Basic Information

Insect: Aromia moschata
Gene Symbol: wek
Assembly: GCA_029963805.1
Location: JAPWTK010000275.1:290649-295411[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.054 4.2 8.8 0.5 6 21 3 18 2 21 0.85

2 16 0.006 0.46 11.8 2.3 1 23 27 49 27 49 0.98

3 16 0.0007 0.054 14.8 0.4 2 23 56 78 55 78 0.94

4 16 5e-05 0.0038 18.4 1.2 3 23 85 105 84 105 0.97

5 16 0.0024 0.18 13.1 2.5 2 23 116 138 115 138 0.96

6 16 0.00011 0.0086 17.3 2.2 1 23 145 167 145 167 0.98

7 16 6.5e-07 5e-05 24.3 0.4 2 23 174 195 173 195 0.97

8 16 6.8e-08 5.3e-06 27.4 2.6 1 23 201 223 201 223 0.98

9 16 8.7 6.7e+02 1.9 0.1 1 23 285 307 285 307 0.88

10 16 0.64 49 5.4 1.9 1 23 342 364 342 364 0.88

11 16 0.0058 0.44 11.9 4.5 1 23 370 393 370 393 0.97

12 16 0.00012 0.009 17.2 0.9 2 23 404 426 403 426 0.95

13 16 0.0037 0.28 12.5 0.4 3 23 436 456 435 456 0.99

14 16 4.2e-05 0.0032 18.6 3.8 1 23 462 484 462 484 0.98

15 16 6.6e-06 0.00051 21.1 1.1 1 23 490 512 490 512 0.98

16 16 0.087 6.7 8.2 0.9 1 21 518 538 518 539 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.054	4.2	8.8	0.5	6	21	3	18	2	21	0.85
2	16	0.006	0.46	11.8	2.3	1	23	27	49	27	49	0.98
3	16	0.0007	0.054	14.8	0.4	2	23	56	78	55	78	0.94
4	16	5e-05	0.0038	18.4	1.2	3	23	85	105	84	105	0.97
5	16	0.0024	0.18	13.1	2.5	2	23	116	138	115	138	0.96
6	16	0.00011	0.0086	17.3	2.2	1	23	145	167	145	167	0.98
7	16	6.5e-07	5e-05	24.3	0.4	2	23	174	195	173	195	0.97
8	16	6.8e-08	5.3e-06	27.4	2.6	1	23	201	223	201	223	0.98
9	16	8.7	6.7e+02	1.9	0.1	1	23	285	307	285	307	0.88
10	16	0.64	49	5.4	1.9	1	23	342	364	342	364	0.88
11	16	0.0058	0.44	11.9	4.5	1	23	370	393	370	393	0.97
12	16	0.00012	0.009	17.2	0.9	2	23	404	426	403	426	0.95
13	16	0.0037	0.28	12.5	0.4	3	23	436	456	435	456	0.99
14	16	4.2e-05	0.0032	18.6	3.8	1	23	462	484	462	484	0.98
15	16	6.6e-06	0.00051	21.1	1.1	1	23	490	512	490	512	0.98
16	16	0.087	6.7	8.2	0.9	1	21	518	538	518	539	0.95

Sequence Information

Coding Sequence: ATGCTCTGCGGCAAAACGTTTAAGAGGAAACAGGAGGTGTCAGCTCATTCGGCCCACGTTCACGACTCCTCCATGTCGTTTGAGTGCGATTTTTGCTCGAAGAAGCTAAAATCCAGGGCGTCTTGGATGACTCATCGGAAGCGACACCTGAAGGACTACATCGTGAAGTGCGAGCTGTGCTCGCGGGGGTTCGTTACCAAGCAGGAGTACAACAACCACATGGGATCCTCGCACGGGAAGAGCAGCAACATCTGCACGGTCTGCGGCCGCAGCTGCTACGACAAGGCCACCCTGCAGAGCCACATGGCGCGCCACTCCGAGAACTACCTGAGCAGCGCGAACATAAAGTGCAAGCTGTGCGACAAAACGTTCCTGCAGGACAAGTATTTGAAGCGTCACTTCAGGAGGATCCACAAGAACGGCGGCCAGCAGTTCGTGTGCGATCACTGCGGCAAGGAGGTCCGCTCGAAGAGGAGCCTGCACGACCACTTGCTGATCCACCAGGGTCTGAAGCCGATCGAGTGCAAGGAGTGCGGGAGGAATTTCGTGCTGGCGTCCACGTTGAAGCAGCACATGCGCACCCACACCGGAGACAAACCGTACGAGTGTCAGGAGTGCGGGAAATGCTTCACGCAGAAATCACCTCTCACGATACACATGAGGTATCACACGGGCGAGAGACCCTACATGTGCAAGGTCTGCGAGGAAGGgttaaagaaacgaaaattgAGACGTATAAAGAAAGAAGTAGATCCCGACTACGTTGCTCCCAAAGCTAAACAGACCGAAAAGCAGAACGAAAGCATCGTGATACCCAAAGAAGAAACGTCGACCGATGAAAATTCGATCAAATTCGCGTGCGAATTGTGTGAAGAGAAAATCGACTCGAGCATCGACTTTGCCCTCCACTCCGTTAAGCACTCGAGCGACAATAAGTATCACTGTCACTATTGTACCTTCAAGAGCGTGCTAATAAAACGGATGAAGAAACACATGAAGAGCCACGGTAACACGGGAAAGTCCTTCCAGTGCCAGACGTGCTCCAAGATCTTTCCCGAGTGCATACAGGCGATAGAGCACAAGAACTTCCACTCTGGCGAGATGCCTTACAAGTGCGAGACCTGCGAGAAACACTTCATGTTCTCCTGGCTGCTGTTCACGCATCGTCGCTTGTTCCACTGGGACGTAAAGATAGATCCGATTGCTCTGACTTGCGACACTTGCAACATGTCTTTCGGGACCCGCTCAGGATTGCGAAAGCACGTCCTTAGGAAACACAATACCGTACCGAAGGCTGCGCCTCTTTGTGATATATGCGGAAAAATTTTGGCCAACAACGAAACCCTGAAGTTTCACCGGAGAACGCATACCGGTTACAAACCGCACACGTGCACCACGTGCGGAAAGAGCTTCTGCAAGAAGGGCCTCTTAGTTGAACACGAAAGAGTCCATACGGGAGAGAAGCCGTTCATATGCCATTTTTGCGAAAAGGGTTTTTCGCAGAGGGCGCCGCTCAAGATACACATGAGAATACATACCGGAGAAAGGCCGTACGTTTGCCGGATTTGTGGGAAGGGTTGTATTTGTAAGAGCGTCCTTGACGCACACATGAGAAATTGTTCGGGTGTTATGGTGGAATaa
Protein Sequence: MLCGKTFKRKQEVSAHSAHVHDSSMSFECDFCSKKLKSRASWMTHRKRHLKDYIVKCELCSRGFVTKQEYNNHMGSSHGKSSNICTVCGRSCYDKATLQSHMARHSENYLSSANIKCKLCDKTFLQDKYLKRHFRRIHKNGGQQFVCDHCGKEVRSKRSLHDHLLIHQGLKPIECKECGRNFVLASTLKQHMRTHTGDKPYECQECGKCFTQKSPLTIHMRYHTGERPYMCKVCEEGLKKRKLRRIKKEVDPDYVAPKAKQTEKQNESIVIPKEETSTDENSIKFACELCEEKIDSSIDFALHSVKHSSDNKYHCHYCTFKSVLIKRMKKHMKSHGNTGKSFQCQTCSKIFPECIQAIEHKNFHSGEMPYKCETCEKHFMFSWLLFTHRRLFHWDVKIDPIALTCDTCNMSFGTRSGLRKHVLRKHNTVPKAAPLCDICGKILANNETLKFHRRTHTGYKPHTCTTCGKSFCKKGLLVEHERVHTGEKPFICHFCEKGFSQRAPLKIHMRIHTGERPYVCRICGKGCICKSVLDAHMRNCSGVMVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -