Basic Information

Insect: Aromia moschata
Gene Symbol: -
Assembly: GCA_029963805.1
Location: JAPWTK010000275.1:261535-278224[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.85 65 5.1 0.1 1 23 181 203 181 203 0.95

2 18 5.7 4.4e+02 2.5 2.1 1 23 209 231 209 231 0.91

3 18 0.36 28 6.2 0.2 1 23 238 260 238 260 0.93

4 18 0.23 18 6.8 1.9 1 23 266 289 266 289 0.97

5 18 0.0066 0.51 11.7 0.6 2 23 515 536 514 536 0.94

6 18 1.6 1.2e+02 4.2 5.7 1 23 542 564 542 564 0.97

7 18 0.0062 0.47 11.8 0.6 1 19 569 587 569 591 0.79

8 18 0.00032 0.024 15.8 5.1 1 21 597 617 597 620 0.95

9 18 0.0085 0.65 11.4 6.1 1 23 631 654 631 654 0.95

10 18 0.3 23 6.5 0.3 3 16 663 676 662 691 0.68

11 18 0.0067 0.52 11.7 0.6 2 23 835 856 834 856 0.93

12 18 0.0032 0.25 12.7 0.9 1 23 890 912 890 912 0.90

13 18 0.00017 0.013 16.7 2.7 1 23 918 941 918 941 0.97

14 18 0.0041 0.32 12.3 5.2 1 23 952 975 952 975 0.96

15 18 0.018 1.4 10.3 0.3 3 23 984 1004 982 1004 0.96

16 18 1.8e-06 0.00014 22.9 1.3 1 23 1010 1032 1010 1032 0.99

17 18 3.2e-07 2.4e-05 25.3 1.9 1 23 1038 1060 1038 1060 0.99

18 18 0.0039 0.3 12.4 0.0 1 22 1066 1087 1066 1087 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.85	65	5.1	0.1	1	23	181	203	181	203	0.95
2	18	5.7	4.4e+02	2.5	2.1	1	23	209	231	209	231	0.91
3	18	0.36	28	6.2	0.2	1	23	238	260	238	260	0.93
4	18	0.23	18	6.8	1.9	1	23	266	289	266	289	0.97
5	18	0.0066	0.51	11.7	0.6	2	23	515	536	514	536	0.94
6	18	1.6	1.2e+02	4.2	5.7	1	23	542	564	542	564	0.97
7	18	0.0062	0.47	11.8	0.6	1	19	569	587	569	591	0.79
8	18	0.00032	0.024	15.8	5.1	1	21	597	617	597	620	0.95
9	18	0.0085	0.65	11.4	6.1	1	23	631	654	631	654	0.95
10	18	0.3	23	6.5	0.3	3	16	663	676	662	691	0.68
11	18	0.0067	0.52	11.7	0.6	2	23	835	856	834	856	0.93
12	18	0.0032	0.25	12.7	0.9	1	23	890	912	890	912	0.90
13	18	0.00017	0.013	16.7	2.7	1	23	918	941	918	941	0.97
14	18	0.0041	0.32	12.3	5.2	1	23	952	975	952	975	0.96
15	18	0.018	1.4	10.3	0.3	3	23	984	1004	982	1004	0.96
16	18	1.8e-06	0.00014	22.9	1.3	1	23	1010	1032	1010	1032	0.99
17	18	3.2e-07	2.4e-05	25.3	1.9	1	23	1038	1060	1038	1060	0.99
18	18	0.0039	0.3	12.4	0.0	1	22	1066	1087	1066	1087	0.96

Sequence Information

Coding Sequence: ATGAGTGGGAAGTACAAGCCTTTGACTCAGAAAGAATTAGAAGAAATAGCGGATAACATAGATTTAAGCGATTCAGAAATCGAATATGACTCCGACTCCAGTTCAACGGATAATGAAGAACGACATGATCTGTGCACTGAATACGTTTCTGAAGAGGAAGACAATTCAGAAATACAGGTGCACGAGAACTCTGATAAAGAACCTTCAGACATCGATGCAAATTTTGAAGAATTAAGCTCACCGGCTTACACCTCAAAGTCTGGTTTGCAATGGAATAGTAGACCGTTTCCAAAAAGTAAACGACTGAAGAGAAATATTGTGAGAGCAAAACCAGGGATTACTGATTACAGTCGACAAGCAAAATCAATCCAAGataatttcaatatatttatcACCGGTGCAATGAAAGAACAAATATGCCAGTATACCAACGAGGAAGCTTGCAGgttaaataaacgaaaaatgaGACGGATAAAGAAAGAACAAACCGAAAACGTGATAGTCAAAGAAGAACCGTTGATCGACGAGGATTCGATCAAGTTCGCGTGCGAATTGTGCGATGAGAAAATCAACTCAAGCATCGACTTTGCCGTCCACTCCATTAAGCACTCGAACGACAATAAGTATCACTGTCCCTACTGCAACTCCAAAAGTGTGTTAATAAATAGGATAAGGACTCACATGAGGAGTCACGGCAACATGGGAAAGTTTTACCAATGCCAGATTTGCTTCAAACTCTTTCCCGAGGCCATACAGATGGCAGAACACGAAAATTTCCATTCGGGCGAGATGGCTTACAAATGCGAGCCTTGCGAGAAATACTTTATGTTCTCCTGGCTCTTGTTCACGCATCGTCGCTTGTTCCACTGGAATGATTTTCataactgGTATTTCAGTCCGATAGTCCTTAACACTATAACATACGTTCCAGGAATATTAATTACTCCCATCAGACAGGAAACATATAACTGCAATTACAATGCAATCGCTCCGACCAACTTCAATCACTTCAACGGTTACAACCAACTCATCTCCACCTGTCACTTAGGACAAGTGGCGATGAAAAACGCAATACCTCATTCTCCTGACTTGCAAAACGCGTATCCAGAACCAGAGGGAGAGTTGTTATCAAAGGAAAACATATTAGACTGCTTACCCAAGAAGTCCAGTAAGATAGAGTCGGAGGAGCCCACTCCAACAACAGGACTAGGAAGCGAGTCGATAGAGAAGGAAAACATATCAGACTGTTTAGCCAAGAAGTCCATTAAGATAAAGTCGGAGGAGCCCACTCTAGCAACAGAACTAGGAGACCAGTCGGTATCAAAGGAAAACATATTAGACTGCTTACCCAAGAAGTCCAGTAAGATAGAGTCGAAGGAGCCCACTCCAGCAACAGAACTAGGAGGCCAGTCGATATCAAAGGAAAACATATTAGACTGCTTACCCAAGAAGTCCAGTAAGATAGAGTCGGAAGAGCCCACTCCAACAATTACTGCCGAAAACAACAGCCAACAGGCGTCCGTCGAACTAAAAGAGCCGATACACTGCAAAATCTGTAACGAAACTTACAAGAATAATGTCGCGTTGGCACTACATTCGGCGAAACACAACGAGGACGGAAAGTACACTTGCCACTTTTGCAACTACAAAAAAGCCTCCAAGTACCATATCAAGAGGCATATCGGGATCCACGAAAAACTGAAATACAAATGCGAGATCTGCGGCAAAGTATTCAGGGTAGAATCTCGCGCCGTCGAGCATAAGTACTTTCACACCGGCGAGAAATCTTTCCAGTGCGAGATTTGCGGAAAATTCTTCAGGTACTCCTCGTTCTTGTCCAAGCATCTAAAGTGCACGCATAGCGAAATCCTGACGGGCAGCCCTCTAAGATTCAACTGCAAATTGTGCAACAAACACTACGCCACCTCCTCCGGTTTGAGTAGGCACAAGCACAAAAGCCACGAGAAAATCGACGATTCGGTCCTGTGCGACATCTGCGGCAAGAGGCTCACCAACAGGGATGGACTGAACTTCTCCAAGAAGGAGCAGCTCGTAGAGCACGAGCGCGTCCACACCGGGGGAGAGGCCGTTCAAATGCAAGTACTGCGGCAAAGGCTTCACCCAGAGGTCTCCGCTGAGGTTACACGAGCGCACGCACACCGGGGAGCGGCCATATGTGTGCGTGATATGCAGCAAGGGGTTCATCTCCAAAGCCGTCAGGGATACGCATATGAAGACGTGCTCATAGCGAATGCGAAGACATACAGTACAGACACACCAACAAATTTCAACCACTTGACAGTTGGACAGGTGGAATTGAAAAGCACAGTAGCTGATTCTCCGGATACATATCCAGAACTAGAAGGCGAGTTAGTGCCAAAGGAAAACCTATTAGACTGCTTACTCACGAAGTCCAGTAAGATAAAGTTGGAGGAGCCCAGTCCAACGATTACTGCCGAAAACAACAGCCAACAGGCGCCCATCGAGCTGGACGAACCGATACACTGCGAGATCTGTAACGAAACTTTCAAGAATAATGTCGCGTTTGCGCTGCATTCGGCGAAACACAGCGAGGACGGAAAGTACGCTTGCCACTTGTGCAACTACAGAAACGTCTCTAAGTACCGCATCAAACTGCATATTGAACTCCACGAGGGCACAACGAAATTCAAATGCGAGATCTGCGGCAAAGCGTTCGCGGTAAGCACCCACGCCATCGAGCATAAGTACTTCCACACCGGCGAGAAACCCTTCCAGTGCGATATTTGCGGAAAACACTTCATGTACTCTTGGTTCTTGGCCAGGCACCGGAAGTCCTCGCACTCAGAAATTCTGACGGGCAGCCCTCTCAAATTCGAGTGCCAGCTGTGCAACAAACACTACGCCACCTCCTCCGGTTTGAGCAGGCACAAGCACAAAAACCACAAGCAAATCGACGATTCGGTCATCTGCGACATCTGCGGCAAGAGGCTCATCAGCAGGAAGGGGCTGAAGTTCCATCGGAGGGTCCACACCGGCTACAAGCCGTACACTTGCGAGGTGTGCTCCAAGAGCTTCTCCAAGAAGGAGCAGCTGACACAGCACGAGCGCGTCCACACCGGGGAGCGGCCGTTCAAATGCAAGTACTGCGGCAAGGGTTTCACACAGAGGGCTTCTCTGAGGTTACACGAGCGCACGCACACCGGGGAGCGGCCATATGTGTGCATGATATGCGGCAAGGGGTTCATCTCCAAAGGTGTCATGGACACCCATATGAAGACGTGCTCATAG
Protein Sequence: MSGKYKPLTQKELEEIADNIDLSDSEIEYDSDSSSTDNEERHDLCTEYVSEEEDNSEIQVHENSDKEPSDIDANFEELSSPAYTSKSGLQWNSRPFPKSKRLKRNIVRAKPGITDYSRQAKSIQDNFNIFITGAMKEQICQYTNEEACRLNKRKMRRIKKEQTENVIVKEEPLIDEDSIKFACELCDEKINSSIDFAVHSIKHSNDNKYHCPYCNSKSVLINRIRTHMRSHGNMGKFYQCQICFKLFPEAIQMAEHENFHSGEMAYKCEPCEKYFMFSWLLFTHRRLFHWNDFHNWYFSPIVLNTITYVPGILITPIRQETYNCNYNAIAPTNFNHFNGYNQLISTCHLGQVAMKNAIPHSPDLQNAYPEPEGELLSKENILDCLPKKSSKIESEEPTPTTGLGSESIEKENISDCLAKKSIKIKSEEPTLATELGDQSVSKENILDCLPKKSSKIESKEPTPATELGGQSISKENILDCLPKKSSKIESEEPTPTITAENNSQQASVELKEPIHCKICNETYKNNVALALHSAKHNEDGKYTCHFCNYKKASKYHIKRHIGIHEKLKYKCEICGKVFRVESRAVEHKYFHTGEKSFQCEICGKFFRYSSFLSKHLKCTHSEILTGSPLRFNCKLCNKHYATSSGLSRHKHKSHEKIDDSVLCDICGKRLTNRDGLNFSKKEQLVEHERVHTGGEAVQMQVLRQRLHPEVSAEVTRAHAHRGAAICVRDMQQGVHLQSRQGYAYEDVLIANAKTYSTDTPTNFNHLTVGQVELKSTVADSPDTYPELEGELVPKENLLDCLLTKSSKIKLEEPSPTITAENNSQQAPIELDEPIHCEICNETFKNNVAFALHSAKHSEDGKYACHLCNYRNVSKYRIKLHIELHEGTTKFKCEICGKAFAVSTHAIEHKYFHTGEKPFQCDICGKHFMYSWFLARHRKSSHSEILTGSPLKFECQLCNKHYATSSGLSRHKHKNHKQIDDSVICDICGKRLISRKGLKFHRRVHTGYKPYTCEVCSKSFSKKEQLTQHERVHTGERPFKCKYCGKGFTQRASLRLHERTHTGERPYVCMICGKGFISKGVMDTHMKTCS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -