Basic Information

Insect: Aromia moschata
Gene Symbol: -
Assembly: GCA_029963805.1
Location: JAPWTK010000717.1:19971-32060[+]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 1.5e-10 3.6e-07 30.9 3.2 3 44 24 65 22 65 0.95

2 16 1.1e-11 2.7e-08 34.5 0.8 3 44 93 133 92 133 0.98

3 16 5.8e-11 1.4e-07 32.2 2.0 3 44 160 201 158 201 0.93

4 16 5.7e-06 0.014 16.2 2.7 4 44 210 255 208 255 0.83

5 16 9.3e-12 2.3e-08 34.7 1.6 1 44 368 410 368 410 0.96

6 16 8.8e-07 0.0021 18.8 0.1 2 44 445 486 444 486 0.94

7 16 4.3e-05 0.11 13.4 0.4 27 44 515 532 511 532 0.86

8 16 0.0015 3.6 8.5 0.3 12 44 553 585 547 585 0.88

9 16 3e-14 7.3e-11 42.7 3.1 3 43 672 711 670 712 0.96

10 16 2.4e-07 0.00058 20.6 0.5 6 44 737 773 735 773 0.90

11 16 0.33 8e+02 1.0 0.0 3 11 808 816 806 829 0.78

12 16 2.8e-13 6.9e-10 39.6 4.6 2 44 835 876 834 876 0.94

13 16 5.2e-12 1.3e-08 35.5 2.5 3 44 928 966 926 966 0.94

14 16 4.9e-06 0.012 16.4 11.1 1 44 982 1022 982 1022 0.93

15 16 8.1 2e+04 -3.5 0.0 18 26 1069 1077 1061 1080 0.79

16 16 1.5e-11 3.6e-08 34.1 6.0 1 43 1090 1131 1090 1132 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	1.5e-10	3.6e-07	30.9	3.2	3	44	24	65	22	65	0.95
2	16	1.1e-11	2.7e-08	34.5	0.8	3	44	93	133	92	133	0.98
3	16	5.8e-11	1.4e-07	32.2	2.0	3	44	160	201	158	201	0.93
4	16	5.7e-06	0.014	16.2	2.7	4	44	210	255	208	255	0.83
5	16	9.3e-12	2.3e-08	34.7	1.6	1	44	368	410	368	410	0.96
6	16	8.8e-07	0.0021	18.8	0.1	2	44	445	486	444	486	0.94
7	16	4.3e-05	0.11	13.4	0.4	27	44	515	532	511	532	0.86
8	16	0.0015	3.6	8.5	0.3	12	44	553	585	547	585	0.88
9	16	3e-14	7.3e-11	42.7	3.1	3	43	672	711	670	712	0.96
10	16	2.4e-07	0.00058	20.6	0.5	6	44	737	773	735	773	0.90
11	16	0.33	8e+02	1.0	0.0	3	11	808	816	806	829	0.78
12	16	2.8e-13	6.9e-10	39.6	4.6	2	44	835	876	834	876	0.94
13	16	5.2e-12	1.3e-08	35.5	2.5	3	44	928	966	926	966	0.94
14	16	4.9e-06	0.012	16.4	11.1	1	44	982	1022	982	1022	0.93
15	16	8.1	2e+04	-3.5	0.0	18	26	1069	1077	1061	1080	0.79
16	16	1.5e-11	3.6e-08	34.1	6.0	1	43	1090	1131	1090	1132	0.94

Sequence Information

Coding Sequence: ATGGTTCTAGTAACACAAATAATGAATCTGGAGCTTCATATTCTCATCACGTGGCGCAAATGGAGCTTTGCTTGGCGACACTTCAAGAGGAAGGACGACCCAAACAGAGCGGTATGTAATTATTGTTCAAAAGAATGCAACACCACTAGCGGAAATACAACGGGGATGAGACTCCACCTAAAAATGCACCATCCAGAAAAAGTAACAGGTGAAATTGGATTCTTCGAACTTAGGAACAAGTCTAGAGGCATTCGATCCATTAGACATAGCACATTTGTTTGGAACCACTTTGAAAAGGATGATGGTGGTGGTAGCGCCAAATGTGTGCATTGCGAAAAGACATTTGTTGCCAATGGAAAGATGAATAACCTCTATAAACATTTAGTCCGCCGTCATAAAGATAAAATATCTCCTGAAAAGTGTCAAAACGAGGTTGACAGAGTGAAACGATGTTATAACAGGCAAAACAGGAGTTTTGTTTGGAATCACTTCGAGAAGAGCCACGTACCGGAAAAAGCGGTTTGCAATTACTGCTCGAAACACTTTAAGACCAACGAAGGGACTACGTCCGGTTTAAAGACGCACTTGTTGAATGTACACCCCGGAAAAGATTCAGTATTAGACACTTGGACACACTTCAACGTCTGTGAACAAGAGGAGGGAACCGACAATCCTCGCAATGCTCTTTGTGTTCATTGCAATGAAATTGTAGTTTGCAACGGTGACACGACCAATTTAACAAATCACTTGATAGAGCACCATAAAGATGAGATAAAACCGCTCGACGATGAAAATGATagcaagtttttaacaaatgaaaataccTGTGACTACGACCTTCTAGAACACCAGTACGATATCTCTGAGTGTCACAGAAATATAATCAATAACGAACGTAACGAACACGCTCCAAATGCCATCGAACAAATTCTTCTACCAAAAGGTTCAATAGACTGCGAAACTGTACTTGAGGAGCATCAGAGTTTTGTGAAGACCGCCAATGAAGAAAATAGTGAACCTCCAAAGAATCTAACAGATGAGGAAAACAATGCTGTCATCGATAACGAACGAGACGGATCTAGAAAAACTCACAAGCAACGGAGTGCCGTCTGGTCTCATTTTCGAGTCACCGAGGATCCTGGAAAGCTGATCTGTATCCACTGCAGGGGCGAATATAACAACAACGGAAAAACCAGCAATATAAAGAGGCACTTGATGAGGTATCATAGAGACGAAGCACCAgatatagataacgaaagtAGCCAGCATTCGATGGAAGACCCGTTGTCAATCCCTGAACCAAAAGTTCGATCGAGAAAAATAAATGGGACTCCGGTTTGGAAGTATTTTGAACAAAGTGACATACCAGATAGAGCACTGTGCCTCATCTGTAAAGATCTGTGCGATATTGGCGAAAATTCGAATTGTCTAGAAGAACATTTGATTCAGTACCATAAAGAGATAAAACACGATAATAATGAGGATAAATTGGGAGTTTCCGAACAGTGGACAGGCAATATGCGTTCACTGCAAGGAGAGTACTGCAGCAGCGGCAATACGACCAACTTGAAAAATCACATAGTAAGGATGCACAAAGACAAGGTGTTTCCATTTACGGAGGATGATGGTGCTTCGAACAGAAGCACCAGCTTGAGAACACAAAAGAGTAACGCAGTATGTTTACTTTGCAAGAAGGAATGGTCTACTGTCGAGGATTTAAAACCTTTAGAAAACCACTTGATAAAATACCACAACGTGAAGGTTACACAGGACGAGGATGACAGACGACTTGGAAGCTTATCCGACAGTGACGACAACGAACAGCCAATGACAGACGAGAATCTTCCAGAGGACAGGAAAAATGTAGCTGTCGATGATGTTGAAAATATGGAGTCCGTAGAGGAATCCCTTGCCTTTTCACCATCGAATATTCAACTCCTTGAGGTGTCCGAGCTCGATGACGAAATCGATGAGGGTCACCAACGTTTCTCCAACAAGCGTAATAGAAGTTTCGTATGGAACTACTTCACGAAAAGCAGATCGCTACACAAAGCAATATGCACACTGTGCCATGAAGAATACAGTTCGAGCGGAAATACAACCAATCTAAAGGATCATCTGGTGAGACGCCACGTAGACCAACTATTGCTAGACGGGGAGGACGCCCTTCTCCAAGACTCGAAACTCGAGGAGGATTCCATACCGGATCATTTCGAGAAGAGCGCAACGCCCAATAAGGTCGTGTGCGTCTACTGTAAAGACGAGTGCAGTGTCAAGAATACGGCCGCCTTGAAGAGGCACTTGCTGCGATTCCACAGACACCAGATAAACGCTAGCGACGTAGAGACTTCCATTCCTATAGAGCAGAGTGCCTCAGTGAAGCAGGAAATGACGGAGTCGGTGAAGGACCATCACAGCTTCGTGTGGGAACACTTTCGGAAAATTATACCATCTACGGAGGCAACACGCGGAAAAATTAGTACAAACGCGCGACCAAGAGCCGAGGTTTGGAATCACTTCGAGCGTGGCGACACTAAGGACACGGCGACATGCAATCACTGCGGAAAGACGTACAGGACGTTCGGCAGTACCACCAACATGAGGCACCATCTGGCGAGACACCACCAGGATGTATTGCGAGACAATGAAGTTGAAAATCCGGTTTTGATTGATGAGGAGAAAGCCGCTCGCGATGCAGATGATGATATAAACATTAacgatttaataatatttcgAAACGCACCGAAGGAAAAATATCACAATAGATCGACGAGGAGTTTCGTCTGGGACCACTTCACCAAGGGCAAGGCGCGAACAGCGACGTGCAACCACTGCGGCAAGCCTTACAAGTTCAGTAACACCTCTAATTTGAAGCAGCACTTGGTGATATTTCACAAGGACGTGATCGAGGAGACTCCAACCACAGTTACCAATGAGGAAGAGTCAAAGGTTTGGGAGCATTTCAAAAACTGCCGCGCGCGACATTTTGCCAAGTGCAACCATTGCGCTAAGTTGTGCAGGAACAACGTCACGGATTTGCGAGCCCATTTGGCGAAGCATCATAGCGAAGTAAGCGGCGAAGATGCCGCGGTCGTAGAAGAAGCAGAGATGGAAGATACGCTTTCTTTGCCAGGAGAGAATTCGTTACACGAGGGAGAAACAGTTGAAGGCGACGTAGAACATCCCGAGGCCAGCGAAAGGGAAAACTGCGAGTTTTGTGTCGAGACACTTTACCAAGACGAAAGTATGGCACAGGGTGTTGTAAAGAGTCTGGTGTGGAACCACTTCCGGAAGAGTTACGTTCCGAGCTTTGTGGTGTGCAATCACTGCGAGAAGCTGTGCAAACACTCGGGGAACACCTCGAATCTCTGGAAGCACTTGACAGTGCAGCACGGGGTGGAAGTACAGCGAAGCTTGGAAGAGAAGTCGATTTTCCTGGAAGAAGGCGGCGAAGTGCTAGTAGCTGACGAAGTGGATCAATTGACGAAGTGCCTCAAGGAGAAAGCCGCAGTAAATTATGATGCGTACACCTATGTCTCGCGGCACATTTCGTCCAACTCCACCCATAAGGCACGTCTGGCAACGCCGCGTCGCAATCGTCCGACTGGCATCGAGCAGGCGCGCGCTCTTCGCGGCTTCGCTTCGCGTCTAGTGGGCGCGGAcgcgaaaaatttgaaaatcgcCGGCGGTCAACAAACGAGCGGGCGCCCCGCGTCGTCAAATCTTCGTCGTGCGTGCACGTATTTGAAGTCCAACTGCCTCCGTCCGCTCGCCCGACCAATTAAATTAGAATTGACCGTCGGGCCCGCGACCGCCGCTGATAATCCCGCGTATCGTAAACAGCGGCCCCGCGCATAA
Protein Sequence: MVLVTQIMNLELHILITWRKWSFAWRHFKRKDDPNRAVCNYCSKECNTTSGNTTGMRLHLKMHHPEKVTGEIGFFELRNKSRGIRSIRHSTFVWNHFEKDDGGGSAKCVHCEKTFVANGKMNNLYKHLVRRHKDKISPEKCQNEVDRVKRCYNRQNRSFVWNHFEKSHVPEKAVCNYCSKHFKTNEGTTSGLKTHLLNVHPGKDSVLDTWTHFNVCEQEEGTDNPRNALCVHCNEIVVCNGDTTNLTNHLIEHHKDEIKPLDDENDSKFLTNENTCDYDLLEHQYDISECHRNIINNERNEHAPNAIEQILLPKGSIDCETVLEEHQSFVKTANEENSEPPKNLTDEENNAVIDNERDGSRKTHKQRSAVWSHFRVTEDPGKLICIHCRGEYNNNGKTSNIKRHLMRYHRDEAPDIDNESSQHSMEDPLSIPEPKVRSRKINGTPVWKYFEQSDIPDRALCLICKDLCDIGENSNCLEEHLIQYHKEIKHDNNEDKLGVSEQWTGNMRSLQGEYCSSGNTTNLKNHIVRMHKDKVFPFTEDDGASNRSTSLRTQKSNAVCLLCKKEWSTVEDLKPLENHLIKYHNVKVTQDEDDRRLGSLSDSDDNEQPMTDENLPEDRKNVAVDDVENMESVEESLAFSPSNIQLLEVSELDDEIDEGHQRFSNKRNRSFVWNYFTKSRSLHKAICTLCHEEYSSSGNTTNLKDHLVRRHVDQLLLDGEDALLQDSKLEEDSIPDHFEKSATPNKVVCVYCKDECSVKNTAALKRHLLRFHRHQINASDVETSIPIEQSASVKQEMTESVKDHHSFVWEHFRKIIPSTEATRGKISTNARPRAEVWNHFERGDTKDTATCNHCGKTYRTFGSTTNMRHHLARHHQDVLRDNEVENPVLIDEEKAARDADDDININDLIIFRNAPKEKYHNRSTRSFVWDHFTKGKARTATCNHCGKPYKFSNTSNLKQHLVIFHKDVIEETPTTVTNEEESKVWEHFKNCRARHFAKCNHCAKLCRNNVTDLRAHLAKHHSEVSGEDAAVVEEAEMEDTLSLPGENSLHEGETVEGDVEHPEASERENCEFCVETLYQDESMAQGVVKSLVWNHFRKSYVPSFVVCNHCEKLCKHSGNTSNLWKHLTVQHGVEVQRSLEEKSIFLEEGGEVLVADEVDQLTKCLKEKAAVNYDAYTYVSRHISSNSTHKARLATPRRNRPTGIEQARALRGFASRLVGADAKNLKIAGGQQTSGRPASSNLRRACTYLKSNCLRPLARPIKLELTVGPATAADNPAYRKQRPRA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -