Aver001069.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Asbolus verrucosus
Gene Symbol
-
Assembly
GCA_004193795.1
Location
QDEB01009783.1:4865-21173[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 50 0.0033 0.17 12.2 4.2 1 23 263 285 263 285 0.98
2 50 0.036 1.8 8.9 2.7 1 23 291 313 291 313 0.98
3 50 0.00017 0.0086 16.2 0.0 1 23 319 341 319 341 0.96
4 50 0.21 11 6.5 3.1 1 23 346 368 346 368 0.93
5 50 0.00071 0.036 14.3 1.3 2 23 379 401 378 401 0.97
6 50 0.0005 0.025 14.7 0.2 3 23 408 428 406 428 0.95
7 50 5.4e-05 0.0027 17.8 6.2 1 23 434 456 434 456 0.98
8 50 0.00074 0.038 14.2 0.8 1 23 462 485 462 485 0.94
9 50 0.0059 0.3 11.4 1.8 3 23 496 517 494 517 0.92
10 50 0.0074 0.38 11.1 1.3 1 23 523 545 523 545 0.98
11 50 0.49 25 5.3 1.1 6 23 554 572 554 572 0.95
12 50 3.7e-06 0.00019 21.5 1.4 1 23 576 598 576 598 0.97
13 50 4.3e-05 0.0022 18.1 0.8 1 23 607 630 607 630 0.95
14 50 4e-05 0.002 18.2 0.2 1 23 637 659 637 659 0.97
15 50 2.3e-07 1.2e-05 25.3 0.6 3 23 667 687 665 687 0.97
16 50 0.0024 0.12 12.6 0.8 1 23 693 716 693 716 0.94
17 50 0.00023 0.011 15.8 0.3 3 23 724 744 722 744 0.97
18 50 1.3e-06 6.6e-05 22.9 0.2 2 23 763 784 762 784 0.96
19 50 0.24 12 6.3 4.1 1 23 790 812 790 812 0.95
20 50 0.094 4.8 7.6 0.1 2 12 821 831 820 844 0.73
21 50 2e-05 0.001 19.2 0.1 1 23 850 872 850 872 0.97
22 50 0.024 1.2 9.4 2.1 3 23 883 905 881 905 0.94
23 50 0.0058 0.29 11.4 0.4 3 23 912 932 910 932 0.96
24 50 0.00012 0.0061 16.7 3.4 1 23 938 960 938 960 0.98
25 50 0.00022 0.011 15.9 3.1 1 23 966 989 966 989 0.98
26 50 0.12 6.1 7.3 0.1 1 16 995 1010 995 1012 0.91
27 50 0.028 1.4 9.3 3.7 2 23 1032 1053 1032 1054 0.95
28 50 9.1e-07 4.6e-05 23.4 0.1 1 23 1059 1081 1059 1081 0.98
29 50 0.035 1.8 8.9 5.0 1 23 1089 1111 1089 1111 0.97
30 50 0.0031 0.16 12.2 3.2 1 23 1118 1140 1118 1140 0.91
31 50 0.00033 0.017 15.3 0.4 3 23 1147 1167 1145 1167 0.96
32 50 0.23 12 6.4 2.1 2 23 1177 1200 1176 1200 0.94
33 50 0.00033 0.017 15.3 1.0 3 23 1207 1227 1205 1227 0.96
34 50 2.5e-06 0.00013 22.0 0.7 3 23 1235 1255 1233 1255 0.98
35 50 0.0057 0.29 11.4 4.4 1 23 1261 1284 1261 1284 0.98
36 50 0.00058 0.029 14.6 0.1 1 20 1290 1309 1290 1311 0.94
37 50 0.00011 0.0056 16.8 0.1 3 23 1334 1354 1332 1354 0.96
38 50 0.0061 0.31 11.3 1.3 1 23 1360 1382 1360 1382 0.97
39 50 0.032 1.6 9.1 1.2 1 23 1389 1413 1389 1413 0.85
40 50 0.084 4.3 7.7 0.1 2 17 1420 1435 1419 1436 0.88
41 50 0.15 7.8 6.9 4.9 3 23 1452 1473 1450 1473 0.93
42 50 0.00014 0.0071 16.5 0.9 1 23 1478 1500 1478 1500 0.96
43 50 9.9e-05 0.005 17.0 0.8 1 23 1506 1528 1506 1528 0.99
44 50 4.1e-05 0.0021 18.2 2.9 2 23 1534 1555 1533 1556 0.93
45 50 0.011 0.57 10.5 5.8 1 23 1559 1581 1559 1581 0.98
46 50 0.15 7.8 6.9 1.2 1 23 1588 1611 1588 1611 0.90
47 50 0.00053 0.027 14.7 0.4 3 23 1618 1638 1616 1638 0.95
48 50 3.8e-06 0.00019 21.4 1.3 1 23 1644 1666 1644 1666 0.98
49 50 0.0041 0.21 11.9 0.9 3 23 1674 1695 1672 1695 0.93
50 50 7.7e-06 0.00039 20.5 0.4 1 23 1701 1723 1701 1723 0.98

Sequence Information

Coding Sequence
atggGTAGCATCGACGATATTATGCAGTTGTGTCGTTTGTGCTTAGTCAAGGACCAAGTTAACATACCAATCTTCGACGAAACTAGTGATATTAGAcagacttttttgaaaatcaattcgTGTCTGCCGGTTAAGGTGTCGCGCGATGACAACTTGCCGAAAAAGATCTGTGATGGATGTTCCTATAAGTTAGACATGCTGTATATCTTCCGGAACACGAGCGTAGATTCGGAGAAGCAACTGATAACGTGGTTGAATCAGGCTGGTCTGAGTTCTTTGTCTCAAGCGGCTGTCAAAGACGGCGCAACGAAACCAGAGATAATGGTAAAGCAGGAGACTTTCGAAACTACCGACGCTCGAATAGACGATAACCCCGAAATGGGCGTGGATGCCCATCCTGACATGAACATGGAGGCTCAACACCCGGAAATGGGCGTCGATGCGCACAGTTACATCATGCAGCAGCAGAAGTTGCCGTATCAGCAAGAGTTCGCTTTCGGGGAGCCGTCAGGTTCGGCGGTGGGTTTGATCGCTGAAGAACCCGCGCCCAAAAGAGCGAAACGTGCCGCCGCTCTCAAAAAACACGTTCCTTTAGAGACTGACGAAGACGAGTTGGACGCCGCCATGCAGATCACGAAGGCGGAAGAGGAAGATAGCGATGATGTTGATCAACCTGATTACGTTGAAGCACCTTCAACTAGTGCTGACGACCAGCCCGGACCTTCTGGAGTGGGCAAAGGCACGATAGAAGCACCGCATCGCCTGAAGGTCCACACACCACAAAGATACCAATGTTCAGTCTGCGGCAAAAAGTTCAAAGAACGTTGCCGTCTTAAACTCCACAGCGAAACGCATTCCAAAGAAAAGCTGTATTATTGCGGTTTTTGCGACGAGCATCTCAGAACCTACCAGCAGCTCCTAGCGCATAAAAGAAACCACCAAAACTTCAAGGAATTCGTCTGTCCGGAATGCGGTCGCAAGCTGCGCAGCGCAGCTACGTTGAAAGAACACATCGCTGCCCACAAAGGGGTGCAGTATCCGTGCCCTATCTGCCAACAGCCTTTCAGAAGCAAATTTATCCTGAAATGTCACAAAAAAACCCACGATGCCAACTACGAACAAACCAGAATTGTTAAATGCAACGCCTGTCAGAAAGAGTTCATGAGCGAGAACAGCTTGAAGAAACACATCAGGAAGTCGCACAAAGGCGAGCGACATCTGTGCGAGGTTTGCGGGAAGTCGTTGACGTCAGCTGCGAGTCTGAGGGATCACGTGTTGATTCACACTGGAGAAAAACCTTTCAGTTGCCACTATTGCGAGAAGAAGTTCGCCAAGAAGCAGCACCTCACGGACCATTTGAGGGTGCACACTAAAGAGAAACCGCACGCTTGCGAGTTTTGCGATAAGAGGTACTCACAGAGGACTCCTTTAACGTTGCACATTAGAGCCATACACAACGGAGAGAAGCCGCACGCTTGCTTAATCTGTCCGAAACTGTGCAACAAAGGCTTTAAGACCCATCGGCAGTTAAAATCACACAGCGATGTTCATAGACCGGAAAAATCTTACTACTGCGACGTGTgcgaaaaatatttgcaaactCAGGGTGAACTGTCCAAACATAAGAGATACCACAGCAACTACACGGGACTCATGTGTTGCGGTCGCAGATATCGCAGCGAGGAGACTTACAGAGCACATCAGAATTTTTGCCATCAGACGACGTATATTTGTGACGTATGCCAAAAGACGTTTAAGCGAATGTCGAATCTCAAAACTCacgaaaaaattcataaagaaGGTTATAAGCCTCCAAGTTTCAACTGTGATAAGTGCGATAAAACATTTAGCGGAAAGAAAGATTTGAAACTCCACGTTGAGAGTATTCATGAAGGGAAACCTCCACAGTTCATCTGTGAAATTTGCGGAAAAATCGTGAAATCCAGGACGAGTTTGAAGgatcatttgaaaattcactCTGGGGACAAATCGGTTATTTGTACATATTGTGGGAAGAGTTTTACGTCGCAAAGGTATTTGAAAGTGCACTTGAGAGTACATACGAAAGAAAAACCGCACGCCTGCAAGTTTTGCGATAAGAAGTACTCACAAGCGACTCCTTTGACCTTGCATGTTAGAGCTGTGCATACTGGAGAAAAACCATACGGTTGCTCTATTTGTGAGAAGCGTTTTATCAGCAGAACTTTGCTCAATGCTCATTTAAAAGCCCATTCTTTGCGGAGCCATCGCTATAAGGTGCACTACTCCCAAAAGAGCAAAACGCTCCCATGTTCGGAGTGCGGTAAGTTCTTCCGGACGGAATCGGCGCTGAAAACGCACATGGAGGTGCACGAGAAAACCCTGAAGTATTACTGCGATTTCTGCGATAAGCACCTCACCACTTACTATCAGATGGCGAATCACAAGTATCTCCATTCGCAGAAACCCGGAGGGAAGATCGTGTGTCCCGATTGCGGGAAAACTTACTCTGCGGCCTCCAAGACTGCGTACAACAACCACAGATTGTTGCACAATTCGGAAGTGAATTTCGTTTGCGACAAGTGTGGGAAAGCGTTCGCGTACGAAGCGAACTTGAGGGAGCATAAGATCATCCACGACGAGAATTACAAACCTCCGACCGTCATTTGCAAGATTTGTTCGGACAAGAAGTTCAAATCTTTGAGCGGATTGAGGCATCATTTGTTGAGGTTTCATAGAGGGCGGCGACATCTTTGTGAGATTTGCGGGAAAGCTCTGATGTCGGGGACGAGTTTGAGGGACCATATGATGTCGCATACCGGCGATAAGCCGTATGTTTGTAGCGTGTGCAAGAAGGCTTTTAccaaaaaagattatttaacTTGTCACATGAGGGTGCATACGAAGGAGAAACCATTTACTTGCAAATTTTGCCAAAAGGGTTTCGCGCAAAGTTGTTCTTTGAGGGTTCATGTTAAAACTGTGCACGAAGGGAAGAAGCCCTATGTTTGTGACATTTGCTCGAAACAGTTCGGTACCAAGGGTTTATTGTTGGAAGAATCTTTGGAAATTGAAGAAACCAAGTTAAAATACCCCTTCTTTGATCCAAAAAACACGTGCAAGAAGTGTAATGTcatattcgaaaattttaacgcGTTGCGGAGACATCGCTACAGGCACCATTCGATATACGATTTTGAGTGTTCAGTATGTGGTAAACTATTTCGAGATCCATCGTCGCTAAAGATCCACATGGAAATCCACGATACTAGCGGTAACAAGAAGTATTATTGTGACGTTTGCGAAAAACCCCTAAAGACGTATTACCAACTCAACAGCCATCGACACCACCATTCAAAAATCGAAGAAACGTTCATATGTCCCAATTGCGGCAAAATCTACAAGACGAAGCAAGCCTTCAAGAACCATTGTCTTCGTCACGCCGGTACCAACCTAGCTTGCGACAAATGCGGCAAATATTACGCGAGCGAAAAGACTTTGAAAGCGCACAAGATGACCCACGACGACAATTACATATCGCCAGAGATCACGTGTAGCTTGTGTTCGGAGAAGAAGTTTGCGTGTCCCAGCTCGTTGCGGCGCCACCTTCGCAAAATCCACCAAGGTAAACTGCATCTTTGCGAGGTTTGCGGGAAGGCGGTTATGACGTCGACGAGTTTGAGGGACCATATGAAGAAGCACACCGGCGAGAGACCGTTTGGTTGTGGCGAATGCGGGAAGAAGTTCTCCACGAATTCGTATTTGACAGTTCACAAGAGGGTGCATACGAAAGAAAAACCGTACAAATGCAAGTGTTGCGGTAGAGCGTTTTCGCAAGTTTGCTCTTTGACTCTTCATGTCAGGACGGTGCACGAGGGGAAGAAGCCGCACGTTTGTGAGATCTGCTCGAAGGGTTTTGCCACTAAAACGCTGCTCAATTCGCATCTTTCCTTCGATACTTATCCACAGTTGCTGAGTCATCGCTATAAGATTCACAAATCCAAAATCAAAACGCTCGCGTGTCCAGTTTGTGGTAAATTATTCCAGTTCCGATCATCTCTCAAGGACCACATGGAAGTACACGatgaaacaatgaaatattattgcGATTTCTGCGAGAAACCCCTGAAAACCTATTACCAACTTGCCAACCATAAAAATCTCCATTCGAAAACCGGAACTAGATTCGTGTGTCCCGATTGTGGGAAAGTCTATGGCTGTAAGTCGAAGACGGCGTTCAAGAATCATCTTTTACTCCACTCGGCTCCTAATAGTTTGGTCTGTGATAAGTGTGGTAAATCATACGCGACTGAAAGATATCTCGAATTGACGAAAGTTGAAGAAGTTGGTGCTTCGTTGTCAGAGGGCCATTTGTGTCGAAGGTGCAGCATCAAATTTCCCACCAAGCAACTCTTGCGGAAGCACCACAGGGACGTTCACTGGGAAAAAATCTATTCTTGTTTAGTGTGcgggaaaaaattcaaaactcgAGGTGCCTTCAGAACGCACAGCGAAATACACTCGGAAGACACTCCTTACTATTGCGAAGAGTGTGACAAATACTTGCGCACCAAAAACGCACTGGCGAGCCATCTCAGACGCCACAGTTCCGTCAGACTGCCTTGTTCTGAATGCAAGAAGACTTTCCGCAACGAGTCATCTTTTAACAGACATTATAACGCGCACCATAAAGTGCACAAATGTGAAACATGCGAGCGCATTTACAAATCTTCACATAAGTTGATAGAGCATAAGAAGACACACGATGCGAATTACAAATCATTCACTTGTCAGATTTGCGAGAGGCTATTCGTCGACGAGAAGGGTTTGCAGTATCATTGCAAAGTGATTCATGAGGGTCAGAGACACCTGTGTGAAGTTTGCGGCAAAGCGTTGCGGTCGGCCTCGAGTTTGAGTGACCACACGAAGATACATACGGGAGAAAAGCCGTTTTCTTGCGATTATTGCGATAAGAAGTTTACCAAAAAGACGTCGTTGGTGGTTCACGTGAGGGTGCATACTAAAGAGAAGCCGCATTTGTGCAAGTTTTGCGAGAAGAGTTATTCGCAGATTGGGTCTTTGACTATGCACGTCAGGGCGGTTCACAGCGGAGTTAAACCCTATCCTTGTCTGATTTGTtccaaaagttttattaataagacGTTGCTCAATGCGCATCTCAAATCACACTCAGTTAaagttgtataa
Protein Sequence
MGSIDDIMQLCRLCLVKDQVNIPIFDETSDIRQTFLKINSCLPVKVSRDDNLPKKICDGCSYKLDMLYIFRNTSVDSEKQLITWLNQAGLSSLSQAAVKDGATKPEIMVKQETFETTDARIDDNPEMGVDAHPDMNMEAQHPEMGVDAHSYIMQQQKLPYQQEFAFGEPSGSAVGLIAEEPAPKRAKRAAALKKHVPLETDEDELDAAMQITKAEEEDSDDVDQPDYVEAPSTSADDQPGPSGVGKGTIEAPHRLKVHTPQRYQCSVCGKKFKERCRLKLHSETHSKEKLYYCGFCDEHLRTYQQLLAHKRNHQNFKEFVCPECGRKLRSAATLKEHIAAHKGVQYPCPICQQPFRSKFILKCHKKTHDANYEQTRIVKCNACQKEFMSENSLKKHIRKSHKGERHLCEVCGKSLTSAASLRDHVLIHTGEKPFSCHYCEKKFAKKQHLTDHLRVHTKEKPHACEFCDKRYSQRTPLTLHIRAIHNGEKPHACLICPKLCNKGFKTHRQLKSHSDVHRPEKSYYCDVCEKYLQTQGELSKHKRYHSNYTGLMCCGRRYRSEETYRAHQNFCHQTTYICDVCQKTFKRMSNLKTHEKIHKEGYKPPSFNCDKCDKTFSGKKDLKLHVESIHEGKPPQFICEICGKIVKSRTSLKDHLKIHSGDKSVICTYCGKSFTSQRYLKVHLRVHTKEKPHACKFCDKKYSQATPLTLHVRAVHTGEKPYGCSICEKRFISRTLLNAHLKAHSLRSHRYKVHYSQKSKTLPCSECGKFFRTESALKTHMEVHEKTLKYYCDFCDKHLTTYYQMANHKYLHSQKPGGKIVCPDCGKTYSAASKTAYNNHRLLHNSEVNFVCDKCGKAFAYEANLREHKIIHDENYKPPTVICKICSDKKFKSLSGLRHHLLRFHRGRRHLCEICGKALMSGTSLRDHMMSHTGDKPYVCSVCKKAFTKKDYLTCHMRVHTKEKPFTCKFCQKGFAQSCSLRVHVKTVHEGKKPYVCDICSKQFGTKGLLLEESLEIEETKLKYPFFDPKNTCKKCNVIFENFNALRRHRYRHHSIYDFECSVCGKLFRDPSSLKIHMEIHDTSGNKKYYCDVCEKPLKTYYQLNSHRHHHSKIEETFICPNCGKIYKTKQAFKNHCLRHAGTNLACDKCGKYYASEKTLKAHKMTHDDNYISPEITCSLCSEKKFACPSSLRRHLRKIHQGKLHLCEVCGKAVMTSTSLRDHMKKHTGERPFGCGECGKKFSTNSYLTVHKRVHTKEKPYKCKCCGRAFSQVCSLTLHVRTVHEGKKPHVCEICSKGFATKTLLNSHLSFDTYPQLLSHRYKIHKSKIKTLACPVCGKLFQFRSSLKDHMEVHDETMKYYCDFCEKPLKTYYQLANHKNLHSKTGTRFVCPDCGKVYGCKSKTAFKNHLLLHSAPNSLVCDKCGKSYATERYLELTKVEEVGASLSEGHLCRRCSIKFPTKQLLRKHHRDVHWEKIYSCLVCGKKFKTRGAFRTHSEIHSEDTPYYCEECDKYLRTKNALASHLRRHSSVRLPCSECKKTFRNESSFNRHYNAHHKVHKCETCERIYKSSHKLIEHKKTHDANYKSFTCQICERLFVDEKGLQYHCKVIHEGQRHLCEVCGKALRSASSLSDHTKIHTGEKPFSCDYCDKKFTKKTSLVVHVRVHTKEKPHLCKFCEKSYSQIGSLTMHVRAVHSGVKPYPCLICSKSFINKTLLNAHLKSHSVKVV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-