Aver010365.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Asbolus verrucosus
Gene Symbol
-
Assembly
GCA_004193795.1
Location
QDEB01095811.1:20060-37680[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 54 0.00073 0.037 14.2 0.1 1 23 8 30 8 30 0.97
2 54 4.9e-06 0.00025 21.1 0.1 1 23 36 58 36 58 0.98
3 54 0.00014 0.0073 16.5 1.4 1 23 64 86 64 86 0.98
4 54 0.0064 0.32 11.3 2.6 1 21 92 112 92 113 0.94
5 54 3.3e-06 0.00017 21.6 0.5 2 23 135 156 134 156 0.97
6 54 5.1e-05 0.0026 17.9 0.1 1 23 162 184 162 184 0.99
7 54 0.0021 0.1 12.8 0.7 1 19 190 208 190 211 0.96
8 54 2.6e-05 0.0013 18.8 1.4 1 23 218 241 218 241 0.96
9 54 2.5 1.3e+02 3.1 1.8 2 21 245 264 244 265 0.91
10 54 0.034 1.7 9.0 0.2 3 23 268 289 267 289 0.95
11 54 2.9e-05 0.0015 18.6 0.3 1 23 295 317 295 317 0.98
12 54 9.5e-05 0.0048 17.0 0.1 1 23 323 345 323 345 0.98
13 54 5.7 2.9e+02 2.0 7.5 1 23 351 379 351 379 0.63
14 54 0.00025 0.013 15.7 0.2 1 23 386 408 386 408 0.98
15 54 3.1e-06 0.00016 21.7 0.6 1 23 414 436 414 436 0.98
16 54 1.4e-06 7.2e-05 22.8 2.8 1 23 442 464 442 464 0.99
17 54 0.22 11 6.5 0.6 1 15 470 484 470 489 0.84
18 54 0.00018 0.0091 16.1 0.4 1 23 491 513 491 513 0.98
19 54 6.6e-06 0.00034 20.7 0.6 1 23 519 541 519 541 0.98
20 54 1.8e-05 0.00094 19.3 5.0 1 23 547 569 547 569 0.98
21 54 0.00062 0.032 14.4 0.9 1 23 585 607 585 607 0.98
22 54 1.8e-06 9e-05 22.5 0.3 1 23 613 635 613 635 0.98
23 54 4.5e-07 2.3e-05 24.3 2.8 1 23 641 663 641 663 0.99
24 54 0.47 24 5.4 1.3 1 23 677 699 677 699 0.95
25 54 1.2e-05 0.00063 19.8 0.2 2 23 706 727 705 727 0.96
26 54 0.00022 0.011 15.9 1.5 1 21 733 753 733 755 0.95
27 54 7.3e-07 3.7e-05 23.7 0.2 1 23 761 783 761 783 0.97
28 54 0.0032 0.16 12.2 0.1 1 23 788 810 788 810 0.93
29 54 1.6e-07 7.9e-06 25.8 0.5 1 23 816 838 816 838 0.98
30 54 0.00031 0.016 15.4 0.5 1 21 844 864 844 865 0.95
31 54 0.0025 0.13 12.5 0.1 1 23 870 892 870 892 0.98
32 54 9.7e-05 0.0049 17.0 0.1 1 23 898 920 898 920 0.98
33 54 5.2e-06 0.00026 21.0 2.1 1 23 926 948 926 948 0.98
34 54 0.00021 0.011 15.9 0.4 1 20 954 973 954 975 0.95
35 54 5.8 2.9e+02 2.0 0.2 13 23 974 984 973 984 0.90
36 54 9.4e-05 0.0048 17.0 0.1 1 23 987 1009 987 1009 0.98
37 54 9.8e-06 0.0005 20.1 0.1 1 23 1015 1037 1015 1037 0.98
38 54 0.00013 0.0068 16.5 1.0 1 23 1043 1066 1043 1066 0.95
39 54 6.7e-06 0.00034 20.6 2.2 1 23 1076 1098 1076 1098 0.98
40 54 2.1e-05 0.0011 19.1 3.8 1 23 1104 1126 1104 1126 0.98
41 54 0.00021 0.011 15.9 0.6 1 23 1136 1158 1136 1158 0.98
42 54 2.7e-06 0.00014 21.9 0.4 1 23 1164 1186 1164 1186 0.97
43 54 9.7e-08 4.9e-06 26.4 1.6 1 23 1192 1214 1192 1214 0.99
44 54 4.1 2.1e+02 2.4 7.0 1 23 1220 1247 1220 1247 0.62
45 54 6.1e-07 3.1e-05 23.9 0.5 1 23 1254 1276 1254 1276 0.99
46 54 1.5e-05 0.00075 19.6 0.1 1 23 1282 1304 1282 1304 0.98
47 54 1.5e-07 7.9e-06 25.8 1.1 1 23 1310 1332 1310 1332 0.98
48 54 7.3e-06 0.00037 20.5 2.7 1 23 1364 1386 1364 1386 0.98
49 54 0.0006 0.031 14.5 0.8 2 23 1418 1440 1417 1440 0.93
50 54 2.8e-05 0.0014 18.7 1.7 1 23 1445 1468 1445 1468 0.97
51 54 0.00036 0.018 15.2 1.7 1 23 1475 1497 1475 1497 0.98
52 54 3.7e-08 1.9e-06 27.7 0.3 1 23 1504 1526 1504 1526 0.98
53 54 1.7e-05 0.00084 19.4 0.2 1 23 1532 1554 1532 1554 0.98
54 54 5e-07 2.5e-05 24.2 1.7 1 23 1560 1582 1560 1582 0.98

Sequence Information

Coding Sequence
ATGCATAGCGGCAAAGCGGAGTTCATTTGTGACGTGTGCGGTAAAGGTTTCAGTCTGGGAAAGCTGTTGACagcacacaaaaaaattcatgtgaAATACAAAGAGTTTGTGTGCGAAATCTGCAGCAAAGCGTTCGCGTTTGCGCCGTCATTGCGCAACCATATGAGGGTCCACACCGGAGAGAAACCATTCAAGTGCGACATCTGCAGTAAGGGCTTCCAGCAGAGCTACGCTATGAAAGTTCACAGAAGAAACCACACGGGGGAGAGACCTTACAGATGCGACGTTTGTCTCAGAGGGTTTATCGGGAGCTCACATTTGCGCCGTCATAAGTGCAAGGGTAAagtgaaattagaaatagaTTTACACATGAAGTTCCACCGAGGCGAAAAGGACCGTTTAGTTTGTGAAGTTTGCGGCAGAACTTTCGTTTTATTGGACCACCTGAAGACTCACATGAGGGTCCACACAGGAGAGAGGCCTTACGTGTGCAAAATATGCGACAAGGGGTTTATAGCGAGCGGTGGGTTGGGGCAGCACATGCGTCGGCACACCGGAGATAAACCTTTTAAGTGTGATGTGTGCCAGAAATCGTTTTATAACAAAACTGTGTTGACCGACCATAAATGGTTGCATACAGGCAAGATGCCTTTCACATGTGATATTTGTGATAAAGGTTTTCCGAGAAGGTCGTTCTTAAAGTATCACCTTAATAACTATCACACTAGTATTAAATGTTCAACTTGTCAGCAGGAGTTTTCCTGTAGAAAGTCTTTAGCTGTTCACAAACAGTCGAATCTGTGCGATATTTGCGGGAAAAATTTCGCGACGATGCAGGGGATGTTGTATCATAAGAAAGTGGTGCACAGTGTCGAGAAACCGTACATTTGTGAAGCTTGTGGGAAGAGGTTTAAGGTTAGGAAGCTGTTAACAGCGCATGCGCGCACGCATTTGGAAACTAAACCGTTTGTTTGTGACGTTTGCAATAAGGGTTTCGCCCAACCTGCTCTCTTGGTTTATCACACGAGGTATCATACTGGAGATAAACcttttaaatgtgaatattgcGATAAGAGATTTGTGTGCTTTAAGATCATGCGCAACTCGGGTGCTTTCAAGAGACACATGCTTCTGCATAGTGACGAACGTGAAAGTTACGTTTGTGATGTTTGCGGCAAAAGCATAACGACGTTGCAGGGGTTGAAGGAGCATAAAAAGGTGCATTTGGAGGAGAAGAATTTTGTTTGTGAGACTTGCGGTAAAGGCTTCACGTACAGAAAACTGTTGACGGAACATCTTCGTGTGCACACCAAAGAAAAACCTTTCAAGTGCGAGCTCTGCGAGAAGAGTTTCACGCAGCGGTCAAGTCTGACCATTCATAAGCGGCGCCACACGGGAGAGAGGCcgtacaaatgtcaaatttgcaGAAAGGAGTTCATTTCGAGGATCCACACTGGCGTGCACAAGACTTATGTTTGTGATATTTGCGGGAAGAACATATCGACTCTGCAAAGTTTGAAGGATCATAAAAAGATGCATTTGGGGGTGAAGAATTACATTTGTGATTTCTGTGGGAAGGCTTTTAGGAATCATCAACTGTTGGTCATACATATACGGGTTCATACCAAAGAAAAACCTTTCAAGTGCGATATTTGCGAGAAATGTTTCACGCAACAGACAACTTTAACTATTCACAAGCGTTACCACACGGGGGAGAGGCCCTACAAGATGCACAATGGGGAGGTTGAAACTTACATGTGCGACATATGTGGCATGAGTGTGACATCGTTACAGAGTTTGAAGTATCATAAGAAACGGCATACTGGAGAGAAACCTTTCATTTGCGAAGTTTGTGGGAAGAGTTTcatcacaaaaaatatgttaatcaCACACACACGAGTTCACACTAAAGAAAAACCGTACAAGTGTACCGTCTGTAGCAAGACTTATACGCAGAAATCATCGCTCAATATCCATATGCGGTATCACACTGGCGAAAAACCGTACAAGAACGAGAgcgacaatttttatttatgcgaCGTTTGTGGCAAGCATATCATGTCAATGCAGAGTTTAGGGTATCATAAGAGGACTCACACAGGGGAGAAGATGTGTGTTTGTGAAATTTGTGGCAAAGGTTTTATTACTAAGGCACTCTTAATTGCGCACTTTCGAGTTCATACGGGGGAGAAACCGTTCAAGTGCACCATTTGTGACAAGGGTGTTTCAACCAAATCGGCGCTTACTCTCCACGTGCGTTGTCACACAGGGGAGAAGCCGTTTCAGTGCGAAATCTGCCCGAAGAAATTTGTGTCGAAGGCTTTACTCAAGAGGCACATGGCGGGGCACAATAGCGAGCGCTACATCTGCGATGAGTGCGGAGCCAGTTTGGCAACGTGgcagaattttaaacagcATAAAGTATTACATACCGGCGTGAGGAATTACGTGTGCGAGGTTTGCGGCAAGACTTTCACGCGCAAGGCGAAGTTATCCGAGCACCAGCGCATCCATTCCGAAGACAAGCCGTTCGTGTGCGCGCTTTGCGAGAAGAGTTTCAAGCAGAAGGCGGCGCTTAAACTTCACCACAAAGGTGAGTTCGAATATTTCGTATGTGATGTCTGTGGGATAGCTCTGTCGACCAGGCAGTCTTTGGACAACCATAAGAAAATACACACAGGAGAAAAGGATTTTGTTTGTGAGATATGCgggaaaaaattcaacaagaaAGCGATCCTAGTCGATCATATTAGAGTCCACACGAAAGAAAAACCCTACCAGTGTAGTTTTTGTGAGAAGAGTTTTGCCCAGAAGTCCACCCTTAACATGCACGTGCGATACCACACCGGTTACAAGCCCTTCGAATGTGAAATTTGCTCGAAAAAGTTCGTGAGGAAGACACTGTTAACGAGCCATAAATCTGACAATTTCAAGAAACACATGCAAGGACACCAAGGATTTGTTTGCGACGTGTGTGGGAAAGTTGTGAAGTCGAACGAGAGTCTGGGTTGGCACAAGAAAACGCACACCGGAGAGGTGGATTTCGTTTGCGACATTTGTGGGAcaggatttattaaaaaaggcaTGTTGGAGAATCATTTGCGTGTTCATACGAAGGAAAAGCCGTTTAGGTGTAGCATTTGTGAGAACAGTTTTACCCAACAATCGACTCTCAATATTCACAGCTTGAAGGATCATAAGAAGAGGCATACTGGGGAGAAGAGTTTCGTTTGTGAGGTTTGCGGGAAATGCTTTACCACGAGGATGCTTTTGGTTACTCATAGCAGGACCCACACGAAGGAGAAACCGTTCAAGTGTGCAGTCTGCTATAAATGTTTCACGCAGAAACCGACACTTAACATTCATATGCGTTACCACACTGTGCACAGTGGCGAGTTTAACAGTTATGTGTGCGATATGTGTGGTAAAGGTTTGACGACTTTGCAGAGTCTGAAAGACCACAAGAAGAGGCACACTGGAGAGAAGAGTTTCTTTTGTGAAATTTGTGGAAAGGCTTTCACCACGAGGAATCTCCTGGTGATTCATAGGCGGGTTCACACCAACGAAAAGCCGTACAAATGTAATGTTTGCGACAAGAGCTTCACACAGAAACCCACTCTGAACATCCACATGCGATACCACACTGGGGAAAGGCCCTACAAGTGCCAAATCTGCCCCAAAGAGTTCTGCTTCAAAGTCATCCAGACGAAGAAAGCTTTCAAGGAGCACATGCAAAAGCATAGTGGCGATTATAACAATTACGTTTGTGACGTTTGCGGAAAAAGCGTCACAAAATCGACCTCTCTGAGAGACCACATGAGGACGCACACTGGCGAAAAGCCGTTCGTTTGTGATGTTTGTGGTAAAGCTTTCGTCAAGAAGCAGTTGCTGGTGGAGCATACGCGAGTTCACACGAAAGAAAAACCCTTCAAGTGCTCGCTTTGTGGTAAAGGGTTCACGCAGAAGGGCTCGCTTAACATACACATGCGCTATCACACCGGGGAGAAGCCCTACAAGTGTCACATTTGTGCCAAAGGcaaaCAGCAGCATTTGGTTACACATAAGCGGGTGCATACGAAAGAAAAACCCTTCCAGTGTAGTATGtgcgaaaaaaaatttacacagAGGTCGACGCTTAGCATTCACTTGCGCTACCACACCGGCGAGAGGCCctataaatgtgaaatatgcACCAAAGGGATATTTATAATGCAGCAAGAAGGCGATGTGATAAGCCAGTGCCTTACCTGTGAATGTGAAGATTGCGGTTTAGGTTACGTAACGAAAACGGAGCTAATTCGACATCACAATGCCGTTCACAAAGGCTATCGCTACACGTGCCAGCACTGCGAGAAGAGCTTTCGGTACATGCCAAACTTGAAGATCCACCTCGCCACCGTTCATAACCCCAATCGCAAGAGATACAAGTGCGCATTTTGCTCCAAAATTTTCACGTTGGAGAGCAGTCTCAGGAAACACGTGAGCAAGCATAAAGGGGAAGCGGTTACTTTTATGTGCGAGATCTGCGGGAAGAGTGTGACCACCCCCAGCAGCTTGAAGATTCATATGAGGACTCACACTGGAGAAAAACCGTTTGTTTGTGACATTTGTGATAAACGTTTTATTAGTAGAATGCTATTAGTCACTCATGTGCGGATACATACACAAGAAAAACCATTCAGTTGTGAAGTGTGTAAGAAGAGTTTCACACAAAAAGGGACTCTTAACATCCATATGCGGTACCATACAGgATATTTATAA
Protein Sequence
MHSGKAEFICDVCGKGFSLGKLLTAHKKIHVKYKEFVCEICSKAFAFAPSLRNHMRVHTGEKPFKCDICSKGFQQSYAMKVHRRNHTGERPYRCDVCLRGFIGSSHLRRHKCKGKVKLEIDLHMKFHRGEKDRLVCEVCGRTFVLLDHLKTHMRVHTGERPYVCKICDKGFIASGGLGQHMRRHTGDKPFKCDVCQKSFYNKTVLTDHKWLHTGKMPFTCDICDKGFPRRSFLKYHLNNYHTSIKCSTCQQEFSCRKSLAVHKQSNLCDICGKNFATMQGMLYHKKVVHSVEKPYICEACGKRFKVRKLLTAHARTHLETKPFVCDVCNKGFAQPALLVYHTRYHTGDKPFKCEYCDKRFVCFKIMRNSGAFKRHMLLHSDERESYVCDVCGKSITTLQGLKEHKKVHLEEKNFVCETCGKGFTYRKLLTEHLRVHTKEKPFKCELCEKSFTQRSSLTIHKRRHTGERPYKCQICRKEFISRIHTGVHKTYVCDICGKNISTLQSLKDHKKMHLGVKNYICDFCGKAFRNHQLLVIHIRVHTKEKPFKCDICEKCFTQQTTLTIHKRYHTGERPYKMHNGEVETYMCDICGMSVTSLQSLKYHKKRHTGEKPFICEVCGKSFITKNMLITHTRVHTKEKPYKCTVCSKTYTQKSSLNIHMRYHTGEKPYKNESDNFYLCDVCGKHIMSMQSLGYHKRTHTGEKMCVCEICGKGFITKALLIAHFRVHTGEKPFKCTICDKGVSTKSALTLHVRCHTGEKPFQCEICPKKFVSKALLKRHMAGHNSERYICDECGASLATWQNFKQHKVLHTGVRNYVCEVCGKTFTRKAKLSEHQRIHSEDKPFVCALCEKSFKQKAALKLHHKGEFEYFVCDVCGIALSTRQSLDNHKKIHTGEKDFVCEICGKKFNKKAILVDHIRVHTKEKPYQCSFCEKSFAQKSTLNMHVRYHTGYKPFECEICSKKFVRKTLLTSHKSDNFKKHMQGHQGFVCDVCGKVVKSNESLGWHKKTHTGEVDFVCDICGTGFIKKGMLENHLRVHTKEKPFRCSICENSFTQQSTLNIHSLKDHKKRHTGEKSFVCEVCGKCFTTRMLLVTHSRTHTKEKPFKCAVCYKCFTQKPTLNIHMRYHTVHSGEFNSYVCDMCGKGLTTLQSLKDHKKRHTGEKSFFCEICGKAFTTRNLLVIHRRVHTNEKPYKCNVCDKSFTQKPTLNIHMRYHTGERPYKCQICPKEFCFKVIQTKKAFKEHMQKHSGDYNNYVCDVCGKSVTKSTSLRDHMRTHTGEKPFVCDVCGKAFVKKQLLVEHTRVHTKEKPFKCSLCGKGFTQKGSLNIHMRYHTGEKPYKCHICAKGKQQHLVTHKRVHTKEKPFQCSMCEKKFTQRSTLSIHLRYHTGERPYKCEICTKGIFIMQQEGDVISQCLTCECEDCGLGYVTKTELIRHHNAVHKGYRYTCQHCEKSFRYMPNLKIHLATVHNPNRKRYKCAFCSKIFTLESSLRKHVSKHKGEAVTFMCEICGKSVTTPSSLKIHMRTHTGEKPFVCDICDKRFISRMLLVTHVRIHTQEKPFSCEVCKKSFTQKGTLNIHMRYHTGYL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-