Aver010759.1
Basic Information
- Insect
- Asbolus verrucosus
- Gene Symbol
- -
- Assembly
- GCA_004193795.1
- Location
- QDEB01098841.1:12868-16762[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9e-12 4.6e-09 35.6 0.0 1 39 297 336 297 340 0.90 2 2 1.4e-06 0.0034 16.8 0.1 1 26 351 376 351 376 0.97
Sequence Information
- Coding Sequence
- ATGTCGATGCGTTTGCAGTCGCTCTTGCGTACGGCCGACCAGCTGAAGATCAAAGGCCTCTGCGAGCCCCCCGACGAGAAGGAGAACGCGCCGATCTCGCCGCAGTTCTTCCCCAAGGGCTTCTCCAAAGTCAGGAGGCCGACCTCGCCGAAGCAGTTCAAGTCGCAGGACAATAACAAGAGGCACAAACATAAAAAGCCCCATTTGGACAATACGTCGGATAAGGACGATAATGGCAGCCTAGACGGACGCTCTTCCGATGAAGAAAATGATATGCCAGTAGCTTTAAATGAACACAAGAGGAAAAGGGCGGAGCCTGAACAAATAAAACCTCTCAACATGAGCAGTCATGGAATTATGACGGGACAGACAATCTTCTCTCAGTTCGGAGTAGACACAGATGACTTCCCTCCAGAGCCCCCTGCGCCCTCCGCCATCCCCGTGGGCCACGTGGACATGCAGGACCATTCACCCACGCGCACCCTCCTCACCAACACCATCCATCGAACAGACCTGTCCGACTCCAGCGTCAAATACTGCGACATCAAGAAGGAGGCCGACATCAAGTTCGAAACGTTGCGCTCCTACGACCAGGACTCGCTCCTGGAGATGGACTCGCACGTGTCCGGCCCGGAGCACTCCATGGACAGCCACGAGGACGACCAGAGCATGCACCAAATGATGGTCACTCCAGAACTGATGGGCATGATGCCCGGCGTTTCGAATAGATTAGGTACTTCATCTCTCGCAGTTTCAGCCTTCCGCAAACTCATTCCGTCTTCCCCAGAATTAAGTAGCAACGAAGTACCTGCACTAAAAAACAACGGGCATTCGGAGAGCATACATCACACGCCGGCGAGGTCCCACGGCGGCGGCCCGAAAACCTGGACTCAGGAAGACATGGACATGGCCTTAGACGCTTTAAGAAACCACAACATGAGCCTAACGAAAgCCTCAGCGACTTACGGTATTCCCTCCACTACTCTATGGCAGCGGGCGCATAGGTTAGGTATAGACACACCAAAGAAAGAAGGCCCCACCAAGTCCTGGACCGAAGAGAATCTCAACAGCGCCCTCGAGGCGCTCAGGACCGGAACCATTTCCGCCAATAAGGCTAGTAAAGCTTAT
- Protein Sequence
- MSMRLQSLLRTADQLKIKGLCEPPDEKENAPISPQFFPKGFSKVRRPTSPKQFKSQDNNKRHKHKKPHLDNTSDKDDNGSLDGRSSDEENDMPVALNEHKRKRAEPEQIKPLNMSSHGIMTGQTIFSQFGVDTDDFPPEPPAPSAIPVGHVDMQDHSPTRTLLTNTIHRTDLSDSSVKYCDIKKEADIKFETLRSYDQDSLLEMDSHVSGPEHSMDSHEDDQSMHQMMVTPELMGMMPGVSNRLGTSSLAVSAFRKLIPSSPELSSNEVPALKNNGHSESIHHTPARSHGGGPKTWTQEDMDMALDALRNHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGPTKSWTEENLNSALEALRTGTISANKASKAY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -