Basic Information

Gene Symbol
ct
Assembly
GCA_029963805.1
Location
JAPWTK010000033.1:1777487-1821864[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 1.1e-27 1.7e-23 83.2 0.0 2 75 317 391 316 394 0.95
2 4 1.4 2.3e+04 -3.7 0.0 36 55 416 435 414 441 0.80
3 4 4.1e-32 6.4e-28 97.4 0.0 3 76 703 777 701 780 0.95
4 4 9.4e-31 1.5e-26 93.0 0.0 3 75 913 986 911 990 0.95

Sequence Information

Coding Sequence
ATGAAATTGACGGCAAAACCGATAGCACCAATTTTTCCGAAACTATGCAGGGAAACCCTCGCGATGTCGCCTGTCGCCGTCTCTGTCGCGCCTTCGCCGACGAGAGAGACGGAAATAAACCAGCTGTTAGAAGAAGTCCAGAGGCTCCAGGGATGCATAGCGAAGCTGCAGGAGTCTTCCATGTCGCAGATCACTAGGCTGGAGGACCAGCTGGAACAGAAGCGACAACACATCCTGCGGCTGGAGAGCAAGTTGGACTCCCAGAAAGATTACGATGACCTGAAGCGCGAAGTCAGTATACTGAGGTCCGATCTTACCAACAATCCGGATGGGAAAAATATCGAATTGCTGCTGGAAAAAACGAAGAGCTTAGCGCAGGAAAACAGGGATAAATCGCCTTCCAGGGAGACAGAAGGGGTTGAGCAACTTCCGACGCAACCCCCCACCCTCTCGGTCACCCCGCCCAACAGTCTCCCGCCCCCCTTCCAGAACGTCGACGCGTTCGGCAGCCTGCTCGGCGAGGAGATCGTCTCCTCATGGGCCGGCGAAGAGCACCACCCCCTGACCGCCGACTCGGTGCCGGAGAAGAGCGCCGCCTCCACGCCGCAGCCGTCGGAGCAGACGCGCCAGCCCTCGCCCGTCGACAACCTGGTGAACGGCAACCCGAAGAGCCCCCAGGAGGACAACAACAACCACCACGTCAGCAACAACAACATTCCCCTCACCACGGCCACTATGTGCGCGGTGAACAACTTCCTGCGCAACGACGAGGCGCTGAAGAGCCCCTACAGGTTCGACGAGCACCGCTCGCCCTTCAAGTTCGCCGAGGAGCTGGGCATGGCGCCGGGTTCCATGGTGGGCAGACTCGGCGAGAGCCTCATCCCGAAGGGGGATCCCATGGAGGCCAGGCTGCAGGAGATGCTGAGGTACAACATGGACAAGTACGCGTCGCAGAATCTAGACACTCTCCACATATCGCGGAGGGTCAGGGAACTCCTCTCGATCCACAATATCGGCCAGAGGCTGTTCGCCAAGTACATCCTGGGTCTGTCTCAGGGTACGGTGTCGGAGCTGCTGTCGAAACCGAAACCGTGGGATAAACTCACCGAAAAGGGCCGAGACAGCTACAGGAAGATGCACGCGTGGGCCTGCGACGAGAACGCCATCTTGATGCTCAAATCTCTGATACCAAAGAAAGGCAAATCGGAGGGCGTGCCTACGTTCGGCCGGCCCGACAGCGACCTCACCGAAGAGAGGCTCGCCCACATCCTCAGCGAGGCCAACCAGTTCCAGCAGATCAAGCAGCAACACCATCACCAACAGCAGCACCAGCAGCAACAACAGCAGCAGCCGGAAGACACGCACAGCAACGAGGACTCGAAATCGCCCCACGGCTGCGGCAGTCCCTTCTCCAGGGACTCCTCGCTGAACAAGAGACTGAAGAAATACGAGAACGACGACATATCCCAGGAGAAGGTCGTCAGGATATACCAGGAGGAGCTGGCCAAGCTGATGGGGGGAAGATTCGAGGACATGCGCAATCCGCGCGAAGGCGGATTCCCCGGTATCTTCTTGCCGCAACTGTTTAGCAACCCGATGGACAGGACGCAAGACATCCGCATAGCCTTGGAGGCGTATCACCGCGAGCTGGCCAAGCTCAACCAGGGCCAGGCGCCTGCTCAGATGCCTCTGAATCTGCTGGCCATCCAACAGCAAGCCTTGGCCCACCATcaacagcagcagcagcagcaccAGCAGCAGAATGCCAGCTCGAACGGGGGCGTCCAGGACTTGTCCATACCGAAGGACAAGATGAAGATGATGAATGGGGTGATGGACGACAAGGACAAGGACGACGACGCCATCTCGCGACACTCGGGGGTCTGCCTTCAGCCTGCGTCGAGTCCCCTGGGCAACGCCATTTTGCCGCCGATGACTCCGACGGACGACTTCACGGCCTCGGCGGCCGCCTCGCCGCTTCAACGGATGGCGAGTATCACAAACTCGCTTATATCGCAGCCTCCGTCGCAGCCGCATCACTCCTCGAACAACAGGCCCCTGAAGGCGGTGCTGCCGCCCATTACTCAACAGCAGTTCGACCTCTACAACAACCTCAACACCGAGGATATAGTTAAGAAGGTCAAGGAACAGCTCAGCCAGTACTCGATAAGCCAGAGGCTCTTCGGCGAGAGCGTGCTGGGATTATCACAGGGTTCGGTCAGTGACCTCCTGGCGAGACCGAAGCCCTGGCACATGTTAACGCAGAAAGGCAGAGAGCCCTTCATCAGAATGAAGATGTTCTTGGAAGACGACGCCGCAGTACACAAACTAGTGGCGAGCCAGTACAAGATAGCGCCGGAAAAACTGATGCGGACTGGAGGATACGGCGGTGCGTGCTCCTCCATCGGTAAGCCTATGCCGCCGACCACCAAGATGCTGTCCGAGGCGGCCGGTCTGCTCAACAAGATGCAGGAGTCCCAGAACATCTTGCCGCCCTCGCTGCAGCTGGGACCGCCGCAGAGCGCCAATCCGCAGCCGCCGCCACCGATGCTGCTGACTCCACCCGTCGCGTTGCCGCCTCACCACGCCATGAGCCTGCAGAACGCCGACCTGCTGAAGAAGTCTAACCAGAGCCCGCACGGCATCCCGCACTCCCCGATGGCGCAGCAACACGCCTCCCTCAGGAACATGCACCAGCACATGTCGCCCAGCGTGTACGAGATGGCGGCGCTCACGCAGGACCTGGACACGCAGGTGATCACCACCAAGATCAAGGAGGCCTTGTTGGCGAACAACATCGGTCAAAAGATATTCGGCGAAGCTGTTCTAGGCCTCTCCCAGGGATCCGTCAGTGAGCTCCTGTCCAAACCGAAACCGTGGCACATGCTCAGCATCAAGGGTAGAGAACCCTTCATCCGGATGCAGCTGTGGCTGAACGACGCCCACAACGTCGACAGATTGCAAGCCTTGAAGAACGAAAGGCGCGAGGCGAACAAAAGAAGGCGCTCTTCGGGTGCAGGCGCGCACGACAACAGCAGCGATACTTCCTCCAACGACACGTCGGAGTTCTACCACTCGAACTCGCCCGGACCCGGGCCCCCATCCGCCAAAAAGCAGCGGGTCCTCTTCAGCGAGGAGCAGAAGGAGGCCTTGAGGCTCGCCTTCGCTTTGGACCCCTATCCCAACGTGGCCACCATCGAGTTCCTGGCCGGGGAGCTCGGCTTATCTTCCAGGACCATCACGAACTGGTTCCACAACCACAGGATGAGGCTGAAGCAGCAGGTGCCGCACGGTATGACCTCGGACTTGCCGCCCAGAGATCAGACCGGCGGCCAACAGCCTTTCGACCCCGTTCAGTTCAGATTGCTGTTAAACCAAAGACTACTCGAACTGTCCAAGGAGAGGATGGGTCTGAGCGGGGTGCCGCTCCCCTATCCGCCGTATCTGGCCGCCAACACGAACCTAGCCGCCTTGATCAGTCGCGGTTTGTTGCCCGCAAGCGACATGGACCTGTCGGCGCTGAACAACGTTGTTAAGGAGCAGATGAGCGGCCTGGACCTCTCGATGACTTCCCTGAAACGAGAACCCGGCGACTTTGACGACGAAGACGACGTTGAGAGCAATGTGGGGTCGGAGGACTCCAACATGTCGGGCGGCAGCCTGCACGGGGAAGTGAAAGTGGAACCCAAGGAGCGCCCCAGTGGGTCAACCCCAACTGGGAGGAGGAGAAGGGAGAAGCAGAACGCGGCAGGCGACGAGGTAATAATCAACGGGGTGTGCGTGATGCAGACCGGGGACGACTACGGCAGGAGGGGCTCCGAGGAGACCGTCCGCGTGGAGCCGCAGGCGGTGATGGACAGATTCGACGACGACCAGAGCGACGCCTCCTCCGTGAGCAACGACAACGGACAGCACGATAAGAGTGACGGGAAGTGCGAAGAGGAGCAGGAGAACAACGAAGAGGGCGAATTAAAGAACGAGGACAGTGAGAGTAAAGTTGTTAAGCAGGAGAACGAGGAGGAGAGGTGGGAATACTGA
Protein Sequence
MKLTAKPIAPIFPKLCRETLAMSPVAVSVAPSPTRETEINQLLEEVQRLQGCIAKLQESSMSQITRLEDQLEQKRQHILRLESKLDSQKDYDDLKREVSILRSDLTNNPDGKNIELLLEKTKSLAQENRDKSPSRETEGVEQLPTQPPTLSVTPPNSLPPPFQNVDAFGSLLGEEIVSSWAGEEHHPLTADSVPEKSAASTPQPSEQTRQPSPVDNLVNGNPKSPQEDNNNHHVSNNNIPLTTATMCAVNNFLRNDEALKSPYRFDEHRSPFKFAEELGMAPGSMVGRLGESLIPKGDPMEARLQEMLRYNMDKYASQNLDTLHISRRVRELLSIHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDENAILMLKSLIPKKGKSEGVPTFGRPDSDLTEERLAHILSEANQFQQIKQQHHHQQQHQQQQQQQPEDTHSNEDSKSPHGCGSPFSRDSSLNKRLKKYENDDISQEKVVRIYQEELAKLMGGRFEDMRNPREGGFPGIFLPQLFSNPMDRTQDIRIALEAYHRELAKLNQGQAPAQMPLNLLAIQQQALAHHQQQQQQHQQQNASSNGGVQDLSIPKDKMKMMNGVMDDKDKDDDAISRHSGVCLQPASSPLGNAILPPMTPTDDFTASAAASPLQRMASITNSLISQPPSQPHHSSNNRPLKAVLPPITQQQFDLYNNLNTEDIVKKVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDAAVHKLVASQYKIAPEKLMRTGGYGGACSSIGKPMPPTTKMLSEAAGLLNKMQESQNILPPSLQLGPPQSANPQPPPPMLLTPPVALPPHHAMSLQNADLLKKSNQSPHGIPHSPMAQQHASLRNMHQHMSPSVYEMAALTQDLDTQVITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLNDAHNVDRLQALKNERREANKRRRSSGAGAHDNSSDTSSNDTSEFYHSNSPGPGPPSAKKQRVLFSEEQKEALRLAFALDPYPNVATIEFLAGELGLSSRTITNWFHNHRMRLKQQVPHGMTSDLPPRDQTGGQQPFDPVQFRLLLNQRLLELSKERMGLSGVPLPYPPYLAANTNLAALISRGLLPASDMDLSALNNVVKEQMSGLDLSMTSLKREPGDFDDEDDVESNVGSEDSNMSGGSLHGEVKVEPKERPSGSTPTGRRRREKQNAAGDEVIINGVCVMQTGDDYGRRGSEETVRVEPQAVMDRFDDDQSDASSVSNDNGQHDKSDGKCEEEQENNEEGELKNEDSESKVVKQENEEERWEY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01368896;
90% Identity
iTF_00165934;
80% Identity
iTF_00165934;