Amos026214.1
Basic Information
- Insect
- Aromia moschata
- Gene Symbol
- -
- Assembly
- GCA_029963805.1
- Location
- JAPWTK010000708.1:144366-152273[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.8e-11 1.1e-08 35.4 0.0 2 36 16 51 15 56 0.91 2 2 5.1 1.5e+03 -0.2 0.0 19 31 255 267 252 267 0.83
Sequence Information
- Coding Sequence
- ATGCCCAAATTTAAGGGAAGAAATACTAATCGCGGGAACTGGAGTCAAGAGAGCATGAAGAAAGCATGCGACGCAGTTATTTCAGGAAAAATGGGCTTGAGGCAAGCAGCTGTAACATATTCAGTTCCTAAAAGTTCCCTTTTTGATAAAGTAAACGCATTACGAAGTGGCCAAGAAGTCACCCTCGACGCCAAACTTGGACGATTCACTCAAACTTTTAATTCTGAACACGAAACTGCTCTTGTCGACCATGTAAAAGATTTGTCAAGTAGACTGATGCCTTTGTCCAGAAAAGAATTCCTGCAGTTAACTTTTCAACTGGCTGAAAAGTTGAAGATACCACATAGATTTagtaaaacaaagaaaatggCTGGGAAAGACTTCTACCAAGCTTTTATGTCTAGACATCCAGATCTTTCGTTAAGGACTCCTGAATCCACAAGTCTTATGAGATGTGTCGGATTTAATAGACCACAGCCGAGGCCCTGCTGGCAGCACTACAAGCTTAGAGTTTATCGAGTAATGGATTCCGGCGAGGTGTACAGAGAGAGGTTAGCAGATTTCATCATCAGATTAGGAGCATTAAAAGATGAAGTAAGCACACCTCAGTTGGTGTTTGAGTGTGATAAGGGTAGCATGGCACTAAATGCACTCATAAATAAACTCCCCATTGAGATCCACGCCCCCGGAGGGTACAGATTTTGTGGACCTGGAACTAAATTGGAGAAAAGATTAGCACGTGGTGATCGCGGAATTAATGGTCTAGACGAGGCGTGTCGCGAACACGATATTCAGTACTCTAAAGTAAAGGAGGTTGAAGGTAGACACGTTGCCGATAGAGAGCTCGCACGCAAGGCAATTAAACGCGTATTCGCTAAGGACGCATCAATCGGGGAGAAAGCGACAGCACTAGGTGTGGCCGGAATTATGAGTGCTAAGGTTAAACTCGGTATGGGGCTTAAGAAAAAGAAGAAGTCATGCCGTGGCGGTGTGATAACTTTCCGTAAATTACGGAGTAAAATTTATCGTGCTGTACGTCGATCCAGCAGCATTGATGATGCTTTAAAAAAGGCTACTCGTGCTGCAGAGCGCGTTAAGAAACAATCGGATTCAATTAAATTTCCAAGTGCCCGGATTATTCCAATACCAAAGTCGGGTGGTGTTCTCCCCCCTATTACCGATATTTGCAGGACTTAG
- Protein Sequence
- MPKFKGRNTNRGNWSQESMKKACDAVISGKMGLRQAAVTYSVPKSSLFDKVNALRSGQEVTLDAKLGRFTQTFNSEHETALVDHVKDLSSRLMPLSRKEFLQLTFQLAEKLKIPHRFSKTKKMAGKDFYQAFMSRHPDLSLRTPESTSLMRCVGFNRPQPRPCWQHYKLRVYRVMDSGEVYRERLADFIIRLGALKDEVSTPQLVFECDKGSMALNALINKLPIEIHAPGGYRFCGPGTKLEKRLARGDRGINGLDEACREHDIQYSKVKEVEGRHVADRELARKAIKRVFAKDASIGEKATALGVAGIMSAKVKLGMGLKKKKKSCRGGVITFRKLRSKIYRAVRRSSSIDDALKKATRAAERVKKQSDSIKFPSARIIPIPKSGGVLPPITDICRT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -