Basic Information

Insect: Aromia moschata
Gene Symbol: -
Assembly: GCA_029963805.1
Location: JAPWTK010000020.1:184193-189941[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 22 0.54 41 5.7 0.7 8 23 79 94 78 94 0.92

2 22 0.012 0.89 10.9 4.9 1 23 103 125 103 125 0.98

3 22 0.92 71 4.9 4.2 1 23 134 156 134 156 0.93

4 22 0.0091 0.7 11.3 4.6 1 23 161 183 161 183 0.98

5 22 0.0065 0.5 11.7 4.8 1 23 192 214 192 214 0.98

6 22 0.15 11 7.5 0.7 1 23 394 416 394 416 0.97

7 22 0.053 4.1 8.8 2.6 1 23 425 447 425 447 0.99

8 22 0.00011 0.0081 17.4 1.8 1 23 456 478 456 478 0.98

9 22 0.00029 0.023 15.9 2.6 2 23 488 509 487 509 0.96

10 22 3.1 2.4e+02 3.3 3.3 1 23 518 540 518 540 0.93

11 22 0.06 4.6 8.7 3.9 1 23 545 567 545 567 0.98

12 22 0.00061 0.047 14.9 3.4 1 23 576 598 576 598 0.98

13 22 0.022 1.7 10.1 4.2 1 23 607 629 607 629 0.98

14 22 0.00054 0.041 15.1 2.6 1 20 643 662 643 662 0.98

15 22 0.0051 0.39 12.1 2.4 1 23 674 696 674 697 0.96

16 22 6.3e-05 0.0048 18.1 3.2 1 23 704 726 704 726 0.99

17 22 0.00036 0.027 15.7 1.7 1 23 735 757 735 757 0.98

18 22 0.00028 0.022 16.0 4.4 1 23 769 791 769 791 0.99

19 22 2.8e-05 0.0021 19.2 4.0 1 23 800 822 800 822 0.98

20 22 1.4e-05 0.001 20.2 3.4 1 23 831 853 831 853 0.99

21 22 0.14 11 7.5 6.6 1 23 862 884 862 884 0.99

22 22 0.031 2.4 9.6 4.8 2 23 894 915 893 916 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	22	0.54	41	5.7	0.7	8	23	79	94	78	94	0.92
2	22	0.012	0.89	10.9	4.9	1	23	103	125	103	125	0.98
3	22	0.92	71	4.9	4.2	1	23	134	156	134	156	0.93
4	22	0.0091	0.7	11.3	4.6	1	23	161	183	161	183	0.98
5	22	0.0065	0.5	11.7	4.8	1	23	192	214	192	214	0.98
6	22	0.15	11	7.5	0.7	1	23	394	416	394	416	0.97
7	22	0.053	4.1	8.8	2.6	1	23	425	447	425	447	0.99
8	22	0.00011	0.0081	17.4	1.8	1	23	456	478	456	478	0.98
9	22	0.00029	0.023	15.9	2.6	2	23	488	509	487	509	0.96
10	22	3.1	2.4e+02	3.3	3.3	1	23	518	540	518	540	0.93
11	22	0.06	4.6	8.7	3.9	1	23	545	567	545	567	0.98
12	22	0.00061	0.047	14.9	3.4	1	23	576	598	576	598	0.98
13	22	0.022	1.7	10.1	4.2	1	23	607	629	607	629	0.98
14	22	0.00054	0.041	15.1	2.6	1	20	643	662	643	662	0.98
15	22	0.0051	0.39	12.1	2.4	1	23	674	696	674	697	0.96
16	22	6.3e-05	0.0048	18.1	3.2	1	23	704	726	704	726	0.99
17	22	0.00036	0.027	15.7	1.7	1	23	735	757	735	757	0.98
18	22	0.00028	0.022	16.0	4.4	1	23	769	791	769	791	0.99
19	22	2.8e-05	0.0021	19.2	4.0	1	23	800	822	800	822	0.98
20	22	1.4e-05	0.001	20.2	3.4	1	23	831	853	831	853	0.99
21	22	0.14	11	7.5	6.6	1	23	862	884	862	884	0.99
22	22	0.031	2.4	9.6	4.8	2	23	894	915	893	916	0.94

Sequence Information

Coding Sequence: ATGGCAAATACGATTACCAAGAACCATAGTAACCTCAACCTGATTCCACATTCTAAGCTCAAACACGAACACAAGAACTTTGATGTTGATACATTTAGTGAGAATGATGATAACAAAACCAAACTGTGCGAGGAATTGTTAAGTGATGAGTCGTACAGTGCTATAAAATCGGAACGACAAGAACTTAGCATTAAATCCGAGGAGTTTGAGATCAAAATGGAGGAACACAGTTACAAGAGAACAAAGTATAAAGCAAGTCTCAGAAATCACATGATAACCCATCGAGACCCTTCCGAAGTCACAATGTACCATTGCGACAAATGCGAATACAAGACGAAACTGAAATTCAATCTTAAGCAGCATATGGTGACGCATCAGGAGACTCTTGACGTTATGATGCATCGGTGCGACAAGTGCGAGTTCAAGACGAAGCAGAAATATTTTCTGGACCGGCATAGTGTGGTCCATCGGGatatttgttttcaatgcgACAGATGCGAATTTAAAACGAAGCACAAAGGGAGTCTCAGAAATCATACGCTGACCCACCAGGACCCCTCTGAACTCACCATGTATCACTGCGACGTATGTGAATACAAGGCAAAATTGAAATACAATCTAAAGCATCATATGTTGACCCATCGGGACCCGACCGAAATTGTAAATATCACTCAAGATGATCCACCAGTTTGCGCATCGTGTAACACGTCCTTGGAGGCTTTCTTCAATATCATGAATAGCTGGTCAAGCATCCGACAAACCATAAAAAGAAATGATGCTATGCCACATACAATTACTAAGAGTCATACTAATATCAACTCAATTCCACAATTCGAGCTCAAATGTGAGAAAGATGACGAGAGCTTTGAGTTATCCAGCATGTTTTCTGTGAATGAAAATGGTTCCAAGCTCTATGACTGCACCGTAAGTGGAGAGTCTTCTAGAGTTGTGAAATCAGAAGGACAAGAATCTAACATAAAATACGAAGAGGTGGATCTAAAAATAGAACAAGACACAACCAGTTTGGAAGACTATACAGTAACTCCACATGAATTAGAAGAATTGAAAACACAGTCGAATACTACGTTCAACTATGATCACCAATTAGATCAGGTGGCACAAGGATATGTTTTTCCACGCAATTCGTCCAGACACATCCTGGATCCTTCCGAAGTAAGGTACGAATGTGACAAATGCGATTACAAGGCAAAGTATATGTCTCGTATTAAGCAACACATGGTGGTCCACCTGGATCCGTCTGAAGCCACGATGTATAAATGTTTACGATGCGACTACCAGGCGAAGCACGAGTATCGACTGAAGGAGCATATGGCAACCCACCTAGACGCATCCGAAGTCACCATCTACAAGTGCGAAAACTGCGAATATACCACAAAGTACGCACGAAATCTCAAGAGACATTTGATGCTACATCTAGACATTTCCGAAATTGTTATGCTTCAGTGTGATATATGCAAATTCAGCACGAAGCACAAAGAAAGTCTCAAGAAGCACATGGTGATCCATCAGGACCCTTCCAAGGTTAAGATGCACCGGTGCGACAAGTGTGAATTCAAAACACTGCAGAAATATTATCTCGAACAGCACAGGGTGATCCACGAGGAGCCTTCTTACCAATGCGATAAATGCGAGTTTAAAACAAAGCATAAAGTAAGTATCAGGAGACACGTGACGATGCATCAGGAAGCTTCAGAGATCGCAATGTACCATTGCGACGTGTGTGGATACAAGACAAAGTTGAAATCAACCCTCAAGCTGCATATGACGACTCATCAGCCACCTCCCGAAGACACCCTTCATCGATGTACAATCTGTGATTATAAGGCAATGAAAAAACGTTATCTTAAATACCATATGCTGACCCATCAGGATACGCTTCTTCCGAATGCTTCAGATGCGATTGTGTATCAGTGCGACAAATGCGAGTACAAGACAAAGCGTAAATCTAACTTCAGGCAACACATGCCGATCTATCAGGATCGTTCTACAGTCAGTATATATCAGTGCGACGAATGCGAATACAAGACACAGTTGAAATCTTATCTCAAGCGGCATGTGGCGATGCACCACGAACCTGAAGACGGTGTGTATCAATGTAAAGAGTGCGATTATAAGACGATAAAGAAACGTTACCTTAAATCTCACATGATGACCCATCAGGACCCCTCCGAGGTCACAATGTATCGGTGTGACAAATGTGATTATGGGACAAAGTATAAATGGGCCCTGAAAAAGCACACGATGTCTCATCAGGACCCTTCTGAGCACCTTCCTGCGAGTATATATCAATGCGACAAATGCGAGTACCAGTCGAGGCATAAATCCTATCTCAACAAGCACATGGTGACCCACCAGGACCCCTCCGAGGTCCCCATGTATCAGTGCAACGAATGCGATTACAAATCGAAACGTAAGTACCACCTTAAACAGCACATGGTCATCCACCAGACCGATTCCGAAGTCGCCGTGTATCAGTGCAAGAAATGTGATTACAAGGCGAAGCAGAAGAGTTATCTTAGATCCCACATGATGACTCACAGGGACCCTTCTGACGCCGCTGTGTATCAGTGTAAGAAATGCAGTTATAAGGGGACGCAGAAACGTTACCTCAGATGCCACATGATGACCCATCAGGACCCTTCGGAGGTCACGATGCTTCAGTGCGACAAATGCGAACATCAGACGAGGTATAAATCTGTTCTGAAGAAGCACATGGCATCCCATCACGGTTCTTCTGAAGTCGGCGACTATCAGTTTATCAAATGCGAGTAG
Protein Sequence: MANTITKNHSNLNLIPHSKLKHEHKNFDVDTFSENDDNKTKLCEELLSDESYSAIKSERQELSIKSEEFEIKMEEHSYKRTKYKASLRNHMITHRDPSEVTMYHCDKCEYKTKLKFNLKQHMVTHQETLDVMMHRCDKCEFKTKQKYFLDRHSVVHRDICFQCDRCEFKTKHKGSLRNHTLTHQDPSELTMYHCDVCEYKAKLKYNLKHHMLTHRDPTEIVNITQDDPPVCASCNTSLEAFFNIMNSWSSIRQTIKRNDAMPHTITKSHTNINSIPQFELKCEKDDESFELSSMFSVNENGSKLYDCTVSGESSRVVKSEGQESNIKYEEVDLKIEQDTTSLEDYTVTPHELEELKTQSNTTFNYDHQLDQVAQGYVFPRNSSRHILDPSEVRYECDKCDYKAKYMSRIKQHMVVHLDPSEATMYKCLRCDYQAKHEYRLKEHMATHLDASEVTIYKCENCEYTTKYARNLKRHLMLHLDISEIVMLQCDICKFSTKHKESLKKHMVIHQDPSKVKMHRCDKCEFKTLQKYYLEQHRVIHEEPSYQCDKCEFKTKHKVSIRRHVTMHQEASEIAMYHCDVCGYKTKLKSTLKLHMTTHQPPPEDTLHRCTICDYKAMKKRYLKYHMLTHQDTLLPNASDAIVYQCDKCEYKTKRKSNFRQHMPIYQDRSTVSIYQCDECEYKTQLKSYLKRHVAMHHEPEDGVYQCKECDYKTIKKRYLKSHMMTHQDPSEVTMYRCDKCDYGTKYKWALKKHTMSHQDPSEHLPASIYQCDKCEYQSRHKSYLNKHMVTHQDPSEVPMYQCNECDYKSKRKYHLKQHMVIHQTDSEVAVYQCKKCDYKAKQKSYLRSHMMTHRDPSDAAVYQCKKCSYKGTQKRYLRCHMMTHQDPSEVTMLQCDKCEHQTRYKSVLKKHMASHHGSSEVGDYQFIKCE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -