Basic Information

Insect: Aromia moschata
Gene Symbol: -
Assembly: GCA_029963805.1
Location: JAPWTK010000008.1:1692891-1710815[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0042 0.32 12.3 2.8 1 23 154 177 154 177 0.96

2 11 0.00092 0.071 14.4 2.5 1 23 184 207 184 207 0.94

3 11 0.15 11 7.4 5.3 1 23 215 238 215 238 0.95

4 11 0.00046 0.035 15.3 0.5 2 23 244 266 243 266 0.96

5 11 7.9e-05 0.006 17.7 0.2 2 23 274 295 273 295 0.97

6 11 0.002 0.16 13.3 1.6 1 23 303 326 303 326 0.97

7 11 0.0011 0.081 14.2 0.2 1 23 335 358 335 358 0.97

8 11 0.011 0.85 11.0 0.8 1 23 388 411 388 411 0.97

9 11 0.017 1.3 10.4 1.9 1 23 420 442 420 442 0.97

10 11 0.037 2.8 9.3 5.2 1 23 451 473 451 473 0.97

11 11 0.0036 0.27 12.5 1.9 1 23 482 504 482 504 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0042	0.32	12.3	2.8	1	23	154	177	154	177	0.96
2	11	0.00092	0.071	14.4	2.5	1	23	184	207	184	207	0.94
3	11	0.15	11	7.4	5.3	1	23	215	238	215	238	0.95
4	11	0.00046	0.035	15.3	0.5	2	23	244	266	243	266	0.96
5	11	7.9e-05	0.006	17.7	0.2	2	23	274	295	273	295	0.97
6	11	0.002	0.16	13.3	1.6	1	23	303	326	303	326	0.97
7	11	0.0011	0.081	14.2	0.2	1	23	335	358	335	358	0.97
8	11	0.011	0.85	11.0	0.8	1	23	388	411	388	411	0.97
9	11	0.017	1.3	10.4	1.9	1	23	420	442	420	442	0.97
10	11	0.037	2.8	9.3	5.2	1	23	451	473	451	473	0.97
11	11	0.0036	0.27	12.5	1.9	1	23	482	504	482	504	0.95

Sequence Information

Coding Sequence: ATGCAAAGCGGAGACCGAGAAACGAATCGAATTACCCGCACACGTATCCATGGGACGGCGGGCCCAGATCGCGTCGCCTACTTGTATAAATTATCGTCGGTGACCCAGAGAGAGCGGCGACGGTCGCGGTTTCTTCGCACGCCAGATTTAAGAGCGACTTCCTCGGCTTACCCGGCGACCACTGACTTACTGACTGAACCGGCCGCGCGACACAGTCAAGTGTGCCGTGCCGCTGCGGGTAGGTACTACAGGTGGAACGAGGTGGCCGAGAAACTGCGGCGGCCGGCCACGATGTTTATGCGGATCGGGCATCGGCGGGATTTGTTTATGCGAAATATAAACAATGGTCGAATTTATGGGCCTCCGGGAGTCGGGAGCGCGGCGACGGGACGCGCCGGGTGGACGTCTAACAGAAATACTCTGTACAGTCATGTTAGGACTAAGCACAGCACGAAGACGTTTCCATGCACGTACTGCGAGTTCGAGACAAAATTCCAGCAAAACCTTAAAACACACACCAGGCTGAAGCATTCGCCCACAGAAAAGAACTTCAAGTGCAACGATTGCGATTACTCGACCAAACTGAAGCAGACCttgaaacaacatattttcttaCGCCACAGGCCGCAAAAAGGGGCACTCTTTAAATGCGAATTCTGTCAGTATAATACTCGACACGAGAAGTATTTACGGGACCACACGAAGTTCGTACACACCGGGAAGAGAATAAAGTGCCCCGAATGCGACTTTACCAGCACCCGCAAAGACAGCATTAACAATCACGTCAGGTACCTGCATCCCAAGGAGGTAGAGAAGTGGGAGTGTCCTGATTGTCCTTATGTAACTATGAGACAGGATATGTTCAAAATGCACATGAGGAATCACAAGAGGGTTAATCAACCCACCTACCAATGCAAAGATTGTTCCTACAAAAGCCGAACCAAGACTGCTATAACCAGGCATGCTCTTACACAACATAGCACTTCGGAAAAAATGAAGACCTTTCAATGCGATCAGTGCCCTTACGTGGGCAAATTGAAAATCTACTTGACCAGGCATATAAAAATTGCCCACTCTTTTCGCGAGGAGGACATGCTTGAGTGTGCTATTTGTCACTTGAAGACGAAGCTCACGCACAAACCCCCCGACCAAGTGGACACCTTCAAATGCGACGTGTGCCCCTTCCGAGCCAGACAGAAGATTAACGTTACCACCCACAAGCGGAACGTCCACGGCATGGGAGGCAACACGATCTGGCACCGTTGCGACTCGTGCGACTACAAGGGCAAGTCCAGGGCTTCGTTGCAGACGCACGCGCTCAAACACATGGCCAAGGATGAGGTGGAGACTTTCAAATGCCACACGTGCGGTTTTGAGGCTAAACACAAGTCGACGATAAAGAAGCACGTGCTGCAGCACATGGAACGGGGCAGGTGCGAAATGTTCAGGTGCAACGTCTGCGATTTCGCGACCAAGTACAAGGGGTATCTCAAGACGCACGTAACGTTTCATTGA
Protein Sequence: MQSGDRETNRITRTRIHGTAGPDRVAYLYKLSSVTQRERRRSRFLRTPDLRATSSAYPATTDLLTEPAARHSQVCRAAAGRYYRWNEVAEKLRRPATMFMRIGHRRDLFMRNINNGRIYGPPGVGSAATGRAGWTSNRNTLYSHVRTKHSTKTFPCTYCEFETKFQQNLKTHTRLKHSPTEKNFKCNDCDYSTKLKQTLKQHIFLRHRPQKGALFKCEFCQYNTRHEKYLRDHTKFVHTGKRIKCPECDFTSTRKDSINNHVRYLHPKEVEKWECPDCPYVTMRQDMFKMHMRNHKRVNQPTYQCKDCSYKSRTKTAITRHALTQHSTSEKMKTFQCDQCPYVGKLKIYLTRHIKIAHSFREEDMLECAICHLKTKLTHKPPDQVDTFKCDVCPFRARQKINVTTHKRNVHGMGGNTIWHRCDSCDYKGKSRASLQTHALKHMAKDEVETFKCHTCGFEAKHKSTIKKHVLQHMERGRCEMFRCNVCDFATKYKGYLKTHVTFH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -