Acap008074.1
Basic Information
- Insect
- Asbolis capucinus
- Gene Symbol
- Zfy1
- Assembly
- GCA_018249125.1
- Location
- DWJZ01004553.1:2951-8852[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 3.1 2.5e+02 3.1 0.6 1 23 176 201 176 201 0.75 2 15 0.83 69 4.9 4.3 1 23 249 271 249 271 0.94 3 15 0.017 1.4 10.2 0.0 6 23 283 301 283 301 0.97 4 15 0.37 31 6.0 0.0 2 23 310 332 309 332 0.96 5 15 4.8e-06 0.0004 21.4 0.4 2 23 357 378 356 378 0.97 6 15 0.0005 0.041 15.0 1.7 1 23 385 408 385 408 0.97 7 15 0.29 24 6.3 0.1 1 23 414 436 414 436 0.89 8 15 1.1e-05 0.00093 20.2 0.9 1 23 442 464 442 464 0.98 9 15 0.33 27 6.2 3.4 1 23 629 651 629 651 0.95 10 15 8.3e-05 0.0069 17.5 2.0 2 23 658 680 657 680 0.92 11 15 1.2e-05 0.001 20.1 0.8 1 23 686 708 686 708 0.98 12 15 1.1e-06 9e-05 23.4 1.9 1 23 714 736 714 736 0.98 13 15 0.00011 0.0093 17.1 1.2 1 23 742 764 742 764 0.97 14 15 0.00067 0.055 14.6 3.0 1 23 770 792 770 792 0.93 15 15 0.0068 0.57 11.4 4.6 1 23 798 821 798 821 0.92
Sequence Information
- Coding Sequence
- ATGAGTACTAAACCTGAGGATTTTCCTGATTTAAAGCCAGATATAccaataaagttaaatatacgTTACCCTGATGTTTTAACGCCTGAACGTCTGGCAATGAGGTACAACTACAGCCATATGTGTAGACTATGTGCTGTGGAATCACCTAATGTCATCCCACTGTTCAAAGGCGACGGCAAGAAATATGATATACCCGGCAAGATAAGAAAATACCTTTCTTTAAGGGTGCTGGCTTCAGAGTTCATGCCTGACCAAATCTGTGAGCCCTGTGCCAGCACTCTGCTATCATGGCATGAGCTGGTGCGGAGCGCCCGTCTGGCTGACTTCTTACTGCGCCGTCGTGTAGGCTCCACTAGCATCGCAACTATACCGTCGCCGCCGCCCAGCACCAGCTCAGGCACTGAAGTCATCAAGAATGGAGttaaGTGTGTATCGCCGGCTTTGTTGACATCtatagtaaaaaatgtattgtctaaTTATTTCTACTCACTGAATATCGACGCAGACAATGCGGACTTCGAATATGTTTGCCAAATATGTGACGCGACCTCTGTCGGAAGGACATTCGAGGATTTAACCGAACATTTAACGACTACTCATGAGTCTGCCATAGACAGCGAGCGATCGATAGAGGATTTCATTAAGAGCAACATAACCTTCGAGGAGACCTTAACATTTGACGAATCCTTCGAAGGTGACCCTGTGAGCGTGGAGGATGCCAGTGACGTGTCCATCCCGCAGTTTTGTTGCCCGTATTGCGAAAGCGTTTTTTCCTCCCCTACGAGATTGCTATGTCATCTCAGCAAACATGTGAACTTCGACAACGACGACGGTGTTTCATGCTGTGGCACCGTCTATAGCGACAGAGAGTCTCTCGCGACGCATCTCCGGGAACAACATGCTCGATGCACATTTAACGAAACCACATGTCGAACGTGCGGATTTGTCGCCGAGGATGATGAGGGATTGCAAGAGCATATTAACAGAGTTCACGTTGAAGCTAAGACAATCTCGGCGGACCGAGATAAATCAAAACCTTCagggtgtcaaaaatatattcgcGTTGAGTGCCCCGACTGCAATAAGTTATTCTCGAATAAGTACAACATGCTAGTCCACTTGAGGAGTCACAGAGAAAAGCCAGGAAAATTTAAGTGTGAACCCTGCGACAAAATCTACAGAAGTCGAGGGAGCCTCACGCATCACCGGAAGGTGGTGCACGAGGGGGAGATGCGATACGTATGCACATCGTGCGGGGAAGGCTTCCCGTCACGCCTGGCTAGGGACGTGCACGCGCGTCTTCACACGGGATTCAAACCGTACTCTTGCCAATATTGCGGAAAGTCGTACAGAGCTCAAAACACTCTAAACAGACACGTTGAAATGCATCTCGACGTTAGAAAATATCCATCGTCGCTTCATAACGACCTCCAAAGGTTTGAGTTGACGGGGAAGGAAATCGCTTCAGATTATATCGATCATAGCGTAGACGAATCCAACATTCGGGATCGACTCGATAATCAAATAGACTGGACCGATGAGCCGGAACGCTGCGAGGATCAAGATTCATTTTCTGGGGACGACTCTCCGCTGTCGAATATCGCTATCAAAAAATCAACCGAACTCTACGACAGATTTTATACAGCGCTAGTCAATTTCAGAAACCACCTCGAGGGCGAGCACGACTCACAGGAATGCTCATACCCAGATTTTTCAGAATCGAATGATTCCGGGGGCGAGATTGACACGCGCGAAACCGACGAAGTGGACGTTAACATGTATGATGATCTCACGCAGAGCAACATGAGGAAAGATCAAATGAATGAGGAAACCCGGCTCGAGCTGAGCGAGGTGCGCACCAAGATCGATGGGAAGGTGTACTACTCGTGTAGGGTATGTGGGAAGAACCTAAGCTCGTCGCACACTTATCTCTTCCACAAGAGGATCCATACTGGAGAGAGGCCGTGCGTGTGTCACGTTTGCGGCAAGCAGTTTCGTGCACCGAGCGGCCTGCAGCGCCATCTTACTGAGACACACGAGAGGGTGCGTCGATATTCGTGTACCCTGTGCCCCAAGATCTTCGTGAACCTACAAAACCTAAAGCAACACTTTCGAATTCACACCGGAGAGCGACCGTTTGAGTGTTCTCAGTGCGGCAAACGGTTCACGCAGAGTGGCAGCTTGCACGTGCACGCGAGAACCCACAGTGACCGGCTGCCACACGAGTGCACGGAGTGTGGCGCCAAGTTCAAGCTGCGGTCGGGGTTAGCACGACACCGGTTAAGACATACGGGAGAGCGGCCGCACGCTTGCACCCTTTGCGGGATACGGTTTAGACAACGGCACGACCTCAACTCGCATGTGTTGTTCCACTCGGACGCCAAGCCGCACGCTTGCGGCGTGTGTGGTGCTACTTTTCGTCAACGTAAGGCGCTTCGACACCATTGCAGGCGCGTGCACGAGAGCGAACCTCCCGCCGCCCCAACTCCCGCTGCTCCCGCCCCTGATATAGCGCAACAGGTCACCTACAACCATGTACAGCCCTACTACAAAATACTGccttaa
- Protein Sequence
- MSTKPEDFPDLKPDIPIKLNIRYPDVLTPERLAMRYNYSHMCRLCAVESPNVIPLFKGDGKKYDIPGKIRKYLSLRVLASEFMPDQICEPCASTLLSWHELVRSARLADFLLRRRVGSTSIATIPSPPPSTSSGTEVIKNGVKCVSPALLTSIVKNVLSNYFYSLNIDADNADFEYVCQICDATSVGRTFEDLTEHLTTTHESAIDSERSIEDFIKSNITFEETLTFDESFEGDPVSVEDASDVSIPQFCCPYCESVFSSPTRLLCHLSKHVNFDNDDGVSCCGTVYSDRESLATHLREQHARCTFNETTCRTCGFVAEDDEGLQEHINRVHVEAKTISADRDKSKPSGCQKYIRVECPDCNKLFSNKYNMLVHLRSHREKPGKFKCEPCDKIYRSRGSLTHHRKVVHEGEMRYVCTSCGEGFPSRLARDVHARLHTGFKPYSCQYCGKSYRAQNTLNRHVEMHLDVRKYPSSLHNDLQRFELTGKEIASDYIDHSVDESNIRDRLDNQIDWTDEPERCEDQDSFSGDDSPLSNIAIKKSTELYDRFYTALVNFRNHLEGEHDSQECSYPDFSESNDSGGEIDTRETDEVDVNMYDDLTQSNMRKDQMNEETRLELSEVRTKIDGKVYYSCRVCGKNLSSSHTYLFHKRIHTGERPCVCHVCGKQFRAPSGLQRHLTETHERVRRYSCTLCPKIFVNLQNLKQHFRIHTGERPFECSQCGKRFTQSGSLHVHARTHSDRLPHECTECGAKFKLRSGLARHRLRHTGERPHACTLCGIRFRQRHDLNSHVLFHSDAKPHACGVCGATFRQRKALRHHCRRVHESEPPAAPTPAAPAPDIAQQVTYNHVQPYYKILP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -