Amos015672.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Aromia moschata
Gene Symbol
-
Assembly
GCA_029963805.1
Location
JAPWTK010000138.1:535911-562856[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 47 0.0056 0.43 11.9 1.4 1 23 13 35 13 35 0.97
2 47 0.0016 0.13 13.6 2.4 1 23 44 67 44 67 0.95
3 47 0.24 18 6.8 2.1 1 23 107 129 107 129 0.96
4 47 0.038 2.9 9.3 5.7 1 23 151 173 151 173 0.98
5 47 0.13 10 7.6 0.6 1 23 182 204 182 204 0.97
6 47 0.012 0.92 10.9 3.2 1 23 209 231 209 232 0.95
7 47 0.093 7.2 8.1 6.6 1 23 339 361 339 361 0.98
8 47 0.0042 0.32 12.3 2.1 1 23 370 392 370 392 0.98
9 47 0.00018 0.014 16.6 2.3 1 23 398 420 398 420 0.97
10 47 0.017 1.3 10.4 0.1 1 23 429 451 429 451 0.98
11 47 0.001 0.079 14.2 1.8 1 23 460 482 460 482 0.98
12 47 0.00065 0.05 14.9 2.6 1 23 548 570 548 570 0.98
13 47 2.7 2.1e+02 3.5 1.1 1 23 579 602 579 602 0.94
14 47 0.083 6.4 8.2 1.6 1 23 611 633 611 633 0.99
15 47 0.00045 0.035 15.4 1.2 1 23 673 695 673 695 0.97
16 47 0.056 4.3 8.8 2.6 1 23 704 726 704 726 0.97
17 47 0.0035 0.27 12.6 1.0 1 23 735 757 735 757 0.96
18 47 0.079 6.1 8.3 5.4 1 23 766 788 766 788 0.98
19 47 1 80 4.8 3.7 1 23 797 820 797 820 0.96
20 47 0.066 5 8.6 2.4 1 23 918 940 918 940 0.98
21 47 0.006 0.46 11.8 0.5 1 23 949 971 949 971 0.97
22 47 0.4 31 6.1 0.4 1 23 980 1003 980 1003 0.95
23 47 0.12 9.5 7.7 1.4 1 23 1012 1034 1012 1034 0.98
24 47 5.8 4.5e+02 2.4 1.6 1 23 1043 1065 1043 1065 0.96
25 47 0.00031 0.024 15.9 0.7 1 23 1074 1096 1074 1096 0.98
26 47 0.0086 0.66 11.3 2.6 1 23 1105 1127 1105 1127 0.96
27 47 0.00025 0.019 16.2 1.2 1 23 1136 1158 1136 1158 0.98
28 47 0.009 0.69 11.3 0.5 1 20 1167 1186 1167 1188 0.95
29 47 0.03 2.3 9.6 1.4 1 23 1366 1388 1366 1388 0.98
30 47 0.0002 0.015 16.5 1.7 1 23 1397 1419 1397 1419 0.98
31 47 0.89 68 5.0 1.5 1 23 1428 1450 1428 1450 0.97
32 47 0.014 1.1 10.7 0.8 1 23 1460 1482 1460 1482 0.97
33 47 0.36 28 6.2 0.1 1 23 1491 1513 1491 1513 0.97
34 47 0.0012 0.091 14.0 1.5 1 23 1522 1544 1522 1544 0.97
35 47 0.012 0.9 10.9 4.5 1 23 1553 1575 1553 1575 0.98
36 47 0.0022 0.17 13.2 3.7 1 23 1584 1606 1584 1606 0.97
37 47 0.13 9.7 7.7 4.4 1 23 1630 1652 1630 1652 0.98
38 47 0.035 2.7 9.4 0.4 1 23 1661 1683 1661 1683 0.98
39 47 0.027 2.1 9.8 1.4 1 23 1692 1714 1692 1714 0.97
40 47 0.0036 0.28 12.5 1.1 1 23 1723 1745 1723 1745 0.98
41 47 0.0054 0.42 12.0 2.9 1 23 1754 1776 1754 1776 0.98
42 47 1.1 84 4.7 0.2 1 23 1785 1807 1785 1807 0.96
43 47 0.0012 0.092 14.0 2.8 1 23 1816 1838 1816 1838 0.98
44 47 0.12 9.2 7.7 2.9 1 23 1847 1869 1847 1869 0.98
45 47 0.077 5.9 8.3 2.6 1 21 1878 1898 1878 1900 0.94
46 47 0.3 23 6.5 3.2 1 23 1907 1929 1907 1930 0.95
47 47 0.0084 0.65 11.4 4.8 1 23 1954 1976 1954 1976 0.98

Sequence Information

Coding Sequence
ATGTGGATTCATAAGGATGGTTCCGAGGTAGCGACTTATCAGTGCGAGCTGTGCCCTTACAAGACGAACAGGAAGGGACACATGTCCAGACACGCGCTGATCCACAAAGACGCTTCCGAGGTACCGACCTATCAATGCAAGCGTTGCCCTTACAAGACGAAACGTAAGGACAACTTGTTCTCCCACGTTCTCCTTCGCCATCAAGACGCTCCCGACGCGACGACTTTCGAACGGAAATTTTGTCCTGACAAGGCGAATTTGGAAGAGGATTTCATGAGACGCGTGGTGATTCGTGGGGATGCTTCCAAGAGAACAATTTATCTGTGCAAATTATGTGCTTTTAGGACGATACAGAGGGAACATTTGTACAGACATGTTAAGGTTCACAAAGATGCTTGCAAGAAGGCAGGGAATCCCAAAGGTGGTAAGTTGACTAGAGACGTGAGGGTTCATCGCTGCAAGCTTTGCCCCTACAAGTCGAAACTGTTACACAATTTGAAGAGACACCTCCTGACGCACCAGGACCCATCCGAGACGACGATTTACCAGTGCGAGCTTTGCGATTTCAAGACGAGGGATAAGTACTATGTGCCTTCTCACATGCTGGTTCACCAGGGTGCGACGTATAGCTGCGAattttgtccctataaggcgaaacggaAGAGATATTTGACTCGACACGTGTCGGTCCATCACGATGTTTCCAAGGACACTGAAACCACACAGAATCCACAAAAGATTGTGACGGTATTCAAGAAGCTCGAGGGAGGTTTGGGTATTAAGTCAGAAGAACTTTATATTAAAGAGGAGCGCGATGAATGTGACAGgaatggaAATAACACTCTTTCACTAATTGATCCCAGTGTGACGCCCTCTGGCGATATTGAAATAAAACCCTTCATAGATGAATCTTGTAACCCCGAAACAATTCATACAACCCCCGAAAGTGCCTCTGATCAGAACGCAGAGCATCCCAAAGATCGCGAGTCCATCGATGCCGAACAGTTGAAAACTTACCCTTGCAAGCTCTGCTTCTACGAGGCGAAACAGAAGTGCCACCTGACGAGGCACATGTTTACTCACCGAGACGAATCCGAGACGCCGATCTACCGTTGCGACTTCTGTCCATACAAGGCGAAACAGAAAAGGTACCTGACCAGCCACATGCTGAATCACCAGCCTAACGGCACGTACGCCTGCGAGCATTGCTCCtacgagacgaggcggagacgTAATCTGAGGAGGCACATGGCGATCCATAGGGACATATCGAAGGTGACGACTTACGTCTGCGACTTGTGCCCTTACAAGGGCAAACGGATGGGGGATTTGTCCAGGCACGCGTTGACTCACCAGGATATGCCCGAGGAGCCGATTTATGAGTGCGAATTGTGTCCTTACAAGGCCAGACGGAGGGGACATTTGTTTAGGCATATGTTTATTCATCAGGATCTCTCCGAGGTAGCGAATTTGTCCCTGTACAGTCTAAGGTCTCACTGCGACGCTTCCGAAATAAAAATGGGGTGTACCACGGGTGATCAAGACAAGTATCATTGCAAAAATGGTCCTTCCAAGACGAAATTGAAAGAAAATTTGTCCAGACACGTACTGACTCACCAAGACGTTTCCGAAATAAAAACTTacaattgtaacttttgttcTTACAAGGCGAAACAAAACTACCTTTTGAGGCGACACATGCGGATTCACCAAGACGCTTCCGAGGTAACGACATTCGACTGCGAATTTTGCCCTTACAAGACGAAATGGAAGACGTATTTGTCCAAGCATGTACTGGTCCGCCACCAAGACGCTACCGAAGGAACAATCTATGAGTGCGACTtctgttcctacaaggcgaaactgAAGAAGTACCTGAAGGGGCACATGTTGACTCACCAGGATATTTCCGAGACAAAGACTTACCACTGCAAACTCTGCCCTTTTAAGACGAAATGGAAGGAGAGTTTTTCCAAACACAAACTGGTTCACAAACACATTTCCGAAGTGACAACTTTCGACTGCAACGTCTGTCCATATAAGGCGAAACGGAAGATATATTTGAAGAGGCACATGTCGACTCacaaggatatttccgaggtgaTGACTTATCATTGCAACGTTTGTCCCTTCGAGTCGAGACATAAGGTTAGCCTGTCCAAACACGTACTGATTCACCAAGACGTTTCCAAGGTAACGACTTATCAGTGCAAGATTTGTCGGTACAACACGAAGCAGAAGGGAGCTTTATCCAGACACGAGCTGCTTCACCGAGATGCTTCTGAGGTAGAAGTTTACCATTGCAAGCTTTGTCCTTATAAGGCGAGATTGAAACACTACTTGACCAGACACATGCTGAGTCACCAAGCAGCGTCTAGTGCGAAAATCTATCATTGCAAAGTGTGCCCCTACAAGTCTAAAAGGAAATATATCGTGAAGAAGCATATCTTACGTCAACATAAAGAGAAACTGACCCAGCAGATTCATCAGGACGCTTCAGAGGATGCTAATTCTGCACAAAATCATCAAGAGTGTATGATGGAATATGAGCTTGAGGGGAGTGTGGACATAAAGTCAGAGGAACATGATATTAAAAGGGAGGAAGATGGATGTGCCGACGTGATACTTTCTGGTGATACTGAAATAAAGTCCTTTTCTGATACGTCTTATGATCCCGAGACGAATCATTGGACAGTCGAGAGCGGACTATGTGAGGACACTTCCGAAATAGAAATGGATGATCAAGACAAGTACCATTGCAAAGATTGCCCTTTCAAGACAAAATGGAAAGGAAATTTGTCCAGACACGTACTGACTCACCAAGACGTTTCCGAAGTAACAACTTACGATTGTAActtttgtccctataaggcgaaactgAACGGCAGTTTGAAGaggcacatgttgattcatcaagacgcttccgaggtaacgactttCGACTGCGAACTTTGCCCTTACAAGACGAAATGGAAGGTGAATTTGTCCAAGCATGTTCAGATCCGCCACCAAGACTCCACCGAAGTAACAATCTATGAGTGCAACTtctgttcctacaaggcgaaactgAAGAAGTACCTGAAGGGgcacatgctgattcacaagGATATCTCTGAGATAACGACTTACCACTGCAAACTCTGCCCTTTTAAGACGAAATGGAAGGAGGGTCTGTCCAAACACGAGCTGGTTCACAAAGACGTTTCGGAAGTGCCGACTTACGACTGCGACGTCTGTCCGTATAAGGCGAAACGGAAGATATATTTGAGGAGGCACATGTTGACTCacaaggatatttccgaggtgaCGAGTTACCATTGCAACGTTTGTCCCTATCAGACGAGACATAAGGGAAACTTGTCCAAACATGTAGTGATTCACCAGGACccttccgaggtaacgactttTCAGTGCAActtttgtccctataaggcgaaactgAACAGCAATTTGAAGAGGCACATGTTGATTCACAAAGATGCGTCCGAGGTAACATCCTATCAGTGCAAAATTTGTCCGTACAAGGCGAAATCGGAGGACTACTTGACGAGACATGTCGAACATGTGTCTAATGTGACGACTTATCTTTGCAAAGTTTGCACCTACAAGTCCAAATGGAAATATATCGTCAAGAGGCATATCTTGGTTGACCATAAAGCGAAACTGAAAGGGAATTTGACCCAACACACGTTGATTTATCACGATACTTCTAAGGATGCCAAGTGCCCACAAAGTCAACAAAAAGGTACGATGGAACACTCTCAGCTCGATGGATGTTTGGGCATTAAGTCGGAAGAACTTAATATTAAAAAGGAGGAAGATGAATGTGACGGGTCTGTAACAGACGAGTCTGTCGTTATAGGGTCCTTTTCATCGTCCGATACTTTCCCAGCTTCAGAGATTCAAAAATTGGACTCGGAAAATATGATAGTTTCTGGTGGTACTGAAATGAGCTCCATTTTGGATACGTCTCATAACCCCGAGACAAATCATATGGCCATCGCAAGCGGTTCTTATCAGGATTGTTTCGAAATGGAAATGGAGTCTCCCGAGGGTCGTCAGGTCAAGTTAACCGAAAATGTAAAAGGAACGATCCACCGTTGCAAACTGTGCCCCTATAAAACGAAATGGAAGGGAAATTTGTCGGCACACATCCTGACTCACCAGGACGCGTCCGAAATAATAACCTACGACTGCACCTTTTGCCCTTACAAGGCGAAACAGAAGAGCAATCTGACCAAACACCTGTTGACTCATCAAGATTTATCGGAGGTGACGACTTACGACTGCAAAATCTGCCCGTACAAGTCAAAGTGGAAGGCGTGCTTGGGACGACACGTCCAGACCCACCAGCAAGACGCCTCCCAACTGACGACGTACGCCTGCACCCTGTGCTCCTACAAGTCGACGCTGGAGAAGTCCCTGAGGCGGCACATGTTGGTCCACAAGGACGCCTCTGAGATGACGACTTACCAGTGCAACGTGTGCCCCTACAACACGAACTGGAAGCCCTATCTGTCGGCGCACCTGCTGATCCACCAGGACGCCGCCAAGGCGGCGACCTTCGACTGCGACTTCTGcccctacaaggcgaaacggaAGATATACCTGAAGAGGCACATGCTGACCCACAAGGACATTTCCGAGGTGACGACGTACGACTGCAACTACTGCGCTTACAAGTCGAAACGGAAGAAAGACCTGCACAAGCACCTGCTGACTCACAGGGATATTTCCGAGGTGACGACCTACGACTGCTACCACTGtccctacaaggcgaaacggaAGGGACATCTGACGCAGCACATGTTGGTACACCAGTACAGTTCCGAGaatgcacaagatcccgaaGATCACGAGTCAGTCGAAGACGCAAAGGTAAAAACTTACCCTTGCCAGCTTTgctcctacaaggcgaaactgAAATGCCACTTGACGaggcacatgttgattcatcagGACGCCTCCGAGGTGACGACTTACCAGTGCGAAATTTGTCCTTATAAGACGAAGTGGAAGGACTCCTTGTCCACGCACGCGTTGACCCACAAAGACGTTTCCGAGATAACGACTTACGACTGCAAGCTGTGTTCGTACAAGGCGAAATTGAAGAATTATTTGACCAGGCACATGTTGATCCACCAGGCCGAGTCCGACGTGACGACGTATCCTTGCGAGCATTGTTCCTACGTGGCGAAACTAGAGCGCAATTTGAAGAGGCACATGACGATCCACAAGGATATGTCCGAGGTGATGACTTACCACTGCAACTTTTGTTCTTACAAGGCGAAACGGAAGGGCGATTTGTCCAGGCACATGCTGATTCACCGGGATATCTCCGAAGTAACCACTTATGAGTGTAAGCTCTGCCCCTTCAAGACGAAATGGAAGGAGGGCTTGGCCAAACACGAGCTGATTCACAAGGATacttccgaggtaacgacttaccAGTGCACCTTTTGTCCCTACTCGGCGAAACACAAAAACTATTTGACGAGGCACATGGTGATCCATAAAGACGTTTCCAAGGTGACGACTTACCACTGCAAATTTTGTCCCTACAAGGCGAAACTGAAGGAATACCTGACCAAACATCTGCTGATTCACAAGGACCTCTCCGACATAACGACCTACGACTGCGAGCTgtgtccctataaggcgaaatcGAAGAACTACTTGACCAGACACATGTTGTGCCACCAGACCGACGCCACTACGTATCCGTGCAAGCTCTGCCCCTACAAATCGACGAGCAAATACATTCTCAAGAGGCACACCTTCGTCCACCACAAAGCGAAACTAAAAGGGAATTTGACACAGCACGTGTCGATTCACAAAGACGCCTTCGAGGTGGCAACTTACCAATGTAAGCACTGTTCTTACAAGACGAGGCGGAAGGGGTACATGTCTAGGCATCTTCTGATCCACCAGGACGGTTTCAAGGAGAATAACATTACGCACTTCACTGTGGCTCCGCCCACCGCCGCAGCCACGCCCACTGCCATGGTCCCGCCCACTGACACGGTCCCGCCCACTGCCATGGTCCCGCCCACCGCCGCGGCCCCGCCTTCCCATGGGCCCCGCCCACCGCCGTGGTTCCGCCTACCGCTGCGGCCCCGCCTACCGCCGGGACCCCGGCCACGACCGTCAAAGGTGTAA
Protein Sequence
MWIHKDGSEVATYQCELCPYKTNRKGHMSRHALIHKDASEVPTYQCKRCPYKTKRKDNLFSHVLLRHQDAPDATTFERKFCPDKANLEEDFMRRVVIRGDASKRTIYLCKLCAFRTIQREHLYRHVKVHKDACKKAGNPKGGKLTRDVRVHRCKLCPYKSKLLHNLKRHLLTHQDPSETTIYQCELCDFKTRDKYYVPSHMLVHQGATYSCEFCPYKAKRKRYLTRHVSVHHDVSKDTETTQNPQKIVTVFKKLEGGLGIKSEELYIKEERDECDRNGNNTLSLIDPSVTPSGDIEIKPFIDESCNPETIHTTPESASDQNAEHPKDRESIDAEQLKTYPCKLCFYEAKQKCHLTRHMFTHRDESETPIYRCDFCPYKAKQKRYLTSHMLNHQPNGTYACEHCSYETRRRRNLRRHMAIHRDISKVTTYVCDLCPYKGKRMGDLSRHALTHQDMPEEPIYECELCPYKARRRGHLFRHMFIHQDLSEVANLSLYSLRSHCDASEIKMGCTTGDQDKYHCKNGPSKTKLKENLSRHVLTHQDVSEIKTYNCNFCSYKAKQNYLLRRHMRIHQDASEVTTFDCEFCPYKTKWKTYLSKHVLVRHQDATEGTIYECDFCSYKAKLKKYLKGHMLTHQDISETKTYHCKLCPFKTKWKESFSKHKLVHKHISEVTTFDCNVCPYKAKRKIYLKRHMSTHKDISEVMTYHCNVCPFESRHKVSLSKHVLIHQDVSKVTTYQCKICRYNTKQKGALSRHELLHRDASEVEVYHCKLCPYKARLKHYLTRHMLSHQAASSAKIYHCKVCPYKSKRKYIVKKHILRQHKEKLTQQIHQDASEDANSAQNHQECMMEYELEGSVDIKSEEHDIKREEDGCADVILSGDTEIKSFSDTSYDPETNHWTVESGLCEDTSEIEMDDQDKYHCKDCPFKTKWKGNLSRHVLTHQDVSEVTTYDCNFCPYKAKLNGSLKRHMLIHQDASEVTTFDCELCPYKTKWKVNLSKHVQIRHQDSTEVTIYECNFCSYKAKLKKYLKGHMLIHKDISEITTYHCKLCPFKTKWKEGLSKHELVHKDVSEVPTYDCDVCPYKAKRKIYLRRHMLTHKDISEVTSYHCNVCPYQTRHKGNLSKHVVIHQDPSEVTTFQCNFCPYKAKLNSNLKRHMLIHKDASEVTSYQCKICPYKAKSEDYLTRHVEHVSNVTTYLCKVCTYKSKWKYIVKRHILVDHKAKLKGNLTQHTLIYHDTSKDAKCPQSQQKGTMEHSQLDGCLGIKSEELNIKKEEDECDGSVTDESVVIGSFSSSDTFPASEIQKLDSENMIVSGGTEMSSILDTSHNPETNHMAIASGSYQDCFEMEMESPEGRQVKLTENVKGTIHRCKLCPYKTKWKGNLSAHILTHQDASEIITYDCTFCPYKAKQKSNLTKHLLTHQDLSEVTTYDCKICPYKSKWKACLGRHVQTHQQDASQLTTYACTLCSYKSTLEKSLRRHMLVHKDASEMTTYQCNVCPYNTNWKPYLSAHLLIHQDAAKAATFDCDFCPYKAKRKIYLKRHMLTHKDISEVTTYDCNYCAYKSKRKKDLHKHLLTHRDISEVTTYDCYHCPYKAKRKGHLTQHMLVHQYSSENAQDPEDHESVEDAKVKTYPCQLCSYKAKLKCHLTRHMLIHQDASEVTTYQCEICPYKTKWKDSLSTHALTHKDVSEITTYDCKLCSYKAKLKNYLTRHMLIHQAESDVTTYPCEHCSYVAKLERNLKRHMTIHKDMSEVMTYHCNFCSYKAKRKGDLSRHMLIHRDISEVTTYECKLCPFKTKWKEGLAKHELIHKDTSEVTTYQCTFCPYSAKHKNYLTRHMVIHKDVSKVTTYHCKFCPYKAKLKEYLTKHLLIHKDLSDITTYDCELCPYKAKSKNYLTRHMLCHQTDATTYPCKLCPYKSTSKYILKRHTFVHHKAKLKGNLTQHVSIHKDAFEVATYQCKHCSYKTRRKGYMSRHLLIHQDGFKENNITHFTVAPPTAAATPTAMVPPTDTVPPTAMVPPTAAAPPSHGPRPPPWFRLPLRPRLPPGPRPRPSKV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-