Acap015949.1
Basic Information
- Insect
- Asbolis capucinus
- Gene Symbol
- -
- Assembly
- GCA_018249125.1
- Location
- DWJZ01014025.1:953-5361[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-07 0.00022 21.6 0.1 1 38 81 118 81 124 0.91 2 2 1.2e-05 0.02 15.3 0.0 4 34 157 187 155 197 0.86
Sequence Information
- Coding Sequence
- ATGGAGCTGCCACTGGAATACCATAATGCGGAGAACGATCACCTTCATGATCACGATTATGATGGTGAACTTGGTACTGGAGTCGGAAGTTTTCTTGACGAAGCGAAACCAGATGACCCTATAAAAGTAATCAAGCTGGAATCTTCACCAACCTGGAGTGTAGCTTCCAAATGTAAGAGGACCTACACCAGACGAAGGACGCGTCCCAGCGAGACTATACCCAAGAAGTACAAGCAGTACACTGAGGAGGACATCCAGAGAGCCATGGAGGCGGTGGCTGGGAAGACCATGTCGCAGAATACTGCTTCCAAGACATTCAAGGTGCCTGTTCGAGTCTTAGCAAGTGCTGTCAAGAgttATGTCAAAATCAAACAAGAGAATGACAGCGAAAATACGTTAGGTTCGAAAAAGTCAAATACCAGGTCTGGTAATACCAAAGAGAAGAGAAAACAGCTGTATCCAGAACAAAATCTGCTGCAGGCCTTCGAGGAGGTCTGTAACAGGCGCATGACGCAGACCGAGGCCTCCAAATACTATAAAGTTCCAAGATCTACCATCTTTGATATGATTAATAAAAACCTAGGCAAGACTCGTCCACTGAAGAAAAAGAATGATGGTCCACAGGAAATGGTGAAGCACACCACCAACATCCTCACCATCATGGAGAACTCCAATGCTACTCCCATCCGCTGCCATCGAGACGGGGGCTATGTCTGCTGCTTCTGCACCCACCAGTATCAGAAACCGAACGACCTGAAAAACCATACTTTATTTAGTCATGACTTTAAAACCAAGAGGACACTCACTAAAGGAAAAAGACCATCTTCCTACTTCGTCAAGTTGGATATTTCTTACCTGAAATGCACCATCTGTAACTCAGAAATGGATTCCCTAGAAAAGTTAATTGACCACCTTGTTAAAGACCATCAGAAACCTATGTACactgatattaaaaatcatatattaccaTTCAGATTTGAGAGCGATGAACTGAAGTGTACGGTGTGTTTCAATGTGTACAACAAATTCAAAGTACTCCAAGAacatttaaacatacattatcaGAACTATGTGTGTGAAGTATGTAATGCTGGCTTCGTTTCAAGAATGATCCTCCACAACCATACAAGAGGGCACAAGACCGGTGTTTTTACTTGTGAAGTGTGTCTAAAAGTGTATTCAACTCTCCGTAAACTAAATTATCATAAGAACTTAGTGCATAGACATTCTTATTTAGTGAGCAAGTGTGGTTATTGCAACCAAAAGTTTAAATCATACCACCGTAAGCTGGAACATTTGACGGAAGTGCACAATATGAAACCCATGACATATACTTGTAAGGCTTGTAATAGGAATTTTAATACTCAGGCAGCGCTTAGAGTGCATAGGAAACGCGATCATTTAATGGAAAGGAAGCATAAGTGTACAGAATGTGAAATGGACTTCTTTGCTAGAGCGGAACTGAATCATCATATGTTGAAACATACTGGGTTGAGGGAGTTTCAGTGTGACGTGTGCCAGAAGTTGTTTAAGAGAAAGTTTACTCTCACCGAACATATGCGGATACATGAGAATGACTGTAGGTTTAAGTGCGAGCAGTGTGGGGCAGCATTTGTTCAGAAATGTAGTTGGAAGGGTCATATGCGGAATAAACATGGAATCATTAGCTGA
- Protein Sequence
- MELPLEYHNAENDHLHDHDYDGELGTGVGSFLDEAKPDDPIKVIKLESSPTWSVASKCKRTYTRRRTRPSETIPKKYKQYTEEDIQRAMEAVAGKTMSQNTASKTFKVPVRVLASAVKSYVKIKQENDSENTLGSKKSNTRSGNTKEKRKQLYPEQNLLQAFEEVCNRRMTQTEASKYYKVPRSTIFDMINKNLGKTRPLKKKNDGPQEMVKHTTNILTIMENSNATPIRCHRDGGYVCCFCTHQYQKPNDLKNHTLFSHDFKTKRTLTKGKRPSSYFVKLDISYLKCTICNSEMDSLEKLIDHLVKDHQKPMYTDIKNHILPFRFESDELKCTVCFNVYNKFKVLQEHLNIHYQNYVCEVCNAGFVSRMILHNHTRGHKTGVFTCEVCLKVYSTLRKLNYHKNLVHRHSYLVSKCGYCNQKFKSYHRKLEHLTEVHNMKPMTYTCKACNRNFNTQAALRVHRKRDHLMERKHKCTECEMDFFARAELNHHMLKHTGLREFQCDVCQKLFKRKFTLTEHMRIHENDCRFKCEQCGAAFVQKCSWKGHMRNKHGIIS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00167234;
- 90% Identity
- iTF_00167234;
- 80% Identity
- iTF_00167234;