Acap015462.1
Basic Information
- Insect
- Asbolis capucinus
- Gene Symbol
- stc_1
- Assembly
- GCA_018249125.1
- Location
- DWJZ01013228.1:1-7875[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 9 0.0006 8.8 7.1 12.9 1 19 33 51 33 51 0.99 2 9 2.7e-07 0.0039 17.9 11.9 1 19 92 114 92 114 0.89 3 9 0.33 4.9e+03 -1.6 2.3 5 10 143 148 143 148 0.95 4 9 4.4e-05 0.65 10.8 8.0 1 13 154 166 154 166 0.98 5 9 0.072 1.1e+03 0.5 0.8 2 10 167 175 167 177 0.95 6 9 1.7e-06 0.025 15.3 15.4 1 19 181 199 181 199 0.94 7 9 0.026 3.8e+02 1.9 16.7 1 18 238 254 238 255 0.81 8 9 1.2e-08 0.00018 22.1 13.5 1 17 291 309 291 315 0.84 9 9 8.7e-06 0.13 13.0 10.0 1 19 321 338 321 344 0.73
Sequence Information
- Coding Sequence
- TGCCACTGCGCTGTGTCGAAGACCCGCGTGGTGCCGTGCGAGCGCGGCGTGACGGCGAAGTGGACGTGCGGCGCGGAGTGCGGGCGTGTGCTCTCGTGCGGCGCGCACGTGTGTCGCCGCGAGTGTCACGCGCCGCCGTGCAGCGAGTGTCCGCTGCGGCCGGAGAACGTGCCGACTTGTCCGTGTGGAAAGACTAGGATACAGAAGGGTCAACGGAAATCGTGTACTGATCCCATACCGTTGTGCGACAATATTTGCGCGAAGCCACTGCGCTGTGGGCCCGATGAAGAGAGGCACTTCTGCAAGGAGAAGTGTCATGAAGGCGAGTGTCCAGTGTGCCCCGACTCGACTCATCTCCAATGTCGGTGTGGACACTCAACGCGCGAGGTACCATGCCGCGACCTGCCCGAAGCACGGAACAGTGTCACCTGCCAACGGAAGTGTAAtaagAAGCTGAGTTGCGGCCGGCACCGCTGCCGCGAGGTGTGCTGTGCTGGCGGCGAGCACCTCTGCACCGTTGTATGTGGCCGCAGTCTGTTCTGCCAGCAGCACCGCTGCGAGGAGTACTGCCACGCTGGACACTGCGCGCCGTGCCCGAGGCTCAATTTCGAGGAGGTTCGTTGCGAGTGCGGTGCGGCAGTGCTGCTCCCGCCCGTGCGGTGCGGCGCGCGGCCGCCTGTGTGCGACGCGCCGTGTGTGCGCACACGGCCATGCGGGCACCCGCCGCACCACTCGTGCCACGTCGGCGACTGTCCGCCCTGCGTCGTACTGACTGCGCGAGTTTGTTATGGGGGGCATGAGGAAAGAAAAACCATTCCCTGTTCGCAAGAAGAGTTCTCGTGCGGTCTTCCGTGCGGGAAGCCGCTGCCTTGCGGCAAGCACACCTGCATCAAGATATGTCACAAGGGACCGTGTGACACTGGCAAATGCAGCCAGCCGTGCACGGAGAAGCGTCCATCGTGCGGGCACACGTGCGCGGCGCCGTGCCATGCTGGCGCCGGCGGGGCGTGTCCTAGCACGGCGCCGTGCCGTCGTCTCGTGCGTGCCACGTGCCCGTGCGGGCGGCGATCCGCCGAGCGCGCGTGCTGCGACAACGCACGCGATCTCGCTAgAATCATGAGCCAACTGGCTGTGTCCAAGATGCAGGAAGGGGGTTCGGTCGACCTGAGCGATGTACAGCGTCCGGTCAACATGCTTAAAACACTGGAGTGTGACGACGAATGCCGTCAAGAAGCACGCAGCCGTCAACTGGCGCTCGCGCTGCAGATCCGCAACCCGGACGTGTCGGCGAAACTCGCACCGCGGTACAGCGAGCACGTTCGCGCGACCGCAGTGCGCGAGCCCGCGTTCGCTAATCACGTGCACGAGCGGCTCGCCGAGCTCGTGCAGCGCGCTAAGAACTCTAAACAGAAGACCCGGTCGCATTCGTTCCCGTCAATGAACCGTCAGAAGAGGCAGTTCATCCACGAGATGTGCGAGCACTTCGGCTGCGAGAGCGTAGCGTACGATGCCGAGCCCAATAGGAATGTTGTGGCCACCGCTGATAGAGAAaagTCGTGGCTGCCAGCAATGAGCGTAATGGAGGTGCTGGCGCGCGAGGCGGGCAAGCGGCGTGTGCCGGGGCCGGTGCTGCGAGCACCCGCCGCCGCGCCCGCTGCCTCCGCGCCTACACCGCTCGCCGCCACCAAGTACGTACACTGA
- Protein Sequence
- CHCAVSKTRVVPCERGVTAKWTCGAECGRVLSCGAHVCRRECHAPPCSECPLRPENVPTCPCGKTRIQKGQRKSCTDPIPLCDNICAKPLRCGPDEERHFCKEKCHEGECPVCPDSTHLQCRCGHSTREVPCRDLPEARNSVTCQRKCNKKLSCGRHRCREVCCAGGEHLCTVVCGRSLFCQQHRCEEYCHAGHCAPCPRLNFEEVRCECGAAVLLPPVRCGARPPVCDAPCVRTRPCGHPPHHSCHVGDCPPCVVLTARVCYGGHEERKTIPCSQEEFSCGLPCGKPLPCGKHTCIKICHKGPCDTGKCSQPCTEKRPSCGHTCAAPCHAGAGGACPSTAPCRRLVRATCPCGRRSAERACCDNARDLARIMSQLAVSKMQEGGSVDLSDVQRPVNMLKTLECDDECRQEARSRQLALALQIRNPDVSAKLAPRYSEHVRATAVREPAFANHVHERLAELVQRAKNSKQKTRSHSFPSMNRQKRQFIHEMCEHFGCESVAYDAEPNRNVVATADREKSWLPAMSVMEVLAREAGKRRVPGPVLRAPAAAPAASAPTPLAATKYVH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -