Basic Information

Insect: Asbolis capucinus
Gene Symbol: RREB1
Assembly: GCA_018249125.1
Location: DWJZ01014403.1:2577-7239[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0091 0.75 11.0 0.2 1 23 53 76 53 76 0.96

2 11 0.021 1.8 9.9 0.1 1 23 262 284 262 284 0.97

3 11 0.0011 0.095 13.9 0.4 1 23 293 315 293 315 0.99

4 11 0.00071 0.059 14.5 2.0 1 23 321 344 321 344 0.97

5 11 0.0029 0.24 12.6 1.6 1 23 701 724 701 724 0.96

6 11 0.00024 0.02 16.0 1.3 2 23 917 938 916 938 0.97

7 11 0.024 2 9.7 5.3 1 23 944 967 944 967 0.97

8 11 0.21 17 6.8 1.4 1 23 999 1023 999 1023 0.90

9 11 0.24 20 6.6 0.5 1 23 1048 1071 1048 1071 0.94

10 11 0.0018 0.15 13.3 0.2 2 23 1111 1132 1110 1132 0.96

11 11 0.027 2.2 9.6 5.3 1 23 1138 1160 1138 1160 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0091	0.75	11.0	0.2	1	23	53	76	53	76	0.96
2	11	0.021	1.8	9.9	0.1	1	23	262	284	262	284	0.97
3	11	0.0011	0.095	13.9	0.4	1	23	293	315	293	315	0.99
4	11	0.00071	0.059	14.5	2.0	1	23	321	344	321	344	0.97
5	11	0.0029	0.24	12.6	1.6	1	23	701	724	701	724	0.96
6	11	0.00024	0.02	16.0	1.3	2	23	917	938	916	938	0.97
7	11	0.024	2	9.7	5.3	1	23	944	967	944	967	0.97
8	11	0.21	17	6.8	1.4	1	23	999	1023	999	1023	0.90
9	11	0.24	20	6.6	0.5	1	23	1048	1071	1048	1071	0.94
10	11	0.0018	0.15	13.3	0.2	2	23	1111	1132	1110	1132	0.96
11	11	0.027	2.2	9.6	5.3	1	23	1138	1160	1138	1160	0.97

Sequence Information

Coding Sequence: ATGAAGATCGAACACGAGTCGAGAGCCACACGCACAACTAGCATCGACAGTGATAACAGATCAGATAGGAGCGAAGAAGAAGATTCCCGCAGAGCCCGCAAGAGAGCAGCCTCCAGTTCACCCTCTCCTATTCCATTAGACAAAAGGATCGCCAGATTCGAGTGTCCAAAATGCTGGCAGCGTTTTGATTCCATCAACGCATTTGAAATACACCGGTACACAGCACATGGTGAAGATGCCAGATCTGGATTCGATAATTTAGATTTTCCAAGCAAAAAATATCCCGAAATCACTAGAGGAGATCGTAAATCTCATCTGTCCATAAGTGATCAAAGATATAGGTGTGACTCATGCTTGCGTGATTTCCCAGGTGGACATGCACTTGATATCCATAGGAAGACATGCTCAGTGTCGACTAGGCTCTCTAGCCCTGACAGAGACCGCAGGGAGGACttcttttcaaaattagatCTCAGAAACAGATCATTTGGCATTCCAGGCACGTTAACACCGCCGATGGAGCGTTTCACACCCAAATTTGATGATGGACATGTAACAACAAACGGCATAAAACATATTGATGCGGCCAGAGACTTGGCAGACATTCAATCCATTTTAAATGTCACCTCAACGGGTAGCTTGTTGGAAAGACTAACCGGAACGCGAGTAGCCTTAGAAAGCTCCGTCCTAACGCCACCCGATACAGTAATTAAGGAACGTGAACAAGAAGAAACGCAAGATAATTTTGCTGCAGAATTCAGACGAATGAAACTGCGAGGTGAGTTTCCTTGTCGATTGTGTCCGGCCAAGTTTCCTAATTTAAGAGCTTTGAAAGGCCACAACAGAGTACATCTTAGTGGCACAGGTCCTGGCCCGTATCAGTGTAATATGTGTCCCCACGCCTCTTTGGATAAAGCAGCTCTTGTGCGTCACATGCGCACTCACAATGGTGACAGACCTTACGAGTGCGCCGTATGCAATTATGCTTTTACAACTAAGGCAAATTGCGAAAGACATCTACGTAATAGACACGCTAAAGTTACAAGGGAAGACGTCAAACGCTCAATAATATACCACCCATCGGAAGATCCCAATAACGATGAAGTGAATTCTAAAATTGCTCGTGAAGAAGTAAAAAGGTCGCTGGCATTTCACACGCCTGAAACTGAAAGACGTAATGATAGCACCGGACGAGATACCCCACTCACTCATTATACTCCCAGTTTCATCACAGACAGACATCCAGTTACTTCCTTGTCATCAAAACCTTTAAATCAATTGACTGAAATACCAAGTTTGACTCCTAAAGAGTACAATAAAGAGCCAGAGCAACCTTTGCCTAGAATTAAAGTAAAGGGTATTGGACAGCTGACACAAATACCAGACTTTAGACCACcagaaattacatttaaaacaaacgACATTTCGCCTCCAGATAATTATGATGAGGAAGCTCCTGTAGATCTCAGCACCAACGACAACAATAACTGTGATGTTCTTGATTTAAGTAAAAAGAAACGTGACGTAGATGAATCAGAAATAAAAGTCCCACCGAGACAAAGATTTGAACAAAATGCAGCATCTGTTGCCGCATCAGCTTATGAAAAAACACGATTCTTACTGGCTCAACAAAGTCTTTTTGAAAACACTCTACCAAAATTAGATCCTGCTTACTACGCATCTCAGCTGACTCAGCTTTATGCTGGTGCAGTGCCAGGTCTGCCTGGCTTGCCATTACCCCCTTCTTTTCCTATCAATCCGTACTTTCTTCCAACCTCTTTTTTTCCCCACCCAACTGACTCTCAAGAAGTTGCCGAAATAAAACAACGCATTCAAAAGGAAATTATACGGGGGCTTAGCATGTCGGGCGGCAGGCTCGTAACAAATGAATCGGAGATTCAACCGAAGCAAGAACCAGAAGAGGAAGACCAAAAGCCTTTGCCTCCGGTTGAGACTTCATCCACGCCACCACCACTTCCTGAATCTCCAAGGCCGTTGAGCAATAGTCTTGCACCCCAAAGCGACTCAGTTAAAATGGTCATTAAAAATGGCGTTCTCATGcctaaacaaaaacaaagacgTTATAGAACAGAAAGACCATTTTCATGTTCGCAATGCTCTGCACGCTTCACATTACGTTCTAATATGGAACGCCACGTGAAGCAGCAACATCCTCAACACTGGAGCGTTCGAAGACCAGGGCCAAGGGCTCCTCCACCTTATCCTACCACTGATGCTTTAGCGGATCGTGTTAAATACGCTCTCTTGGCCCGCCATCTCGAGAGACCTATACAACCAAATGAGGGTTCACCAATAAGAAGGGATTCCGATGAAGTTGCTGACAACGAAGAAGATGAAGATGATGCACTGGTGATAGATGAGGAGCCAGAAGATAGAAAGCCGGAAGAACATAGTGCTGCCCACCGAGCTGCCGCGGAAATACTAATGGCTTCCCGTCAACAAGAAATAACTAAagattttgatttgaaaatagCTGGCAATCTTATTAATAAACCCGTACCAATCAACAATGATAAAGAAGCACGAGGTGATGCCAATGTTTTACCAGAATCCCTGCCAGTATCAGTTGTCCCCACCCGAAGTGATGAAGAAGAAGATGAGGAAGGCCTAGTAGCTTCAACCAGCGAAGGCAACAATTCCGGAAGTGATGAAAATAAATCGGAGTCCGATACTGGAACCCAGCCACCGAAAAAAAAGTCTGCCTATAGCCTAGCACCAAACCGAGTATCGTGCCCTTACTGCCACCGAAAGTTTCCTTGGTCTTCGTCTCTTCGACGGCATGTCCTTACCCACACCGGCCAGAAACCTTTCAAATGCCCGCATTGTCCTTTACTCTTCACTACAAAATCCAACTGCGATCGCCACTTGCTAAGGAAACATGGCGGATCTGCTAGAGCTATTCTAGCAGAACCCATCCCTGATACGGTGACTCAGCCCCAACCAGTCAATGATAGGGCTGTCCCAGACAGACCTTTCAAGTGCGCTTCGTGTCCCACCAGTACCTTTTCCTCAATGGAGACTTTGAAGAAACACATGTCTTCTCGTCATGGCACTGGAGATTCCCAGCCTCCTTCGCCCAATCCCGAAATAATTGAGGACGGTGGAGATGGCAGTTTGGTCTTCAAGTGTCATTTATGTGAGGCATCCTACAACGAAAGGAGTGGCGCCTTGAGCCATCTGGCGTCTAGCCACGCGACGGAGTACGATCAGCTGGTGAGCAAAGGCGCTTTGGACGCAGCCAGTGACAGAAGCGAGAgcgctgatgatgatgaaaggGGGAAGTTTCCGGATCATGCCAATAGGAAGGTGGTCTGTGCATTCTGCGTCCGTCGTTTCTGGTCTGCGGAAGACCTTCGACGTCACATGAGAACTCATTCCGGCGAGCGTCCCTTCGCCTGCGATCTCTGTCGCCGGCGGTTCACTCTCAAACACAGCATGCTGAGACACCGCAAGAAACATCGCGAGGAAGTCACTGATGATGAAGAGGCGTCTCCTCCAAACACGCCTGAGGAAACCGTTACTAATGGATTCCGCTACCAAGATGACGATGGGTCTGGCAGTGAGATACCAAACAACGTAAACAATAATAACTCACCGCCCTCTGTGCATTACGATAAGAAACTTAAATTAGAGATGACGTCACGCAAATATTCTTCGGAAACTGAAAACGACACGGAAAATGGTGGCGATCTCATCGGAAAACTTCTCGGCATCCCTGACAAAACCATCATCAACAAACTTCTCTCATCCGCGGATGAGGCAGCGAAGTTCCTTGGAGTGAACAAATGA
Protein Sequence: MKIEHESRATRTTSIDSDNRSDRSEEEDSRRARKRAASSSPSPIPLDKRIARFECPKCWQRFDSINAFEIHRYTAHGEDARSGFDNLDFPSKKYPEITRGDRKSHLSISDQRYRCDSCLRDFPGGHALDIHRKTCSVSTRLSSPDRDRREDFFSKLDLRNRSFGIPGTLTPPMERFTPKFDDGHVTTNGIKHIDAARDLADIQSILNVTSTGSLLERLTGTRVALESSVLTPPDTVIKEREQEETQDNFAAEFRRMKLRGEFPCRLCPAKFPNLRALKGHNRVHLSGTGPGPYQCNMCPHASLDKAALVRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHAKVTREDVKRSIIYHPSEDPNNDEVNSKIAREEVKRSLAFHTPETERRNDSTGRDTPLTHYTPSFITDRHPVTSLSSKPLNQLTEIPSLTPKEYNKEPEQPLPRIKVKGIGQLTQIPDFRPPEITFKTNDISPPDNYDEEAPVDLSTNDNNNCDVLDLSKKKRDVDESEIKVPPRQRFEQNAASVAASAYEKTRFLLAQQSLFENTLPKLDPAYYASQLTQLYAGAVPGLPGLPLPPSFPINPYFLPTSFFPHPTDSQEVAEIKQRIQKEIIRGLSMSGGRLVTNESEIQPKQEPEEEDQKPLPPVETSSTPPPLPESPRPLSNSLAPQSDSVKMVIKNGVLMPKQKQRRYRTERPFSCSQCSARFTLRSNMERHVKQQHPQHWSVRRPGPRAPPPYPTTDALADRVKYALLARHLERPIQPNEGSPIRRDSDEVADNEEDEDDALVIDEEPEDRKPEEHSAAHRAAAEILMASRQQEITKDFDLKIAGNLINKPVPINNDKEARGDANVLPESLPVSVVPTRSDEEEDEEGLVASTSEGNNSGSDENKSESDTGTQPPKKKSAYSLAPNRVSCPYCHRKFPWSSSLRRHVLTHTGQKPFKCPHCPLLFTTKSNCDRHLLRKHGGSARAILAEPIPDTVTQPQPVNDRAVPDRPFKCASCPTSTFSSMETLKKHMSSRHGTGDSQPPSPNPEIIEDGGDGSLVFKCHLCEASYNERSGALSHLASSHATEYDQLVSKGALDAASDRSESADDDERGKFPDHANRKVVCAFCVRRFWSAEDLRRHMRTHSGERPFACDLCRRRFTLKHSMLRHRKKHREEVTDDEEASPPNTPEETVTNGFRYQDDDGSGSEIPNNVNNNNSPPSVHYDKKLKLEMTSRKYSSETENDTENGGDLIGKLLGIPDKTIINKLLSSADEAAKFLGVNK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00961349;
90% Identity: iTF_00887712;
80% Identity: -