Basic Information

Gene Symbol
Cdc5l
Assembly
GCA_018249125.1
Location
DWJZ01002439.1:11055-19210[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.3e-17 4.3e-14 53.1 1.8 2 46 9 54 8 54 0.97
2 2 3.9e-12 4.9e-09 36.8 0.1 1 45 60 103 60 104 0.93

Sequence Information

Coding Sequence
ATGCCTCGAATTATGATAAAAGGTGGCGTTTGGCGCAACACCGAGgATGAGATCTTGAAAGCAGCTGTAATGAAATATGGGAAAAACCAGTGGTCACGTATTGCGTCCCTGCTTCATCGGAAGTCTGCGAAGCAATGTAAGGCTCGTTGGTACGAGTGGTTGGACCCTAGTATCAAGAAGACAGAGTGGTCACGCGAGGAGGACGAGAAGCTGCTACATCTGGCCAAGCTGATGCCGACTCAGTGGAGGACCATTGCTCCAATAATTGGACGTACAGCTGCCCAATGCCTAGAGCGATATGAATACCTACTTGATCAGGCACAAAAGAAGGAAGAAGGTGAAGATATGGGAGATGATCCTAGGAAGTTAAAGCCCGGAGAGATAGACCCTAATCCTGAGACCAAACCAGCTAGACCTGATCCTAAAGACATGGACGAAGATGAACTGGAAATGCTCTCGGAGGCGCGAGCGCGTCTTGCCAACACTCAGGGCAAAAAGGCAAAACGGAAAGCTAGAGAAAAGCAGTTAGAAGAGGCACGTCGTCTTGCTGCATTGCAGAAGAGGAGAGAACTGAGTGCTGCAGGAATTGCTGTGCCAATCAGgAAGAAGAAGAAGCGAGGTGTAGACTACAATTCTGAGATACCATTTGAAAAAAGGCCTGCTGCAGGATTCTATGATACATCCACAGAAGTTGTGGACCCGATGGCACCTGATTTCTCTAGACTACGGCAACAACATTTAGATGGAGAGCTGCATTCAGAAAAAGAGgagAGAGATCGTCGTAAAGACAAACAGAAGTTGAAACAGCGCAAGGAGAATGATGTGCCCCAAGCGATGCTGCAGGGAGACCAGCCAGCGAGGAAGAGAAGCAAACTTGTGCTGCCTGAGCCACAAGTCACTGACCAGGAGCTGCAAGCGGTGGTGAAACTGGGCCGCGCGGGGTCTGCGGCTCGAGAGGCGGCTGGCGCTGCAGGCGCTCCCACAGACACTCTTCTCGCGGCGTACGCGCTCTGCCCAACTCCCGCCACTGCGCTGCGCACCCCCGCCGCGCCCACTGACAGGGTCCTAATGGAAGCGCAGAACGTGATGGCGCTGACCCACGTGGACACACCGTTGAAGGGCGGCGCCAACACGCCGCTCGCCGCGCCGCTAGCCGCGCCCGCCGCCACGCCCAACACGCTGCTCGTCACGCCATTCAGaTCGTCGCGCAGTGAAGTATCAACGCCAGGCAGCTTTGCCACTCCGGGCCACGGCACAGGACAAACTGGACTGATGACTCCGGGCTTGAGGGACAAGCTCAGTATAAATCCCGAGGATCAGCTGAGCGTTGGCGACACTCCGCAGATGGTACAAAAACAGGTGAAAGCATCAGTCCGCAATGCGTTATCGTCGCTGCCAGCGCCGCGCAACGACTACGAGATCGTGGTGCCAGACGGGGAGGGTGCTGAGCCGAGCGTGGCCACGCCCACCGCTGTGGAGGACCAGGCTGATGCTGACGCACGACTCGCTAGGGAGGCTGAGGAGAGACGCGTAGCCGCCCTGGCCCGTCGCTCGAGCGCGGTCCGGCGTGGCGCGGCCCGACCGCTGGAGGTGGACGCAGCCGCGGCACGCGCCGCCCCCACCGGTCTGGCGCCACTGCAGCGCGCCGAGGAACTGCTGCGGGCGGAAATGCTCGCCATGCTGCACTATGACGCTTTGCATGATCCGCCGACtggtatgaaaaaaatcttgaaacaGTTGGCGCTAGTAGAATTGTGTAAAAAGTTATACAAATGGCGCTAG
Protein Sequence
MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEDEKLLHLAKLMPTQWRTIAPIIGRTAAQCLERYEYLLDQAQKKEEGEDMGDDPRKLKPGEIDPNPETKPARPDPKDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELSAAGIAVPIRKKKKRGVDYNSEIPFEKRPAAGFYDTSTEVVDPMAPDFSRLRQQHLDGELHSEKEERDRRKDKQKLKQRKENDVPQAMLQGDQPARKRSKLVLPEPQVTDQELQAVVKLGRAGSAAREAAGAAGAPTDTLLAAYALCPTPATALRTPAAPTDRVLMEAQNVMALTHVDTPLKGGANTPLAAPLAAPAATPNTLLVTPFRSSRSEVSTPGSFATPGHGTGQTGLMTPGLRDKLSINPEDQLSVGDTPQMVQKQVKASVRNALSSLPAPRNDYEIVVPDGEGAEPSVATPTAVEDQADADARLAREAEERRVAALARRSSAVRRGAARPLEVDAAAARAAPTGLAPLQRAEELLRAEMLAMLHYDALHDPPTGMKKILKQLALVELCKKLYKWR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01152973; iTF_00025196;
90% Identity
iTF_01152973;
80% Identity
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