Basic Information

Insect: Aromia moschata
Gene Symbol: -
Assembly: GCA_029963805.1
Location: JAPWTK010000135.1:221654-280206[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.062 4.8 8.6 1.5 1 23 123 145 123 145 0.98

2 17 0.0017 0.13 13.6 2.8 1 23 154 176 154 176 0.98

3 17 0.0082 0.63 11.4 1.5 1 23 185 207 185 207 0.98

4 17 0.054 4.1 8.8 5.7 1 23 234 256 234 256 0.98

5 17 7e-05 0.0054 17.9 0.3 1 23 265 287 265 287 0.98

6 17 0.00078 0.06 14.6 2.5 1 23 296 318 296 318 0.97

7 17 0.18 14 7.2 3.1 1 23 709 731 709 731 0.98

8 17 5.7e-05 0.0044 18.2 3.8 1 23 750 772 750 772 0.98

9 17 0.00074 0.057 14.7 3.8 1 23 781 803 781 803 0.98

10 17 0.84 64 5.1 2.3 1 23 831 853 831 853 0.96

11 17 0.19 15 7.1 3.7 1 23 877 899 877 899 0.97

12 17 0.00013 0.0096 17.1 2.0 1 23 908 930 908 930 0.98

13 17 0.02 1.5 10.2 5.0 1 23 939 961 939 961 0.98

14 17 0.038 2.9 9.3 3.5 1 23 970 992 970 992 0.97

15 17 0.0046 0.35 12.2 0.7 1 23 1314 1336 1314 1336 0.98

16 17 0.00064 0.049 14.9 0.8 1 23 1345 1367 1345 1367 0.98

17 17 0.00089 0.068 14.4 4.0 1 23 1376 1398 1376 1398 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.062	4.8	8.6	1.5	1	23	123	145	123	145	0.98
2	17	0.0017	0.13	13.6	2.8	1	23	154	176	154	176	0.98
3	17	0.0082	0.63	11.4	1.5	1	23	185	207	185	207	0.98
4	17	0.054	4.1	8.8	5.7	1	23	234	256	234	256	0.98
5	17	7e-05	0.0054	17.9	0.3	1	23	265	287	265	287	0.98
6	17	0.00078	0.06	14.6	2.5	1	23	296	318	296	318	0.97
7	17	0.18	14	7.2	3.1	1	23	709	731	709	731	0.98
8	17	5.7e-05	0.0044	18.2	3.8	1	23	750	772	750	772	0.98
9	17	0.00074	0.057	14.7	3.8	1	23	781	803	781	803	0.98
10	17	0.84	64	5.1	2.3	1	23	831	853	831	853	0.96
11	17	0.19	15	7.1	3.7	1	23	877	899	877	899	0.97
12	17	0.00013	0.0096	17.1	2.0	1	23	908	930	908	930	0.98
13	17	0.02	1.5	10.2	5.0	1	23	939	961	939	961	0.98
14	17	0.038	2.9	9.3	3.5	1	23	970	992	970	992	0.97
15	17	0.0046	0.35	12.2	0.7	1	23	1314	1336	1314	1336	0.98
16	17	0.00064	0.049	14.9	0.8	1	23	1345	1367	1345	1367	0.98
17	17	0.00089	0.068	14.4	4.0	1	23	1376	1398	1376	1398	0.98

Sequence Information

Coding Sequence: ATGGTCGATGTCCACGAACCTCTGTTTGCAGGATCTGCGTATCACTCGGAACCCTTCATGTGCTTCAGGTCCCTCCAAACGGTCTTCGATTTCAAGCAAAAGCGGGGCAGGTTGGACTTGAGGgagatttatttaaaagttaacgACAACGAAGACGTTGAGAGTGTTGAAGGGCGTGAGGTGTGCAGATTTTGTATGAAGCCGAGCGACAGCGGCCTCTGGACCCCCATAGACGTGATCGAGGAGAACATGGAGATAAAGAAATGGTTAGAAAACTATTTGCCTGAAATGAACACTcctgaaataaaaatggaatATGTCGAAGATCCTCAGACCAAGTCAGTTGAAGATTCAGAAGAAATGTTTTATCATTGCAATCTTTGTCCATATAAGGCCAGACTCGAAAAATATTTGACCCAGCACATGTTggttcataaggatatttccgaggtaacaaCTTATCACTGCCTGCTGTGTCCTTATAAGACGAAGCGGAAGCATGATCTGATCGCACATATGCTCATTCACAAAGATCCTTCTGAGGTGACGACTTACGACTGCAACTTCTGTTCGTTTAAGGCGAAACGCAAACGGGGCTTGACCGTACACATGCTGACTCACAAGGATAATCCCAAGAATGCTTCTGGAATAGAAACGAGTCTTCCGGccgagttgattgaagatgtaGAAGAAACAATTTATTGTTGCAAACTTTGTCCATATAAGGCCAAATTCAATCATTATTTGACCAAACACATGTTGGTTCATAAGGATATATCCGAGGCAACACGTTATCAGTGCCTACTGTGTCCTTATAAGACGAAGCGGAAGGGTGACCTGACCGCACACATGCTGATCCACAAAGATTTATCCGAGGTAACGACCTACGACTGCAACTTCTGTTCGTATAAGACAAAACGCAAAAGGAACTTGAACctacacatgctgattcataagGATCTGCGTATCACTCCGGAATCCGTCATGTGCTACGAGTGTGCCGAGACCCTCCAAACGGGCTTCGATTTCAAGTCGGCCTGCATGTACACGGAAGACTGTCTGTATCCGTTCATTGAAGGCAAAAGTGAGCCCAGGTTGGACTTGTGGgaggtttatttaaaaattaacgaCAGCAAAGACGTTGAAAGTGTTAAAGGGCGTGAGGTGTGCAGATTTTGTATGAAGCCGAGCGACAGCGATTGCTGCACCCCCGTAGACGTGATCGAGGAGAACGTGGAGATAAAGAAATTGTTAGAAAACTATTTGCCTGAAGTGGTTATGGGGGTGATTGAAAAACCTGTGGCATGCAAGAACTGCTGTAACTTCCTCCATCAATATTCATTGTTTGTCACAAGTTTTTTACATGTCGAACAACAAATTCAGTCGTATTTTAAAACCTTGGGAAGGGACTACTTCGGTGAGATAGACTTAAGGCAAGTGAGAGATTTTTCACTAAGCAGTGTGACAAAACGTGAGGCGGAAACTAATGGTAAAGATAAGGTTGCAAAAGAAGTAGTTATGATTTTTAGTGAAATTGAGAACGAAGAAAAAATTGTGCCAGAAGAGGACATGGAGTGTGCGGAAAAAGAAACTGGCGAAAGTAAAATTAGCATGGCGTCACCTGATTTCTATGGTTTCGCAGAAAGTGATGAACTTTTTACGTGGAATGAGATACCGGTTATTGAAGATGCACAAGTAGACGTTGAAATGAAGCGTCCATTTTTGGAACCACTTGGAACTGAAGTAACAGAGAAATATCTTGAGGAGGATGTTATACATACTGAGGAAACCAAGGGAGAAAGTTTGAAAAGCCAAAGAGTGCCATCTCCACAGAAAATCGAGGAATGTCAGGAGCTCGAGGCGAGTTTAGGCATCaagttggtggaatttgaaattaaaaaggagGATGATGAATGTGACGGgaatgaAAATAGTACTTTATCGCTAATCGATCCCAGTATGATATTTTCTGGAGATGCTGATATAAAACCCACTGTAGCAGATACATCTTATAACCCTGAGGCAAACCATACGGCCATCGAAAGTGGCCCTGACCAGGAGCTTTCTGAATTAGAAACGAATCTTCAGGTCAAAAGTCAGGTTGGAGTCGTTGAAGAGGCAATTTATCGTTGCAAACTTTGTCCATATGAGACCAAATTCAAAGAATGTTTGGACGAACACACGCTGACTCATGAGGATAATTCCAAGAACGCTCATGGAACAGAAACGGAAAAAGAAACAATAATTCATCGGTGCAAACTGTGTCCTTATAAGACGAAGCGGAAGAGTGATCTGACCAAACACATGCTCATTCACAAAGATCCTTCCGAGATAACGACTTACGACTGTAAATTCTGTTCATATAAGACAAAACAGAAAGGCAACTTGAAGAGGCACACGCTGACTCACAAGGATAATCCCAAGGATGCTTCTGAATTAGAAACGAATCTTCAGGTCAAAAGTCAGGTTGAAGTCGTAGGAGAGGCAATTTATCTTTGCAAACTTTGTCCGTATGAGACCAAATTCAAAGAATGTTTGGACGAACACACGCTGACTCATGAGGATAATTCCAAGAACGCTCTTGGAACAGAAACGGAAAAGTTAGTTGAAGGCGTAAAAGAAACAATTCATTCTTGCAAACTTTGTCACTATAAGACCAAGTGGAAGGGTGATCTGGTCAAACACATGTTGGTTCACAAAGATTCTTCAGAGGTAAGGCCTTACGACTGCAACAGATGTTCGTATAAGGCAAAACGCAAAGGCGACTTGAACAAACACATGCGGACTCACAAGGATAAGCCCAAGgtaaagAGTTACCACTGCCTACTGTGTCCTTATAAGTCGAAACGGAAGTGTGATCTGGCCAAACATATGATGAGTCACAGGGATCCTTCCGAGAGACCAACTTACCACTGCTACTTCTGTTCGTATAAGGCAAAACGCAAAAGCTTGCTGATCAAACACTTGCTGATTCACAAGGATAATCCCAAGGATGCTAAATCCACACTAACCCAACAAAGGAGTATGTCGGGAAAATATGAACTCGAGGAATGTTCGACCATTAAGTCGGAGGAAGTTGATATTAAAGATGAGGGAAGACGAATAATCTTCATATCACTCGGAACCAGTCATGTGCTACGAGTGTGCGAGACCCTTCAAACGGCTTTCGATATCAAGTCGGCCTGCATCTACACGAAAGACTGTCTGTATCCATTCATTGAAGGCAAAAGTGAAGCCAGATTGGACTTGCAGGAGATTTATTTGAACATTAATGACCAGGAAGACATTGAGAGTGTTAAAGGGCACGTGATCGAGGAGAACGTGGAGATAAAGAAATtgttagaaaattattttcctGAAGTGGTTATGGGGGTGATTGAAAAACCTGTGGCATGCGAGAACTGCTACAATATCCTCCATCAGTATTCATTGTTTGTCGCAAGCTTTTTATATGTCGAACAACAAATTCAGTTCTATGCTAAAAAAACCTTGGGAAGGGACTGCGTCGGTGAGATAGATTTAAGGCAAATGAGAGATTTTTCGCTGAGCAACGTGACAAAACGTGAGGTGGAAATTATCGGTAATGACAAGGTAATAAAAGAAGAAGTTATGATTTTTAGTGAAATTGAGAGCAAAGAAAAAATTATGCCAGAAGAGAAAATCAAATGTGAGGAAAAAGAAAATGGTGAAAGGAAAATTAGTATGGCGTTGCTTGAGACTGAAAGACAAGGACAAGAAGAGTTGAATAGTTTCGCGGGAAGTGATGAACTTTTTAGGTCGAATCAGATACCGGTTATTGAGGATGCACAAGTAGATGTTGAAATGAAGATTTCAGTTTTGGAACCACTTGAAACTGAAGTAATAGGGAAATATCTTGAGGAGGATACTGAGAAAGTGAAGGGGAAAGTCGAACCAGTCGAAGATTTGGAAGAAAGAATGTATCGTTGCAAACTATGTCCATATAAGgccaaattaaagaaaaatttgacTGGACACATGTTGGTTCATAAGGATACTTCCGAGGTGACAAGTTATCAGTGTCTACTGTGTCCGTATAAGACGAAGCGGAATACTGATCTGACCAAACACGTGTTGATTCACAAAGATTCCtctgaggtaacgacttacGACTGCAACTTCTGTTCGTATAAGACAAAACGCAGACAGAGCTTGAGGAAACACATGCTGACTCATCAGGATAAACCCAAGGATGCTAAATCCACACTAACCCAACAAGAGAGTATGTCGGAACAGCAAGAATTCGAGGGATGTTCAACCATTAAGTCGGAGGAAGTCGATATTAAAGATGAGGAAGATGAATGTGACGATGAATATAATAAACTTTAA
Protein Sequence: MVDVHEPLFAGSAYHSEPFMCFRSLQTVFDFKQKRGRLDLREIYLKVNDNEDVESVEGREVCRFCMKPSDSGLWTPIDVIEENMEIKKWLENYLPEMNTPEIKMEYVEDPQTKSVEDSEEMFYHCNLCPYKARLEKYLTQHMLVHKDISEVTTYHCLLCPYKTKRKHDLIAHMLIHKDPSEVTTYDCNFCSFKAKRKRGLTVHMLTHKDNPKNASGIETSLPAELIEDVEETIYCCKLCPYKAKFNHYLTKHMLVHKDISEATRYQCLLCPYKTKRKGDLTAHMLIHKDLSEVTTYDCNFCSYKTKRKRNLNLHMLIHKDLRITPESVMCYECAETLQTGFDFKSACMYTEDCLYPFIEGKSEPRLDLWEVYLKINDSKDVESVKGREVCRFCMKPSDSDCCTPVDVIEENVEIKKLLENYLPEVVMGVIEKPVACKNCCNFLHQYSLFVTSFLHVEQQIQSYFKTLGRDYFGEIDLRQVRDFSLSSVTKREAETNGKDKVAKEVVMIFSEIENEEKIVPEEDMECAEKETGESKISMASPDFYGFAESDELFTWNEIPVIEDAQVDVEMKRPFLEPLGTEVTEKYLEEDVIHTEETKGESLKSQRVPSPQKIEECQELEASLGIKLVEFEIKKEDDECDGNENSTLSLIDPSMIFSGDADIKPTVADTSYNPEANHTAIESGPDQELSELETNLQVKSQVGVVEEAIYRCKLCPYETKFKECLDEHTLTHEDNSKNAHGTETEKETIIHRCKLCPYKTKRKSDLTKHMLIHKDPSEITTYDCKFCSYKTKQKGNLKRHTLTHKDNPKDASELETNLQVKSQVEVVGEAIYLCKLCPYETKFKECLDEHTLTHEDNSKNALGTETEKLVEGVKETIHSCKLCHYKTKWKGDLVKHMLVHKDSSEVRPYDCNRCSYKAKRKGDLNKHMRTHKDKPKVKSYHCLLCPYKSKRKCDLAKHMMSHRDPSERPTYHCYFCSYKAKRKSLLIKHLLIHKDNPKDAKSTLTQQRSMSGKYELEECSTIKSEEVDIKDEGRRIIFISLGTSHVLRVCETLQTAFDIKSACIYTKDCLYPFIEGKSEARLDLQEIYLNINDQEDIESVKGHVIEENVEIKKLLENYFPEVVMGVIEKPVACENCYNILHQYSLFVASFLYVEQQIQFYAKKTLGRDCVGEIDLRQMRDFSLSNVTKREVEIIGNDKVIKEEVMIFSEIESKEKIMPEEKIKCEEKENGERKISMALLETERQGQEELNSFAGSDELFRSNQIPVIEDAQVDVEMKISVLEPLETEVIGKYLEEDTEKVKGKVEPVEDLEERMYRCKLCPYKAKLKKNLTGHMLVHKDTSEVTSYQCLLCPYKTKRNTDLTKHVLIHKDSSEVTTYDCNFCSYKTKRRQSLRKHMLTHQDKPKDAKSTLTQQESMSEQQEFEGCSTIKSEEVDIKDEEDECDDEYNKL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -