Basic Information

Insect: Asbolis capucinus
Gene Symbol: -
Assembly: GCA_018249125.1
Location: DWJZ01000299.1:6657-9771[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 2.8e-05 0.0023 19.0 0.2 3 23 153 173 151 173 0.96

2 12 8.1e-05 0.0067 17.5 0.2 1 23 179 202 179 202 0.96

3 12 5.9e-06 0.00049 21.1 0.7 1 23 208 230 208 230 0.98

4 12 1.5e-06 0.00012 23.0 1.2 1 23 236 258 236 258 0.99

5 12 0.00089 0.074 14.2 5.4 1 23 264 286 264 286 0.99

6 12 6.7e-05 0.0056 17.8 4.8 1 23 292 315 292 315 0.96

7 12 5.1e-05 0.0042 18.1 4.0 1 23 321 343 321 343 0.97

8 12 8.2e-06 0.00068 20.6 0.6 1 23 349 371 349 371 0.98

9 12 4e-05 0.0033 18.5 3.4 1 23 377 399 377 399 0.99

10 12 2.7e-07 2.2e-05 25.3 3.6 1 23 405 427 405 427 0.98

11 12 8.8e-07 7.3e-05 23.7 0.5 1 23 433 455 433 455 0.98

12 12 0.28 24 6.3 2.5 2 23 461 479 460 479 0.84

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	2.8e-05	0.0023	19.0	0.2	3	23	153	173	151	173	0.96
2	12	8.1e-05	0.0067	17.5	0.2	1	23	179	202	179	202	0.96
3	12	5.9e-06	0.00049	21.1	0.7	1	23	208	230	208	230	0.98
4	12	1.5e-06	0.00012	23.0	1.2	1	23	236	258	236	258	0.99
5	12	0.00089	0.074	14.2	5.4	1	23	264	286	264	286	0.99
6	12	6.7e-05	0.0056	17.8	4.8	1	23	292	315	292	315	0.96
7	12	5.1e-05	0.0042	18.1	4.0	1	23	321	343	321	343	0.97
8	12	8.2e-06	0.00068	20.6	0.6	1	23	349	371	349	371	0.98
9	12	4e-05	0.0033	18.5	3.4	1	23	377	399	377	399	0.99
10	12	2.7e-07	2.2e-05	25.3	3.6	1	23	405	427	405	427	0.98
11	12	8.8e-07	7.3e-05	23.7	0.5	1	23	433	455	433	455	0.98
12	12	0.28	24	6.3	2.5	2	23	461	479	460	479	0.84

Sequence Information

Coding Sequence: atgagTGAAAACTTTAACTTAAATGAAATATGTCGTTGTTGCCACACTCAGGGCGTGTTTAAAAGTCTTACAACTCCTTATTGCCAAGAACGAAGTGAAGAAACATACTCGAATATGTTGAAAGAAACTTTTGATGTGGTTTTGACAACAATTGTACAAGGTAGTAGCAACAGTGTGTCCATGATATGCAACACATGCATATGTAGGCTCCTTGATGCTGATAAGTTTAAGCAACAAGTGCTGTTGTGCGAACAAACATTGCAACAATTTTACAATCAGTTCAATGAAAAGGAAGATAAAACTCCTTTGGGAATGTTTACACAAGCAGTGGATATAGATGACCAACCACTGTCGGCTTTGAAGGTGCAGGATACCCACGAAGAGTGGGAGCTGCCTGATAACACCGATGATGAAGAATCTAAACCGGCAACCCAAatggaaagaaagaaattagCCTGCACCATATGTCTAAAACAGTTTACATACAGTGGATCATTAGAGGTTcacatgaaaatacatacaGGGCTGGCACTTTATCCATGCCGCATTTGTAATGGTAGATTTTCCAATAATAAGGAGCTTATCAACCACATTTCTTCTGACCACTCAGACAAAGGAAAGTTCCCATGTAAAGTTTGTACAAAGACATTTGACAAGGCCAGGCAGCTGAAGGTTCATTTAAACGTGCACTTTGATAGTGATCAGTTTAAGTGTCCAGAGTGCAGTAAGATATTTCAAAGGCGCAAAGGTCTAAAAGACCACATGAAGATTCATTCAGGGGAACGGAACTATAAATGTACTATTTGTAGCAAATCATTTGGACATAATCAAACATTAGTGTGCCATATTCGGACACATACGGGAGAAAAGCCATTTGTATGTGAAGTCTGTGGCAAAAGTTTTCTTCAACACACACATTTAAAACGGCACATGCACATAATCCACACAAGGCTTAAGCCTCATTCGTGTAAAGTCTGCCAGAAGCAATTCTCGACCAAGAGCTACTTGTCCATACACGAGAGACAGCATACGGGGGTCAAACCTTACTCTTGTGAAGTTTGTAAAAGAGATTTCTCAGCATACAATAATCTAAAAGTACATATGAGGGTTCACACTGGTCAAAAGCCGTACTCCTGCAGTTTCTGTGACAAACAATTCACACAAACTTCCAGTTATAGACTTCACGAGAGAACACACACTGGAGAAAGACCTTTTTGTTGCAAAATTTGCAAGAAAACGTTTTCTGATAATGGTTACTTGAAGATTCATATGAGAGTTCACACTGGAGAGAAACCTTTCATCTGTGAGGTGTGTGATCGGGCTTTTCGGGAGATGGGTCAGTTAAAACGACACATGAAAACACACAACCAGATTAAATTGACATGTAACGTATGTAATAAGCAGATAGGGAATTTAACTAAACATATGAAAATACATTCTGTTGAAACACATAAACGTACAGTGCGAGTGAAGAAAaagcatattaattaa
Protein Sequence: MSENFNLNEICRCCHTQGVFKSLTTPYCQERSEETYSNMLKETFDVVLTTIVQGSSNSVSMICNTCICRLLDADKFKQQVLLCEQTLQQFYNQFNEKEDKTPLGMFTQAVDIDDQPLSALKVQDTHEEWELPDNTDDEESKPATQMERKKLACTICLKQFTYSGSLEVHMKIHTGLALYPCRICNGRFSNNKELINHISSDHSDKGKFPCKVCTKTFDKARQLKVHLNVHFDSDQFKCPECSKIFQRRKGLKDHMKIHSGERNYKCTICSKSFGHNQTLVCHIRTHTGEKPFVCEVCGKSFLQHTHLKRHMHIIHTRLKPHSCKVCQKQFSTKSYLSIHERQHTGVKPYSCEVCKRDFSAYNNLKVHMRVHTGQKPYSCSFCDKQFTQTSSYRLHERTHTGERPFCCKICKKTFSDNGYLKIHMRVHTGEKPFICEVCDRAFREMGQLKRHMKTHNQIKLTCNVCNKQIGNLTKHMKIHSVETHKRTVRVKKKHIN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00795881;
90% Identity: -
80% Identity: -