Basic Information

Gene Symbol
-
Assembly
GCA_029963805.1
Location
JAPWTK010000486.1:166902-170745[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 0.00018 0.29 12.0 2.4 1 46 72 131 72 131 0.86
2 4 7.1e-05 0.12 13.3 1.5 1 45 195 253 195 254 0.88
3 4 4.2e-06 0.0069 17.3 0.8 3 43 324 378 323 381 0.86
4 4 0.0016 2.6 9.0 1.3 3 46 477 534 475 534 0.85

Sequence Information

Coding Sequence
atggaGCCTATTGAAATATTTGATGCCATTAATAATAAACACATCAACGTATATGTTACGACTGAGATCGCTGAAAAATGTCGGACAGataatgaatttgCCCAAGATTTATTTAACAAACTACAAGACCAGAATATAGAGGATGGTAGTGCGATTGAAATAGAGACTATAAAATGTGAAATCGAGGAGCCGAGTGTCGAAGACAGGTCTGAAAAAGAAACGTGGGGTAGACGTGAAACTTTGAAACTGATAAAAGCGTATCAAAAACATTACGATAAATTTAAAGACCATCCTCAGAAAAAGGCTTTGTGGACAATAATTGCAAATGATTTAGCCCAACAAAACATTCACAAATCAGCAGAAAAATGTGCAGAGAAATGGAAAAACCTAAAAAGAACATATAAAAGTGCTAGTGAAAGACCCTCTATCCCCACTCGATTCCAGTACCTTGAGgaaatgcaaaatatatttaataataccgAGGTAGTAGTATCAGATTCTGATGCAGATGGTGAGAGAGAAGTAAAATATGACCCCGAATTAGATCAGTCGCATGTTACTTCTGTAGAAGAAACTGTTGAGAAGGAAAGTTGGTCTCGATATGAAACACTGaagttattaaaatgttttcagaAGCATAAAGGTCTTAAGCATAAATATGCAACAGACAAAAAGTTTTGGGCTGCGATTGCAGCCGAGTTGACAAAAGATAATATTCAGAAGTTACCTGAAAAGTGTGCCACCAAATGGAAGAATCTTTATCggagctataaaaaaaatattgataaatcaTCTGTTCCAGTACGGTTCCAGTATTTCCAAGAAGTAAGTGATGTCTTGAATGATATTGAGCTAGAGGATGTTGAACTAATAGATGACGTGGATTTTGAAAAGGTTCTTGACCCTGAACAGTTTAAGTGTTCTATTACCGATAAAGGTAATAACCAGACAAAATTCAAAGATATCGCTTCCTGGTCAGCCGATGAAACTTTGAAGCTTATTAAGGCCTATAAGAAGCATAAGCATAGATTTAAAATGTGCCCATCAAAGAAATACGTGTGGGCAATAATAGTGTCTGAGCTTGCCAAAGAAGGCGTCCACAGGGACATCGAGAAGTGCGAGAATAAATGGAAAGGCCTTCTGCGTTCTTTCAGAAGAGGCATGGAGTGCGGGGAATCACCTAGATTTTACTTCTATGATCAAATTTCCGATGTTCTAAACGATGGCGCCATAAATGAGGGTGAAGTATCAACTACGCAAAATGATACTTATGAGGATACTGAATTTCTGTCTAATGGTGATCAAGATATGGAAAATAATGAGTATATTTCAGAAAATGAAGGTGTCGAAGAAGGCGAAAACATGTCATACGAACAAATTATAATTCAAACTGAACCAGATCAATTGAGCGAGACAGATGATAGTAAATATTGGTCGTATAATGAGACTTCTGCCCTTCTCAAGGCTTATGCTAGTCGCAAAAACAACATCAAGGAGTTGAGAAGGAATAATCAGCTGTGGGAGGGGATATCTCAAGAATTGGCATCACATAACATGCACAAATCACCCGAGAACTGTGAGAAAAAATGGAAGAGTATGCTTACAGTGTATAAGACTCACAAAATGAACAATACTGGGCCAgggaaatttagtttttatagaGAGATGGATGCTATGCTCACAGAGGGCCAACTGGAAACTAATGAACTTGAAGAAAATGTTGCACATAATCCAAAATGCAAATGCATGCAGAAAAGAATGCTTGAAAAGCAGCAGAGGCATATAGAACGTATGCAACTGTTGAAAAGGAAGTTAGACTTGGAGGAGCGGAAGGTAGAGGCTTTCGAGTATTATGTTAAGCACCTAAAAACTAAGAGCGATAAAACATAG
Protein Sequence
MEPIEIFDAINNKHINVYVTTEIAEKCRTDNEFAQDLFNKLQDQNIEDGSAIEIETIKCEIEEPSVEDRSEKETWGRRETLKLIKAYQKHYDKFKDHPQKKALWTIIANDLAQQNIHKSAEKCAEKWKNLKRTYKSASERPSIPTRFQYLEEMQNIFNNTEVVVSDSDADGEREVKYDPELDQSHVTSVEETVEKESWSRYETLKLLKCFQKHKGLKHKYATDKKFWAAIAAELTKDNIQKLPEKCATKWKNLYRSYKKNIDKSSVPVRFQYFQEVSDVLNDIELEDVELIDDVDFEKVLDPEQFKCSITDKGNNQTKFKDIASWSADETLKLIKAYKKHKHRFKMCPSKKYVWAIIVSELAKEGVHRDIEKCENKWKGLLRSFRRGMECGESPRFYFYDQISDVLNDGAINEGEVSTTQNDTYEDTEFLSNGDQDMENNEYISENEGVEEGENMSYEQIIIQTEPDQLSETDDSKYWSYNETSALLKAYASRKNNIKELRRNNQLWEGISQELASHNMHKSPENCEKKWKSMLTVYKTHKMNNTGPGKFSFYREMDAMLTEGQLETNELEENVAHNPKCKCMQKRMLEKQQRHIERMQLLKRKLDLEERKVEAFEYYVKHLKTKSDKT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-