Basic Information

Insect: Aromia moschata
Gene Symbol: -
Assembly: GCA_029963805.1
Location: JAPWTK010000487.1:80560-82704[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.095 7.3 8.1 0.7 1 21 129 149 129 150 0.91

2 12 3.7e-06 0.00028 21.9 3.5 1 23 158 180 158 180 0.99

3 12 5.5e-08 4.2e-06 27.7 0.4 1 23 186 208 186 208 0.98

4 12 4.8e-06 0.00037 21.6 2.6 1 23 214 236 214 236 0.99

5 12 0.00022 0.017 16.3 2.5 1 23 242 264 242 264 0.98

6 12 0.00029 0.022 16.0 0.2 2 23 275 296 274 296 0.97

7 12 0.00023 0.018 16.3 1.1 1 23 304 326 304 326 0.97

8 12 1.4e-07 1.1e-05 26.4 6.5 1 23 332 354 332 354 0.99

9 12 1.7e-06 0.00013 23.0 1.3 1 23 360 382 360 382 0.98

10 12 6.2e-06 0.00047 21.2 1.0 1 23 388 410 388 410 0.99

11 12 4.5e-06 0.00034 21.7 1.1 1 23 416 438 416 438 0.98

12 12 0.00022 0.017 16.4 3.9 1 23 444 467 444 467 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.095	7.3	8.1	0.7	1	21	129	149	129	150	0.91
2	12	3.7e-06	0.00028	21.9	3.5	1	23	158	180	158	180	0.99
3	12	5.5e-08	4.2e-06	27.7	0.4	1	23	186	208	186	208	0.98
4	12	4.8e-06	0.00037	21.6	2.6	1	23	214	236	214	236	0.99
5	12	0.00022	0.017	16.3	2.5	1	23	242	264	242	264	0.98
6	12	0.00029	0.022	16.0	0.2	2	23	275	296	274	296	0.97
7	12	0.00023	0.018	16.3	1.1	1	23	304	326	304	326	0.97
8	12	1.4e-07	1.1e-05	26.4	6.5	1	23	332	354	332	354	0.99
9	12	1.7e-06	0.00013	23.0	1.3	1	23	360	382	360	382	0.98
10	12	6.2e-06	0.00047	21.2	1.0	1	23	388	410	388	410	0.99
11	12	4.5e-06	0.00034	21.7	1.1	1	23	416	438	416	438	0.98
12	12	0.00022	0.017	16.4	3.9	1	23	444	467	444	467	0.96

Sequence Information

Coding Sequence: ATGGCTTTAAAAGCTCCAGATTTTCGTATAAAGGAAGAACCCCAGGACGAAACTGACGGAGCTGCAGAATTAAACTCCGCAACTCCGCATATTACCGTAAAACTAGAGGATGACACGGTTTCACAAGACAAGCCCGACTTTATTAATTTAGAGAGTAGTTCTATCAAAGATAATTTTAATGGCATGGTAAAAGAAGATATTTTCTATGAAAATGTGTCTAGTACTGGGCCTCATCCAAGACAAGACATATTTCAGCATGTAAAGCAGCTTCAACAGATGCAGGAAGGTGTTCGGGATGCAGATAATTTACATAAGAAAAAAGATAACTCTGGGTCTGACCCTATAGGGTCTGACAGCTCTTCAAGTGACGATAGCGACGGCGAATTCACATGTAAAGTTTGTAAACAGGTATTTTTGGACGAATTTGATTTACAATTGCATTTCAAGTCGAGACGGTCGGCTGAAAAATGTTATAAGTGTTGTGGATGTGACAAAGTGTTCAGGGATAACACACAGTTGAACGTGCATTCCAGGAAACATACTGGAGAACAACCCTATGCCTGTACTGTGTGTGGGAAAAAATTTTCAGTCAATGGTAACTTAAGCAAACATATGAGGATTCATACTGGCGAACGGCGATATGAGTGTGATACCTGCGAAAGAAAATTTACGCAGTTTGCTCATTTAGAGGATCACATGAAGACACATTCAGGAGATAGACCATACGTGTGTGACTTTTGCAATAGTGCCTTTAAGACAAAGGCGAGACTGAGAAAGCACAGAAAGTCCCACGAAGAtgacaaaattacaaaaaggtCTGTGCCGTGTCCTATATGCTTTAAAATGCTGAAAAGCACCAAGCAGCTCCTGGCCCACATGGACACTCACGATACGGGTGGCACTAACCCATTCCCGTGCAATGTCTGCggcaaaagttataaaaatcTGTTCTACTTAAATTTCCACTTGAAGGTTCATGGAGGAGTGAAAGAATTCAAATGCAACCTGTGCGATAAAGCCTTCTGTAATTCCAGCCACTTGAGGAGACACATGAATTCACATACAggCATAAGGCCATTTAGTTGTGAGTTATGCAAGAGGGCATTTCCCTCCCAACAGAACATGAAAAGGCACATGATGACCCACACAGGTGAAAAGCCGTACAGTTGTCAGGAGTGTGGAAAGGGTTTTTTAACGTTGGAGAATCTAAATCGTCACAAGAGGACTCACACCGGCGAAAAACCATTTCCATGCAatatttgtggaaaattttttgCTCACAGTACAACAGCCAAGGAACACATGAGAATTCACACTGGAGATAAGCCATTCTGCTGCACTCTTTGCGACAAACGGTTCTCACTGAATAAGGCACTTTACAAGCATATTCGGGAACGACACGCCGCTTACTTCCCAGAGTTTAAGAGGATGAATGACCTGCCACCTAACGACATAGTTACAAAGAGTGAGAAAGGGGATGAGGATATTGAAGAGGTTGTGAATGAGATTCCTTTTGTCAAAGTCGAGAAACAAGAGTTTGATTATGTTTAA
Protein Sequence: MALKAPDFRIKEEPQDETDGAAELNSATPHITVKLEDDTVSQDKPDFINLESSSIKDNFNGMVKEDIFYENVSSTGPHPRQDIFQHVKQLQQMQEGVRDADNLHKKKDNSGSDPIGSDSSSSDDSDGEFTCKVCKQVFLDEFDLQLHFKSRRSAEKCYKCCGCDKVFRDNTQLNVHSRKHTGEQPYACTVCGKKFSVNGNLSKHMRIHTGERRYECDTCERKFTQFAHLEDHMKTHSGDRPYVCDFCNSAFKTKARLRKHRKSHEDDKITKRSVPCPICFKMLKSTKQLLAHMDTHDTGGTNPFPCNVCGKSYKNLFYLNFHLKVHGGVKEFKCNLCDKAFCNSSHLRRHMNSHTGIRPFSCELCKRAFPSQQNMKRHMMTHTGEKPYSCQECGKGFLTLENLNRHKRTHTGEKPFPCNICGKFFAHSTTAKEHMRIHTGDKPFCCTLCDKRFSLNKALYKHIRERHAAYFPEFKRMNDLPPNDIVTKSEKGDEDIEEVVNEIPFVKVEKQEFDYV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -