Basic Information

Insect: Aromia moschata
Gene Symbol: -
Assembly: GCA_029963805.1
Location: JAPWTK010000275.1:207024-218646[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.91 70 5.0 0.2 2 23 104 125 103 125 0.94

2 15 0.24 18 6.8 3.0 1 23 131 153 131 153 0.97

3 15 0.0034 0.26 12.6 2.3 1 23 159 181 159 181 0.91

4 15 0.00016 0.012 16.8 3.5 1 23 204 227 204 227 0.94

5 15 0.012 0.92 10.9 0.9 3 23 238 258 237 258 0.98

6 15 5.4e-06 0.00041 21.4 2.2 1 23 264 286 264 286 0.97

7 15 8.9e-07 6.8e-05 23.9 0.7 1 23 292 314 292 314 0.98

8 15 0.00058 0.044 15.0 0.1 1 21 320 340 320 341 0.96

9 15 0.31 24 6.4 1.2 2 20 385 403 384 406 0.91

10 15 0.35 27 6.3 4.6 1 23 441 463 441 463 0.89

11 15 0.00017 0.013 16.7 3.5 1 23 469 492 469 492 0.97

12 15 5.7e-05 0.0044 18.2 2.0 1 23 504 527 504 527 0.96

13 15 0.0018 0.14 13.4 1.3 3 23 536 556 535 556 0.99

14 15 2e-05 0.0016 19.6 4.8 1 23 562 584 562 584 0.97

15 15 8.7e-06 0.00067 20.8 1.4 1 23 590 612 590 612 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.91	70	5.0	0.2	2	23	104	125	103	125	0.94
2	15	0.24	18	6.8	3.0	1	23	131	153	131	153	0.97
3	15	0.0034	0.26	12.6	2.3	1	23	159	181	159	181	0.91
4	15	0.00016	0.012	16.8	3.5	1	23	204	227	204	227	0.94
5	15	0.012	0.92	10.9	0.9	3	23	238	258	237	258	0.98
6	15	5.4e-06	0.00041	21.4	2.2	1	23	264	286	264	286	0.97
7	15	8.9e-07	6.8e-05	23.9	0.7	1	23	292	314	292	314	0.98
8	15	0.00058	0.044	15.0	0.1	1	21	320	340	320	341	0.96
9	15	0.31	24	6.4	1.2	2	20	385	403	384	406	0.91
10	15	0.35	27	6.3	4.6	1	23	441	463	441	463	0.89
11	15	0.00017	0.013	16.7	3.5	1	23	469	492	469	492	0.97
12	15	5.7e-05	0.0044	18.2	2.0	1	23	504	527	504	527	0.96
13	15	0.0018	0.14	13.4	1.3	3	23	536	556	535	556	0.99
14	15	2e-05	0.0016	19.6	4.8	1	23	562	584	562	584	0.97
15	15	8.7e-06	0.00067	20.8	1.4	1	23	590	612	590	612	0.98

Sequence Information

Coding Sequence: ATGAACTCTCCACTGAGCCAACGCCTGCAggataggccacccaaacagaTCCTGTTTCCTCTAATTTTATTAGTCAACATTAAGATCGATAGAATCGCCCAACAGATGTCCGATCGTGCAAAATCCAGCGTAACTGTAGAGAGgTACGAAAAACAAGAAACAGACGACGATGTAAACTACGAAGAAGTAACAAAGGTTAAGAAAGAGCGCAAGCAGCGTAAAATTAAAGATAAGAAAGACAGGAAACAAAGACGCAAGAAAAAGATCGACGTCGTCCATCCCCCTCCCATCGAGCTGGACGAGCCTATTCAGTGCGACGTCTGCAGCGACACCTACAAGAACAACGTCGCGTTCTCCCTGCATTCCATCAGCCACAGCGAGGACGGCAAATATTCCTGCCACATATGCAACTACAGAAACGCCTCCAAGTACCACATAGAGATGCACGTCAGAGCTCACGAGGGCACCACCAGCTACAAGTGCGAGATCTGCAACAAGGCCTTCACGGTCAGCACCCACGCCATGGAGCACAAGTACTTCCACTCGGGAGAGAAGCCCTTCCAGCGCACCCAGCACTGGGAGATCATCACGGGCACGCCGCTGATCAAGTACGACTGCACCATCTGCAAGAAGCACTACACCTCCTCCAGTGGGTTGAAGAGACACAACCTGCGGAACCACAACACCGAGGGCATCGACACCTCCGTGCTGTGCGACATCTGCGGCAAGAAGATCTCGAGTAACGAGAAGCTGAAGTTCCATCGCAGGGTGCACACCGGATACAAGCCGTTCGCCTGCGAGGTCTGCGGAAAATGTTTTTCCACGAAGGAGCAGAAGAAGGAGCACCTGAGGGTGCACACGGGGGAGAAACCGTACATCTGCAAGTACTGCGGCAAGGGGTTCACCCAGAGGTCGCCCCTGAAGATACACGAGAGATCCCACACTGGTGAAATGCCTTACGTGTGCCTGATCTGTACGAAGGGATTTATCTCCAAGAGTGCCATGGATACCCACATGAGGAATTGCAATAATCAGGAAAAAAGAGTAACAAGGCAACGTCGAGTTAGAAACTCGCGAAAGAACAAACTAAAAGCCTCGAAGGGTAAAAAGAACGAGGAGCACCCGCCTCCTTTAAAACTTGACCAGCCCATACAGTGCGACGATTGCGAAGAGTACTTCAACAACAACATCGATTTCGCTCTACACTCGAAATGCCACGACAAGGACGGAAAATACACCTGCCACTTGTGCATTAATTTTCGAAACGCCTCTAAGTACCAGATAGAGATGCACATCAGGGCGCACGAGGGGACGACCAAATACAAATGCGAGATCTGCAGTCAGTGCTTCACGATCAGCACGCACGCTATCGAGCACAAGTACTTCCACACCGGCGAGAAGCCCTTCCAGTGCGAGATCTGCGGAAAGCACTTCATGTACTCCTGGTTCCTGTCCAGGCACCGGAAGTCTTCGCACTACGAAATCCTGACGGGCAGCCCTCTGGTAAAGTACGACTGTCCGCTGTGCAACAAGCACTACGCCACCGCCTCCAGTCTGAGCAGGCACAAGCAGAGCAAACACAAGAAAATCGACGGTTCGGTGCTGTGCGACATCTGCGGTAAGAGGCTGTCCAGCAGGGAGAAACTGAAGTTCCACCTTAGGACGCACACCGGCTTCAAACCGCACCACTGCCACGTGTGTCCCAAGAGTTTTTCGAAGAAGGACCAGCTGGTGGAGCACGTGAGGGTGCACACGGGAGAGAAGCCGTACATTTGCAAGTACTGCGGACGCGGCTTCACCCAAAGAACACCGCTGAAGACGCACGAGAAGACGCACATTCGCGAAGAGATAAGCGCTGGTTGCGCGGTATGCGGACAAACCGGAAGCTGCGGTCACATCCAGCATTACCAATTGCCATCGCCGTTTACTTACGCATGA
Protein Sequence: MNSPLSQRLQDRPPKQILFPLILLVNIKIDRIAQQMSDRAKSSVTVERYEKQETDDDVNYEEVTKVKKERKQRKIKDKKDRKQRRKKKIDVVHPPPIELDEPIQCDVCSDTYKNNVAFSLHSISHSEDGKYSCHICNYRNASKYHIEMHVRAHEGTTSYKCEICNKAFTVSTHAMEHKYFHSGEKPFQRTQHWEIITGTPLIKYDCTICKKHYTSSSGLKRHNLRNHNTEGIDTSVLCDICGKKISSNEKLKFHRRVHTGYKPFACEVCGKCFSTKEQKKEHLRVHTGEKPYICKYCGKGFTQRSPLKIHERSHTGEMPYVCLICTKGFISKSAMDTHMRNCNNQEKRVTRQRRVRNSRKNKLKASKGKKNEEHPPPLKLDQPIQCDDCEEYFNNNIDFALHSKCHDKDGKYTCHLCINFRNASKYQIEMHIRAHEGTTKYKCEICSQCFTISTHAIEHKYFHTGEKPFQCEICGKHFMYSWFLSRHRKSSHYEILTGSPLVKYDCPLCNKHYATASSLSRHKQSKHKKIDGSVLCDICGKRLSSREKLKFHLRTHTGFKPHHCHVCPKSFSKKDQLVEHVRVHTGEKPYICKYCGRGFTQRTPLKTHEKTHIREEISAGCAVCGQTGSCGHIQHYQLPSPFTYA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00792433;
90% Identity: -
80% Identity: -