKEYSTKSSLKNHKATHSDAKNFKCDQCPKLFKTNRRLYVHKFSHATEEKFQCEICSARFRVKQYLKYHMIKHSSMKPFECKVCKKKFKHKKSWEKHSAHDKHLTNVKKEPHRCDLCAEECASKTDLLEHFRLFHEDAAPNEAAQPHIKKENHPQLD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -