Amos010467.1
Basic Information
- Insect
- Aromia moschata
- Gene Symbol
- -
- Assembly
- GCA_029963805.1
- Location
- JAPWTK010000056.1:1106775-1119884[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.9e-07 0.00026 21.4 0.1 19 43 1 25 1 26 0.90 2 2 6.7 1.9e+03 -0.6 0.0 18 26 220 228 220 229 0.95
Sequence Information
- Coding Sequence
- ATGCGCCAAGCTTCTGTGCAGTATGGAGTGCCTTATAGCACTATTCAGAGGCGATTTCACGGAACACATTCCCTTAAATATGGGCGTCAACTAGTGCTTTCACGTCTGAAAGCACTAGTTGAACAAGAAGATCGTATTAAAACATCACTTCAGTTATGCGCAGAATGGGGATTTCCTTTAAAATCAAATGATGTCAGGGGAGTTGTGCAACAATATCTCAATAAGATAGGGGTAACTGAAAGGAGATTCAAAGACAATCTTCCAGGTCTTGACTGGTTTAAATCATTTATGAAAAGACACCCGGAATTAACCATAAAATTGGCAGAGAACACTAAGCGGGTCAGGGCTGGATTAAGCTATGAGATGATACAAGAATATTTCCAGCATCTAGAGAAATCCATAGCAAACATTCCTCCGttcaatataataaattatgacGAAACGAATTTTGCGGATGACCCAGGATCCGTAAAAGTGGTTACAAAAAGAGGCGCTAAACACACTCATAGGACAATTGACTCTTCGAAAAGTAGCACCACTGTAATGTTTGCTGTAGCAGCAGATGGAACTCTATTACCGCCATACGTTGTGTACAAAGCGAAACATTCTTATGAAGGTTGGACCCAAGGAGGGATCGAAGGTTCTAGATATAACCGGTCTGTTTCCAAGGCATGCGGCATTTATCCATTGGACCCTAATAAAGTTCTTAATAAAATCCCACGAAATAATCCAGCAAACGAAACTGACCATAATGAACAAGCATGGACCCAAGCAATGATTGAACACTTAGATAGATTAAAAGCTTCGACGGCAACTGCGGTAAAAAGAGTGCGCCCGTCAACCTCGAATGTGCGCGAGTCCACTCCGCCCCCGCGTTCACCGCTTATCGCCCGCGAATTGTCGACACCCCCGCGCGCCGCGTCGCCCGTTCCTGGACCGTCTACATCGTCACCATCAGCAGCAGGATTTGTGTCTCCCCGCCGCCCGTCGAGGATCTCCCACCTGCGAGACAGCACCGCTACTGCGCCAAAGTTACGCAACCGGTACGCACCTCTCTCCAATGCTGCAGACGACATGGAGACGGACGATGAAGAGCAGCCCCAGGGGAAGGcgcaacaaaaaagttcctccaaGGTGTCGACTGCAGCAAAGCCAAAGCAGACGACTAAAGCCCCCCCTCCTATAATTTTAACCGGCAGAGCAAAGAGAGGACCCGGCCTACACCAAGCCCTCCTGGAGGAGATAAGAATACACATTAAGAAGGACTTCTACATAAAATACGCGGATAAGACTCATGCCTTTGTGCTGAGGGGGTTACACGGGGAACCGCCGCTTGACGAAATAAAAGATGACCTCGAAGGCCAGGGGGTACCGGTGAAGGAGGTCATGCCGATGAGCAGCACAATCAACCCGCTATATCTCCAAAGAAAAGAGGAGAGGGAGGCCAGGAGGGCAGCCCCGGGGACGACGGCACCTACTACACCTGCCACCACCAGGGAGGCCCCGCCAGCTAATCAAACAGTCCGCGGAGCGGCGCCGCCTCAACCCAGAGCAGCACCAGGACTTGGGGCAGCCAAGCCCGCCGCAGGACCCGCCACAGCATGGAGAAGCGCCGCAGCCGGACGGACAACCCACACCCACCCGCAACAGCGTGGACTGGACGCCACTCCCCCCCCTCGCGATGCAAGGCTGTTAGACAGGCCAGTAAAGAATTTGGCGTACCAAAAACCACTATTCTGGATCGATTTAGTGGAAGAGTACCAGAAAACCCTAGTAAAACTGGACCAGAACCACTCTTTACCCAGAAACGAGAGACAAAGTGCTGACTGGCTGGTCAACATAGCAAAGTGTGGATTTCCGGTGACCAAAGCTGATTTGTTAGACACAATCGAAAAAATATTGAAGGATGAGGGGAATACAACGTTGTTTAAGAAAGGTCGACCTGGGAAAAAGTGGTATTCCAACTTTTTAAGAAGACACCCGGAAATCTCACTTAGACAAGCAGAGGGTATCAACAAAAATTGTCTATTGAATTTGAGATGA
- Protein Sequence
- MRQASVQYGVPYSTIQRRFHGTHSLKYGRQLVLSRLKALVEQEDRIKTSLQLCAEWGFPLKSNDVRGVVQQYLNKIGVTERRFKDNLPGLDWFKSFMKRHPELTIKLAENTKRVRAGLSYEMIQEYFQHLEKSIANIPPFNIINYDETNFADDPGSVKVVTKRGAKHTHRTIDSSKSSTTVMFAVAADGTLLPPYVVYKAKHSYEGWTQGGIEGSRYNRSVSKACGIYPLDPNKVLNKIPRNNPANETDHNEQAWTQAMIEHLDRLKASTATAVKRVRPSTSNVRESTPPPRSPLIARELSTPPRAASPVPGPSTSSPSAAGFVSPRRPSRISHLRDSTATAPKLRNRYAPLSNAADDMETDDEEQPQGKAQQKSSSKVSTAAKPKQTTKAPPPIILTGRAKRGPGLHQALLEEIRIHIKKDFYIKYADKTHAFVLRGLHGEPPLDEIKDDLEGQGVPVKEVMPMSSTINPLYLQRKEEREARRAAPGTTAPTTPATTREAPPANQTVRGAAPPQPRAAPGLGAAKPAAGPATAWRSAAAGRTTHTHPQQRGLDATPPPRDARLLDRPVKNLAYQKPLFWIDLVEEYQKTLVKLDQNHSLPRNERQSADWLVNIAKCGFPVTKADLLDTIEKILKDEGNTTLFKKGRPGKKWYSNFLRRHPEISLRQAEGINKNCLLNLR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -