Basic Information

Insect: Aromia moschata
Gene Symbol: -
Assembly: GCA_029963805.1
Location: JAPWTK010000275.1:151147-163121[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 25 7.1e-05 0.0055 17.9 3.4 2 23 51 72 50 72 0.97

2 25 0.0054 0.42 12.0 2.8 1 23 107 129 107 129 0.88

3 25 0.00021 0.016 16.4 3.3 1 23 135 158 135 158 0.98

4 25 0.026 2 9.8 4.3 1 23 170 193 170 193 0.93

5 25 0.26 20 6.7 4.1 3 23 206 226 205 226 0.99

6 25 3.6e-05 0.0028 18.8 5.5 1 23 232 254 232 254 0.97

7 25 0.00033 0.026 15.8 1.6 1 23 260 282 260 282 0.97

8 25 0.031 2.4 9.6 0.3 2 23 325 346 324 346 0.94

9 25 0.21 16 7.0 5.0 1 23 352 374 352 374 0.98

10 25 0.023 1.7 10.0 1.6 1 20 377 396 377 399 0.86

11 25 0.00011 0.0086 17.3 1.3 1 23 405 428 405 429 0.97

12 25 0.022 1.7 10.0 3.9 1 23 440 463 440 463 0.95

13 25 1.7e-05 0.0013 19.8 0.5 3 23 474 494 472 494 0.97

14 25 1.4e-05 0.0011 20.1 2.5 1 23 500 522 500 522 0.98

15 25 0.0005 0.038 15.2 0.4 1 23 528 550 528 550 0.98

16 25 0.34 26 6.3 0.1 1 13 556 568 556 570 0.88

17 25 0.016 1.2 10.5 0.4 2 23 621 642 620 642 0.97

18 25 0.0032 0.24 12.7 6.0 1 23 648 670 648 670 0.98

19 25 0.00045 0.034 15.4 3.4 1 20 673 692 673 694 0.93

20 25 0.78 60 5.2 0.4 1 13 699 711 699 713 0.84

21 25 0.23 18 6.8 2.5 1 23 716 739 716 739 0.94

22 25 0.0064 0.49 11.7 1.5 3 23 750 770 748 770 0.97

23 25 3.7e-07 2.8e-05 25.1 0.9 1 23 776 798 776 798 0.98

24 25 0.0015 0.11 13.7 0.4 1 23 804 826 804 826 0.98

25 25 2.6e-05 0.002 19.2 0.3 2 21 833 852 832 853 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	25	7.1e-05	0.0055	17.9	3.4	2	23	51	72	50	72	0.97
2	25	0.0054	0.42	12.0	2.8	1	23	107	129	107	129	0.88
3	25	0.00021	0.016	16.4	3.3	1	23	135	158	135	158	0.98
4	25	0.026	2	9.8	4.3	1	23	170	193	170	193	0.93
5	25	0.26	20	6.7	4.1	3	23	206	226	205	226	0.99
6	25	3.6e-05	0.0028	18.8	5.5	1	23	232	254	232	254	0.97
7	25	0.00033	0.026	15.8	1.6	1	23	260	282	260	282	0.97
8	25	0.031	2.4	9.6	0.3	2	23	325	346	324	346	0.94
9	25	0.21	16	7.0	5.0	1	23	352	374	352	374	0.98
10	25	0.023	1.7	10.0	1.6	1	20	377	396	377	399	0.86
11	25	0.00011	0.0086	17.3	1.3	1	23	405	428	405	429	0.97
12	25	0.022	1.7	10.0	3.9	1	23	440	463	440	463	0.95
13	25	1.7e-05	0.0013	19.8	0.5	3	23	474	494	472	494	0.97
14	25	1.4e-05	0.0011	20.1	2.5	1	23	500	522	500	522	0.98
15	25	0.0005	0.038	15.2	0.4	1	23	528	550	528	550	0.98
16	25	0.34	26	6.3	0.1	1	13	556	568	556	570	0.88
17	25	0.016	1.2	10.5	0.4	2	23	621	642	620	642	0.97
18	25	0.0032	0.24	12.7	6.0	1	23	648	670	648	670	0.98
19	25	0.00045	0.034	15.4	3.4	1	20	673	692	673	694	0.93
20	25	0.78	60	5.2	0.4	1	13	699	711	699	713	0.84
21	25	0.23	18	6.8	2.5	1	23	716	739	716	739	0.94
22	25	0.0064	0.49	11.7	1.5	3	23	750	770	748	770	0.97
23	25	3.7e-07	2.8e-05	25.1	0.9	1	23	776	798	776	798	0.98
24	25	0.0015	0.11	13.7	0.4	1	23	804	826	804	826	0.98
25	25	2.6e-05	0.002	19.2	0.3	2	21	833	852	832	853	0.93

Sequence Information

Coding Sequence: atgaaagttagAAGCACCGCTACCAAAATATCAGAAGACAAGGAATGGGAGCCTAAGATAACTAAAAAATCGCCAACTcgcaaatataaaaaacacaCGAGCAAACCAAAAAGAATAGTTTTTGATCGAATAGAACTGGACGAGGAACTACGCTGTAAGCACTGCGATAAAACCTTTAAGAACAACATAGACTTCGCCTGGCACTCAAAAACTCACAACGATGACGGCAAGTATTCGTGCCACTTTTGCAAATACAGAACTACTTGCAAGTACCGATCTGAGGCGCACATCAGAAATCACGAAGGCACGTCGAGAAGGTACAAGTGTGAACTGTGCAACAAGACGTTCCGAAAGAGCAGCTACGCCGTGGAACACAAATATTTCCACACGGGCGAGATGCCCTTCCAGTGCGAGGTCTGCGGCAAGCATTTCATGTACTCGAAGACTCTGGCCTACCACCGGCGCAGTTCCCACTACGAGGTGGTGACCGGACAGCCGCAACGAAAGTTCGACTGCACGCTCTGCGACAAGCATTACGAATCTCACTCCGGCCTGCTCAGGCACAATTCGCGATACCACAAGGATCCCGCCACCGGCGGCGGTCTGTCCGTGCTCTGCGACATCTGCGGCAAGAGGCTCTCCTGCAAGTACAAGCTGAAGTTTCACATGAGGACGCACACGGGGTACAAGCCATTCTGCTGTCACGTCTGTTCGAAGACCTTCACCAACAAGGATCAACTGTTGTCACACGAACGCGTGCATACGGGCGAGAAACCGTTCTGTTGCGACTATTGCGGAAAAGCGTTTGGCCAATCGGCCCCCTACAGATACCACGTGAAGACTCACACGGGCGAACGCAAATACGAaacTGGAAAGAAGAGACGCAACAAGAAGGAAAACCTCACGGAACCCAAAGATATCGATGAAAAAGCGAGCAAACTCATCAAACTCCTGAAAGTGGACGGACCGATGGAATGCGGCGCTTGCGGCAAATCCTTCGAAACCCACTTCGACGTGGCCATACATTCGAAGGTGCACAGCAAAGATCGCAACTACTCCTGCCACTTGTGCAATTTCAAGGTGAATTCCAAATTCCGCATTCAGAGGCACATCAAGAGGCACGACGGCTACAAGTGCGAGGTATGCAATAAATTCTTCAAGAGGGGCACCAGCGCGCTGAAGCATTCCTACGCCCACACCGGCATCAAGCCCTACAAGTGCGAAATTTGCGGTAAACACCTGGCCAACCCCAAGAGTTTGGACATGCACCTCAATACCATCCACCACGAGCTCATCACCGGAAAACCGCTGGTGAAATACGACTGCGTCGTGTGTCACAAGCACTACGAGTCGGAGACCGGCCTCAGAAGGCACTACTCGAGTAAACACAAGGAGATAGGGATCGATCTCTCCGTCATCTGCGAGATTTGCGGCAAAAGGATATCGAGCAACACGAGGCTGAAGAGGCACATCAGGACCCACACGGGGCAGAAGCCCTTCCCTTGTCGTGAATGTTCCAGGAGTTTCGCGACAAAGTGTCTGCTCACATCCCACATGCGCGTACATACCGGTGAAAAGCCTTACGTGTGCATGTATTGTGGCAAGAGGTTTGGACAGTCGGCCCCCTACAGGTACCACGTGAAGATCCACACGGGagaaagaaaatacatatgCTCCATTTGCAAGAAAGGATTCATTTCTAACAtaaactcCTGTAACCTTCTCCATATAGACAACGAATTCAGGTCGAAATCTAAAACAAGAAAGAAGGGAGTGCGGAAGAAACTGGAGAAAAAACATCCCCAGCTAACTGAGAGGGTCAATAAAATCACGAATATTTTCGAACTGAAAGATCCCGTCCAATGTAAACTATGTAATGCAAAATTTGACAACAATGTAGATTTTGCGCTGCACTCCAGAAATCACAACGAGGACGGCAAATACTCGTGTCACCTGTGCGACAAACGAGTGTACAAAAAGGGCCACTTCACCAAACACGTGATGTCGCACAACGGTTATAAGTGCGAGTTGTGCGGCAAGGTCTTCAAGAGGCAATCCACCGCCCTGCACCACCATCACAGCTGGGAGAAGTTGTACCCGTGCAAATTTTGCGGCAAGAGCAGTCACCGGCAAGCCCTGCCCAAACACTACTGCACCATCTGCAACAAGAACTACCTGTACGAGAGCGGGCTGAAGTTGCACTACTCCAGCCAGCACAAGGAGTTGGGCATCGATTTTTCCGTGATCTGCGACATCTGCGGCCGGCGAATTTCGTGCAAGAGCAAACTGAAGCAGCATCTCAGGATTCACACGGGCGATAAGCCGTACTCCTGTTCGATATGCGGCCGGAAGTTCACCACGAAGGACCTGGTGACGTCCCACATGCGGGTCCACACGGGCGAGAAGCCCTACGTCTGCAAATTCTGCGGGAAGGAGTTTGGACAGGGCGCCCCCTACAGGTACCACATCAAGACGCACACGGGGGAGCGGTCTTGCAGCTGTCCCATCTGCGGAAAAGGGTTCATTTCCAAGGGCAACATGCGGATCCACATCAAGAGTTGCATTGTGCCGGTGAAAGATGTGCAAAGTGATACGGGTCCAACCGTAACGGTTATTAACAACAGTACTCTGAATAGATGTTAA
Protein Sequence: MKVRSTATKISEDKEWEPKITKKSPTRKYKKHTSKPKRIVFDRIELDEELRCKHCDKTFKNNIDFAWHSKTHNDDGKYSCHFCKYRTTCKYRSEAHIRNHEGTSRRYKCELCNKTFRKSSYAVEHKYFHTGEMPFQCEVCGKHFMYSKTLAYHRRSSHYEVVTGQPQRKFDCTLCDKHYESHSGLLRHNSRYHKDPATGGGLSVLCDICGKRLSCKYKLKFHMRTHTGYKPFCCHVCSKTFTNKDQLLSHERVHTGEKPFCCDYCGKAFGQSAPYRYHVKTHTGERKYETGKKRRNKKENLTEPKDIDEKASKLIKLLKVDGPMECGACGKSFETHFDVAIHSKVHSKDRNYSCHLCNFKVNSKFRIQRHIKRHDGYKCEVCNKFFKRGTSALKHSYAHTGIKPYKCEICGKHLANPKSLDMHLNTIHHELITGKPLVKYDCVVCHKHYESETGLRRHYSSKHKEIGIDLSVICEICGKRISSNTRLKRHIRTHTGQKPFPCRECSRSFATKCLLTSHMRVHTGEKPYVCMYCGKRFGQSAPYRYHVKIHTGERKYICSICKKGFISNINSCNLLHIDNEFRSKSKTRKKGVRKKLEKKHPQLTERVNKITNIFELKDPVQCKLCNAKFDNNVDFALHSRNHNEDGKYSCHLCDKRVYKKGHFTKHVMSHNGYKCELCGKVFKRQSTALHHHHSWEKLYPCKFCGKSSHRQALPKHYCTICNKNYLYESGLKLHYSSQHKELGIDFSVICDICGRRISCKSKLKQHLRIHTGDKPYSCSICGRKFTTKDLVTSHMRVHTGEKPYVCKFCGKEFGQGAPYRYHIKTHTGERSCSCPICGKGFISKGNMRIHIKSCIVPVKDVQSDTGPTVTVINNSTLNRC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -