Acap007887.1
Basic Information
- Insect
- Asbolis capucinus
- Gene Symbol
- -
- Assembly
- GCA_018249125.1
- Location
- DWJZ01004403.1:10177-12949[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.0057 0.47 11.7 2.5 1 23 109 132 109 132 0.94 2 13 0.25 20 6.5 0.3 1 21 199 219 199 220 0.95 3 13 3.1e-05 0.0025 18.8 2.0 2 23 247 269 247 269 0.95 4 13 0.36 30 6.0 5.6 1 23 277 299 277 299 0.98 5 13 0.00092 0.076 14.2 1.8 1 23 307 330 307 330 0.94 6 13 0.00032 0.026 15.6 0.9 1 23 336 358 336 358 0.97 7 13 5.8e-05 0.0048 18.0 3.2 1 23 364 386 364 386 0.98 8 13 1.7e-06 0.00014 22.8 1.8 3 23 394 414 392 414 0.96 9 13 5.8e-06 0.00048 21.1 0.8 1 23 420 442 420 442 0.99 10 13 2.4e-08 2e-06 28.6 0.4 1 23 448 470 448 470 0.98 11 13 9.4e-05 0.0078 17.3 0.7 1 23 476 498 476 498 0.98 12 13 0.00011 0.0095 17.0 3.4 1 21 504 524 504 526 0.96 13 13 5.8e-06 0.00048 21.1 0.1 1 23 532 554 532 554 0.98
Sequence Information
- Coding Sequence
- ATGGAATCCACTGTTAAGCCGCGCGTAGATTCCATTTGCCGCGCGTGTCTGTCTGACTCCGGCGTTATGAGGCCGTTGTACGAAAAAATGGATGGAGACGACCGAACTCTTTTCGAGGTGCTCTCCTTCGTTACCAACATCAACGTTACCTCCAACGACGGCTACCCTAAACAGCTCTGCGATGATTGCTTCACTCTCATGTGTAAAACAGACGAATTCAAGAAAACCTTTATGAAATCTGAAAGCGTTTTAAAAGTGATGTTCAAGGGAGGCAAAGTCGACAATGGCGTCAAAATAGAAGCCAGTAAGTCGGGATTAGAACCTTTCCAGTGTACTATATGCTTCGAGAAGTTCATGACTTGCGCGTCTCTAGAATCCCACGTAATGTTTACTCATTACTGTGTCAAAGACTCAAATAAGGAATTGGAAAACCTGAATGAACTAGCGATGGCTGGCTTAGCATGTGATACTGGTGTTAGCAAACCATATGAGGTGAAGGAGGAGAGTGATATAGGGGCTGCAGATTATACAGAATACTTTGACGTTGATACAAATTACGCAGAGACAGATTATAAGCAAGAGGAGGACAAAGCTTTTGAATGTAATACATGCAGCCTACCATTCTTAGATGAAAAAGATTACAAAACGCATATCAAAAACTGTAATGTTTCCATCGCACGTTTACCATTGCGAACAAAGTTCAAAAAGGCCATTAAACAAGCAGTGAAGAAGAAAGAATCGTGTTCTAAATGTGAAACTACTTTCTCATCCCTCAAATCACTGAGACGTCACCAACGTGAGATACACAAAGACGGATCAGAAGAAATATATCATTGCACAACTTGCATGCGTTCATTTCTGCGAAAGAACTCATTTTTATCTCATATGAAAATGCATCAATCCAAGGATCACTTAAAATACATCTGTAACACTTGTAAACGAGAGTTTCAGCATCAGGCACATTTAGATAACCATATACTAGCAGTACATACACGCGACAAAGGATATAGCTGCGAAATCTGCAGTGTAAGCTTCACCACATTAGAATGTTTGAATATACACAAAGCGATGCACAAAGTTGAAAAGAAACATCAGTGCAAACTGTGTAACAAGGGGTTCCAGATGATGTCGACTTTGAACGAGCACATGAGAACACATACAGGGGAAAGGCCTCATTTATGCTCCATATGTGGACGAGGGTTTACACAAAAGAACAACTTGGAGCAACATGTGAGGCGGCATAAGGGACTTAAGCCTTTTAAATGTGACACTTGTGAAAGAAGATTTGTATCAAAAGGTGAACTGGTCGCCCATACTCGCAAACACAGCGGCGCACATCCATTCGTGTGCGACGATTGCGGCAAAGGATTCACCACCTCCAGCTCGCTGGTGAAGCACAGGAGAATCCACACCGGAGAACGCCCATATGCCTGTGACCTTTGCTCAATGAGATTCTCCGCTTCAGGCACCTTGAAAAACCATAGACGTACTCACACAGGAGAGAAACCTTACCAATGTTCTCATTGTGAAAAGGCTTTTGTGCAGCGGCAGGACTTGGTTTCGCATATACGCTGCCACACCGGTGAACGTCCCTATGTGTGTGCTAACTGCGGCCAGGCCTTCAGGAAAGCCTCCGCTCTGAAGACTCATGTGAAGATACACGGTAAGGACGGTAACTCCACTCTGACCTTGTCATCGCTGCAGGATGTCAACGTATTGTTGACACATGTCAGCTAA
- Protein Sequence
- MESTVKPRVDSICRACLSDSGVMRPLYEKMDGDDRTLFEVLSFVTNINVTSNDGYPKQLCDDCFTLMCKTDEFKKTFMKSESVLKVMFKGGKVDNGVKIEASKSGLEPFQCTICFEKFMTCASLESHVMFTHYCVKDSNKELENLNELAMAGLACDTGVSKPYEVKEESDIGAADYTEYFDVDTNYAETDYKQEEDKAFECNTCSLPFLDEKDYKTHIKNCNVSIARLPLRTKFKKAIKQAVKKKESCSKCETTFSSLKSLRRHQREIHKDGSEEIYHCTTCMRSFLRKNSFLSHMKMHQSKDHLKYICNTCKREFQHQAHLDNHILAVHTRDKGYSCEICSVSFTTLECLNIHKAMHKVEKKHQCKLCNKGFQMMSTLNEHMRTHTGERPHLCSICGRGFTQKNNLEQHVRRHKGLKPFKCDTCERRFVSKGELVAHTRKHSGAHPFVCDDCGKGFTTSSSLVKHRRIHTGERPYACDLCSMRFSASGTLKNHRRTHTGEKPYQCSHCEKAFVQRQDLVSHIRCHTGERPYVCANCGQAFRKASALKTHVKIHGKDGNSTLTLSSLQDVNVLLTHVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00971546;
- 90% Identity
- -
- 80% Identity
- -