Amos011943.1
Basic Information
- Insect
- Aromia moschata
- Gene Symbol
- -
- Assembly
- GCA_029963805.1
- Location
- JAPWTK010000075.1:904558-912204[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.6e-06 0.00048 20.6 0.0 17 38 1 22 1 25 0.91 2 2 6.7 2e+03 -0.6 0.3 6 18 95 109 92 111 0.74
Sequence Information
- Coding Sequence
- ATGGGTGTAAACCAAGATGCTCGAGAATTCGGAATTCCGAAATCAACCCTGAAAGATAGGATTAGGAAGCCTGATATAACAGAACATAACAGACTTGGTCCATCATCTTGCTTAGGAAAGGATGCAGAATTAAAATTGGAGCGACACATAAGAAAATGCAAACTTTTTGGATTTGCAATTGAAGGTGGTGACGCCACGCCAGGCCACGCCCCGCCCCCCGGCGCGGTCGCATCGGGGAAGCTCGGCCCGCGCCACCACTGCGATGCACCGCTCGACGGCgtcgcggcggcggcggcggcggtggcGGAGTCGCCGGGAGCGCTCAGCTCTCGCGGCGTCGGATCGAGACGCTAG
- Protein Sequence
- MGVNQDAREFGIPKSTLKDRIRKPDITEHNRLGPSSCLGKDAELKLERHIRKCKLFGFAIEGGDATPGHAPPPGAVASGKLGPRHHCDAPLDGVAAAAAAVAESPGALSSRGVGSRR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -