Amos001938.1
Basic Information
- Insect
- Aromia moschata
- Gene Symbol
- ARID5B_1
- Assembly
- GCA_029963805.1
- Location
- JAPWTK010000005.1:3887049-3895310[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3 5.3e+03 -1.3 0.0 32 50 60 78 59 96 0.82 2 2 4.2e-25 1.7e-21 77.2 0.0 1 89 168 254 168 254 0.94
Sequence Information
- Coding Sequence
- ATGCTCGCCAGGCAACGTGTTTACGTTTCGGCCGCGCAGATCGTACCTACTCCACACCACGAGGCGGCGGCTGTACAGCatACCTGCAGGGAAGCCACAGGCCCACATGTGATAATACTGAGTTTTCCGAAATACTGCCGATACAGGGCCATGATGAAGAGATTGGAAGGcgtcgaaaatttgtatttgaaatACAAAATCGTCAACGCTCTCGGTGGTTTCTACGTGATCAATCCAAATACGAGAGTGCTTTTCTGCAAAGAAACCTTCGACTATCCCGAACTGGAAGGACACGAGCTACTTTGCAACCATCTCGCGCCAAAACTGAAGGGTAGACCGAGAGGAAAACGGAAAAAACGGAGTATTTCCCCCGGCTCGGAGAGCAATGAGTCGGAGTCCTCGGTCTCAAACAGTTATAATACGAGAgcagaaaataaaaatggtcTCCGCTGCGAATCTGGAATCACACCACGTCGTAGTACTCGATGCCACGAGAATAATGAAAACAAAGAATTTGTTCGTCAACTCACTGTTTTTATGAAGTCTCATCACACCCCCATAGGCCGAATTCCGTCCTTAGGCTACAAAGAATTAAATCTTCATGAATTCTTCacaaaagtacaaaaattagGAGGTTACGATGCTGTAACTACTAATCGTTTATGGAAGTCGATATTTGATGACATGAGTGGTCACCAAAACAGTACAAGTGCTGCCACAGTGATAAGACGTCATTACGAAAGATTTCTATTGTCATATGAGAGATACATCAAAGGAGAAGAGTACAAACCGTTGCCTGTGTCGGAAAGGCGAAGACTGAAAAGCAAACGGGGAAGTAGCAGCATTAGTGATGCTGATTCTAGCAGCGGAGATGCAACCCCAACACCTTCAACTTCCAGAAAGACTTCCTTTTCAGGAACTTCAGCAGACTCTAAGGAAAATTCTAAGATGGAAGGAAAACCATCGTCTCTTAGAAGTGTACGGGTTAAGTCAGAAAGACAAAAGGACAAGCCAGCTGGTAGCGAAAAAGGCAGTGTTGAaaacaacaataacaataacattgAAAAACAGACTAACGACAAGAAAGAAACTGAAGATATTAAATCAACAGAAATCAAGCCCAAGATTGAGAAATTGATAATTAAAACAGAAACCCTGAAGACACAAATGGATTGTGCTTTCTTCAAAACAGAATATCCTATTGTTAAATCAGAAAGCATATCTGTTGAAATGAAAGCCGAAATTATCCCAATAAATTCTGATATGAAACATGTACAGGAAGATATTTCTTCCACAAAGGCTGAAATTTTGCCGATTGATCCTGTAAAACAAGAAACTGAAGATGCTAAAGCAGAGGTCATAGCCATAAAAACAGAAAGCACAAAAATCCCAGAGAAGAATGCTGAGCCTCTAACTTCTGCTGCTACACCTGTTCCACAAAAAGTTTCACCAGATCAGATGATGTCTCCCATAGaaggaaaagaaaatattcccGTTATAAAAACAGGAGATGTTGCTACAAAAAACAGCCCTGAAGTTATAGAGGTGCCATACAAACCAAAATTACCAGAAGCTGTAAACGTAGAACCAGACACATATAAGAGTACATTTATACATGAGGTTAAAAAACGAAAACTTGACATATTAAAAAGAAGGCGGTCTAGAGGTAACGCCAttcacACACCTAAATTTATCAGCTCTATGCCAAGACAAAATGGCGGTGATCCCGTAGATCTCTCTGTAAATAGCCCGCAGAAACCAGTAGTAGAAATAATGCGTATTCCTCAAACTCCATCTTCGAGCACACAGAGTCCATACAATAGAGATACTGTGAcaaaaaatctttataaaaCCACCTCAAGTTCGATAATGGATGGAAGACGATTGGGTCCAAATCTAGAGATAACCTTGGTGGGTCCAAACAGTAAGAGTTCTCTTCCTAACCTCAAACAGTTCAACTTTCCGTCTCCACGTGTACCCAGCCCTCATACGAGTAGCCAATTTCAACAACAGAAACGGTTTTCAAACGATTATTACACTGCGAATAAAAGCGCAAAAGGCGATGAAAATGGAAGATACAACAAGCATGTTATTCCTCCCTCCTATAGGGACACTAAACCTAGTGTAGATATCAGTATTCCAAATCCGTTTACAAGTAAAAATTCGAGCATTAAGCACGATCCCGTAAAGCAGATGTCCCACAATCAGTCAGTGAAACCCTTCCAAGCTCCTGGTTTTCCTGCTTTTCCGCCATATTTGTCGCAGCTGTATGAGGGCAACAAGAGTATTCCTCCGTATCTTCCAATAATAGATCCTGCGATGTATTACTCAGCCGCAATGCAAAGCCTGTATTCCAACACTATGAACTCGGCCCCGCCAATTTTGCAGCTTCCGACACCCGAGCAGCTTAAGTTTTATACAGAACTGATGGCGCACGGAAGATTTAACTTCCCCTTTCAGATGCCTCAAGATGGTAATCCGTCTGCGGTTAACAGTAACAACTTGAAAAAACCATAA
- Protein Sequence
- MLARQRVYVSAAQIVPTPHHEAAAVQHTCREATGPHVIILSFPKYCRYRAMMKRLEGVENLYLKYKIVNALGGFYVINPNTRVLFCKETFDYPELEGHELLCNHLAPKLKGRPRGKRKKRSISPGSESNESESSVSNSYNTRAENKNGLRCESGITPRRSTRCHENNENKEFVRQLTVFMKSHHTPIGRIPSLGYKELNLHEFFTKVQKLGGYDAVTTNRLWKSIFDDMSGHQNSTSAATVIRRHYERFLLSYERYIKGEEYKPLPVSERRRLKSKRGSSSISDADSSSGDATPTPSTSRKTSFSGTSADSKENSKMEGKPSSLRSVRVKSERQKDKPAGSEKGSVENNNNNNIEKQTNDKKETEDIKSTEIKPKIEKLIIKTETLKTQMDCAFFKTEYPIVKSESISVEMKAEIIPINSDMKHVQEDISSTKAEILPIDPVKQETEDAKAEVIAIKTESTKIPEKNAEPLTSAATPVPQKVSPDQMMSPIEGKENIPVIKTGDVATKNSPEVIEVPYKPKLPEAVNVEPDTYKSTFIHEVKKRKLDILKRRRSRGNAIHTPKFISSMPRQNGGDPVDLSVNSPQKPVVEIMRIPQTPSSSTQSPYNRDTVTKNLYKTTSSSIMDGRRLGPNLEITLVGPNSKSSLPNLKQFNFPSPRVPSPHTSSQFQQQKRFSNDYYTANKSAKGDENGRYNKHVIPPSYRDTKPSVDISIPNPFTSKNSSIKHDPVKQMSHNQSVKPFQAPGFPAFPPYLSQLYEGNKSIPPYLPIIDPAMYYSAAMQSLYSNTMNSAPPILQLPTPEQLKFYTELMAHGRFNFPFQMPQDGNPSAVNSNNLKKP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -