Basic Information

Insect: Arma custos
Gene Symbol: -
Assembly: GCA_037127475.1
Location: CM073762.1:96925584-96936784[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.00036 0.077 15.5 1.7 2 23 621 644 620 644 0.93

2 16 0.015 3.3 10.3 2.5 2 22 738 758 738 761 0.90

3 16 0.26 56 6.5 1.6 1 23 821 845 821 845 0.97

4 16 0.00071 0.15 14.5 1.0 1 19 904 922 904 924 0.97

5 16 0.04 8.6 9.1 0.3 3 23 975 996 973 996 0.94

6 16 0.00092 0.2 14.2 2.6 1 23 1028 1050 1028 1050 0.98

7 16 0.99 2.1e+02 4.6 4.3 1 23 1054 1076 1054 1076 0.92

8 16 0.11 23 7.7 4.8 3 21 1087 1105 1086 1106 0.95

9 16 0.00096 0.21 14.1 1.7 1 23 1116 1139 1116 1139 0.96

10 16 0.0043 0.92 12.1 0.2 2 20 1194 1212 1193 1216 0.93

11 16 0.0026 0.56 12.8 1.3 2 21 1249 1268 1248 1269 0.94

12 16 0.059 13 8.5 1.2 2 21 1393 1412 1392 1413 0.94

13 16 2.6 5.6e+02 3.3 0.0 2 19 1501 1518 1501 1520 0.88

14 16 2 4.3e+02 3.7 0.7 2 12 1534 1544 1533 1549 0.85

15 16 0.0014 0.3 13.6 1.4 3 23 1588 1608 1587 1608 0.97

16 16 0.0011 0.23 14.0 4.2 2 23 1684 1705 1683 1705 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.00036	0.077	15.5	1.7	2	23	621	644	620	644	0.93
2	16	0.015	3.3	10.3	2.5	2	22	738	758	738	761	0.90
3	16	0.26	56	6.5	1.6	1	23	821	845	821	845	0.97
4	16	0.00071	0.15	14.5	1.0	1	19	904	922	904	924	0.97
5	16	0.04	8.6	9.1	0.3	3	23	975	996	973	996	0.94
6	16	0.00092	0.2	14.2	2.6	1	23	1028	1050	1028	1050	0.98
7	16	0.99	2.1e+02	4.6	4.3	1	23	1054	1076	1054	1076	0.92
8	16	0.11	23	7.7	4.8	3	21	1087	1105	1086	1106	0.95
9	16	0.00096	0.21	14.1	1.7	1	23	1116	1139	1116	1139	0.96
10	16	0.0043	0.92	12.1	0.2	2	20	1194	1212	1193	1216	0.93
11	16	0.0026	0.56	12.8	1.3	2	21	1249	1268	1248	1269	0.94
12	16	0.059	13	8.5	1.2	2	21	1393	1412	1392	1413	0.94
13	16	2.6	5.6e+02	3.3	0.0	2	19	1501	1518	1501	1520	0.88
14	16	2	4.3e+02	3.7	0.7	2	12	1534	1544	1533	1549	0.85
15	16	0.0014	0.3	13.6	1.4	3	23	1588	1608	1587	1608	0.97
16	16	0.0011	0.23	14.0	4.2	2	23	1684	1705	1683	1705	0.97

Sequence Information

Coding Sequence: ATGGAAGTTCGTAAAAATGTAAACGGAGCTTGTCGACTCTGTCTTCATGGAGATGGAAAAATATCAGTTTTTGAAGAAAGTTCAAAATGTTCCATATCACCTGAGAGTATATATGATTGTGTATCAATTAAGATAACCAAAGAGGACAAATTACCCAAAGGCATCTGTGAAAACTGTTTATCTAGTGTTAAAAATTGGTGTGTATTCAAAGATACCTGCAACAAAACACAAGATACTTTAAACGAATGGCTAAATTGTAATGGGCTCAGTGATGATGTCAAAgagGTTGAAGTTGGCATATCAAAGAACTTGTTTAATAGTACAACTGTTAAACCTTTTGAAGTAAATAATGGGAGTGAAAATTCTGTTCTTCCAGTCACTGCATTACCTGAAGTGGAGGAATCAGGTATATGCCTTGATgaaaacaagaaacatattCTGGAAGAAAGAACAGGGGAAATTTCAAGCACCTTATGTACTGAGGAAGAGAATAAGCAATCATCAGTTGTCAGCTCGACTAAAGATATTGCAGATTCTTGCCAAGCTAATGATGGAACCAGTTTAAACGATAAAATGGATGTTGAAACTGATGAATCTCATAATACTCCTAAAGGCTTCCTAAGGACGACTGAATCAGTTATGGAGTTGTGCAATGAATTACAAGAAACAATTCTGAAGAAAGGTGTGCCTAATTCTGTTGAGCTAATGGAAGTAACTTCCAATAATGTAGACCACACTTTGCCAAAAATTACTCAGCCGACGAAACTTAATAACTCATCTTGCGATGAGATAAGCGATTGCTTTTCAGCTATAAATAGTTCTGTTGATGCAGTAGAGGCGATCTTGCAAAGTTCTTCTGACAcagagaaagaaaataataaggcTTCTGACAACTCCAACTCAGACTCGATGGATACAGAGAATTTGACATGCTCTCAGAGTGGATCGGAGCCTGTTAGTGATTCAGAAGCAAACAAGTGTTTAGATGTTAGGTTGAAGGAAAATGCTGCCATAATTGAGGCTTCTCCATCCAATAAAGATCCGAGTGCAACAACGGAATCTCTAGATTCTGCAGCCAATGCTGGTGAGGATAATAGGACTAAATTATCAGAAAGCAAAGTCATTCCTGATACTACAACGGAACCTGAACCGAACAAGAACGAGGCACCGAGGAACGATTCTTCTCTCGATTCAGACAAAGAAAATTCTACTCCTAACTCTGTTACTTCAGCCACTGACGTTTCTAAAGAAAAGCAGAAAGGTCCAGAATCACATGAAACATCAGTAGAAGGAGAAAATCAATCACTTTCTGGTTTAAAAATCGAATCCATTTCGACTTTAATCGAAACTTCAGACTTTTTCAGTTCTCAAGAGGGTCAGAAGACAACTTctgaaaataatactaattcAGAGACTGTTGAAAAAACTGCAAAAACTAATACCGACTCGGCTGAATGTTCTAACTCAGCCGTGCAGGGTTCTAGTTCAGGAAACGAAAGTGAAGAAAGTGTACCTATAGAGGTGCAATCTTCAGAACCCGAGGTTGTCTCCGAACAATTTAGCAATCCGTCATCCGTACAAGATACTATCACAGATGAAGACAGGTCTGAAATTAATGTCAATGAGCACCTAGAAGTACAGATGAATACCAATAGTAGGACTGATGGTGAGCCGGACATAGTGTTTTCACAGCAGATGGTGCAAAACATCAAACAAGAACCAATAGATACTCATGAAACAATGCCTTCAGACCAACCCATATTCCCTATCAGGGTAAAATCTGAATTTAGCTCCTATGACTTCGATGATGGTGGCGTTGATATGGGAAGTCATCCTTCTATCTCAGGACAAGAGACTAATAAATGCAGTATTTGTAATCGGAAATATTCTTCTTTATCAAATTATCTGAAACATCTCCAAACTAAAGTTCATTTGTACAATGCTTCTTTAGATCCCTCAGAAAACATGTCATTACCTAATGAAGGTATGGCGCCTGATCATATCGATTCTAGAATGAATTATTCAGATTCGTTTTCGGAGGATTCCAGACTCAGTGGATATTCCAACGACTCTCCTATGCTACGGTCTAGGCTCTGTTCTGAGGATTTCATGCCGCCTTCAATAAATAAGCATCAACATTCTATGGTTCGCCAGGCGCAGCCTAGATTACCTTATCCTACTTCTCTATGTAAATTTCCTAGGAGAAAAGAAAAGTGTAAGTTATGTAATACCAAATTCACATACATATCAGAAATGAGGAGGCATTTACTTTCTAAAAAGCATAAAAGTAATGAACGTTTGATGCGAGATAATGACATTATGATGAGAGAAAATGATCGAATGATAAGGATAACTGAACAGATGATGAGGGAAAAAGAAAGAAGCATGAGAGAAAGGGCTATGATGTAtcctaaaaaagaagaaacaccACCATTACAATCAGAAAAGAATCCGTCACTGTTCATATGTCCTATTGAAGATTGCCATTATTCTTGTCAGAAAGGAGTACGGCTGTTGGCTCACATGAAAACGCACGGAATCGGACAGCCTCCTGCGGCACCCTCGCTCCAAGTCACAAAGGAGCTCGAAAGTGCCGGAGCTAAGCCTAAATTAAGTCTGAGGCAGCAGGAATTACTAAAAAAAGAGTTAGATAAACGGAAAGCTAATGCTTTGAGTGAACAAATGACTGTGGAACCATTGGTTCATGTTTACAAATGTGACGGTTGTAGTAAGGCATTCTTCCGGGAGAGTGGTCTTAAGAAGCATAGCTACTATTGTTCTGCAGTTATCGCTAACCAGCAAGAGTATGAAGATGATGacgaagaagaagaggaagaggaagaagagGAGGAAGAGGATGAAGAAATACCTTCTAAGTTATCTGACAATATCTCCAATAGCTTACAAATGAAGAAGATGCATTGCCCGATCTGTAATCTGACATTTGCTGCTAAAAGTGTGTTCATCAGTCACGTCCAGATTTATCACAAAGGATCTGCATTGGAGAGTGGACTCTTTAGACCAAAGAAGACAGTTATCACGTCAAATAAATTACGTGTCAAAAGCAGAAAAGGACATGGCTACGTGTGCAATCATTGCGGCAAAAAGTTCAATCTGTTATCATCTTTGAATTTTCATTTGAAAGTTCATAGCACCAaacatatttgtaaaatttgtaaGAAAGGATACGACTCACGTAGGGCTTTTATGGACCATTGTCGGCTCCATTTCTTACCACCTGGTTCGAAGCAGACCTTATGCCACAAGTGTTTTAGGGTCTTCAAGACTAGAGCGGAGTTTGCACACCATAGAAAGCATGATATGTGCTCTATcaaactgaaaatatatacTTGTAATATTTGTCAGCATTCGTTCAAAGACCCTACAGCTTTAGACGAACATAAATTAAGGTTTCATAATGATGCACTCGATGTATTGGATGATGAACCTCCGCCTGTCGATCGCAGGCAAATGGTAGATTTTGACACTGGTAATGAAAACCGCCCTGGGACATCGGCAAAATCTCACTCTTCTTACTTAAATCAGCCTTCTAATTCAGCAAAAACCGATCCGTTTTTGTATTGTGATGTTTGTGACAGGGACTATGCCACTTTAGCTTCACTCAAAAAACACATGTGGAAGTATCATCAGACAAAGCCAGCATTGGCACGCCAGTTAGAACTCgctaagaaaaataatgttctTAAAGCTAATGTTCTTAAGGCTAATGTTTCTAAATGTTGGAAATGTAAACATTGTAGAAGGGTCTTTGACACTAGAAGAATGCTTGTTGTCCATTTGAAAAAGTGCAAATATAATGTTTTCGGTTTAGAGGATGGAATGTGTTTGCAATGTGGAAAATGGTGCGAATCGGGGAAATCTAGAATCTGTAGGTTTTGCCTCCCAGACCTGAAGAAAATTCCAAAGCCCAAAAAAAGTTTACCCGAACCAAACTTCTTGATGACGCCCAAGTCAGAAATGATGATTAAACAAGAAGTGAATTCAGCTCCTGCCAGAATACTCAATCCTGCTTTTCCAAGTACTTTGCCTAAAATCAAAAAGCCTCCACCGATAAAGGGAATACGACTTATGAAGTGCCCAGTCGGTAGCAAGTACTTTAGAAGTGAGCTATTAATGATCAAGCATTACTCTCAGTGCGATGGCAGCTGTGAGAATCGTTGTAGTCATTGCAGGAAACTTTTCAATTCGGCTAAAGAGTACAGggttcatttattaaacagcAACTGCTATGGGCACAGTAGAGGTAAAACCAAAACTCCCACCAAGTCACCTTTGAAACAGGTAAACACCTTCTCGGTATCGAATTATCCGGAGCTTGAGTCTTTTGTTCCAAAGAGCAATGACGCAGAAGTGCCTGGTGAAGTGAGCTTGATAGATAGTAGCATTTCTGATGAAAATAGTATGATGGGAATGGACTCGTCAATGTTGAACGAATCTTCTAATAAAGTGGATGAAGAAAAATCGATAAAAATTGGAAGGGTTTGCACGATTTGTAACAAAGTTATAACTATGCAAAGAGGTGTCTATCGTCACGTTTACGGTTGCTTTAAAATCAACATGCTTACTCAAGAAAGTGTGTCATGTAAAAAATGCAGTAGAACATTCAGTAAGCATTTGTCCATGAAGGAAAACACTGCTACCATCAAGCAACACATACTCGATTGCCATTATATACCATATTATCAAGGAGAAGGGCTTCTAGAAGACGGAAGTCCTTCTGAAGTCCCTCCACCGATATTGTGCTATGTATGTTCTTTTGGCTTTTCGAACCATGATAATCTCAGGCGACACATTCTGGAGCACAGGTCCAAGAAAGATGAAGTTAACAACATCGTTCTCCTTCTAGAAGCCGAAATGGTGTCTGAAAAAAGATTGAATTCCGGAATGATTTCCTATAACATTCAGATACAGCCAGAAAGCACCGAAACTTTATCTTCTCTCCCTGTGAGGAAGAATAATGTATTGCGCTTCAAGGTTCCCGGAGTGCACAGTTTAGAATCGCGAAAAGTTATAAGAAAAAAGCTCCTGCAATGCGAGAAGTGCAACAGAAAGTTTACAAACCGCAATAAATTTTTAAGGCATAAGAAAGTTCATGGTATTGTTACACAAAGTGTGTTCCATGAGGTttcagaaaattatataaattttattactgaccATGCACAACAACAAGCTCCGCCTTCTACACCTCCACTAGAACCAATGCCACCTCCACCAACcactaattaa
Protein Sequence: MEVRKNVNGACRLCLHGDGKISVFEESSKCSISPESIYDCVSIKITKEDKLPKGICENCLSSVKNWCVFKDTCNKTQDTLNEWLNCNGLSDDVKEVEVGISKNLFNSTTVKPFEVNNGSENSVLPVTALPEVEESGICLDENKKHILEERTGEISSTLCTEEENKQSSVVSSTKDIADSCQANDGTSLNDKMDVETDESHNTPKGFLRTTESVMELCNELQETILKKGVPNSVELMEVTSNNVDHTLPKITQPTKLNNSSCDEISDCFSAINSSVDAVEAILQSSSDTEKENNKASDNSNSDSMDTENLTCSQSGSEPVSDSEANKCLDVRLKENAAIIEASPSNKDPSATTESLDSAANAGEDNRTKLSESKVIPDTTTEPEPNKNEAPRNDSSLDSDKENSTPNSVTSATDVSKEKQKGPESHETSVEGENQSLSGLKIESISTLIETSDFFSSQEGQKTTSENNTNSETVEKTAKTNTDSAECSNSAVQGSSSGNESEESVPIEVQSSEPEVVSEQFSNPSSVQDTITDEDRSEINVNEHLEVQMNTNSRTDGEPDIVFSQQMVQNIKQEPIDTHETMPSDQPIFPIRVKSEFSSYDFDDGGVDMGSHPSISGQETNKCSICNRKYSSLSNYLKHLQTKVHLYNASLDPSENMSLPNEGMAPDHIDSRMNYSDSFSEDSRLSGYSNDSPMLRSRLCSEDFMPPSINKHQHSMVRQAQPRLPYPTSLCKFPRRKEKCKLCNTKFTYISEMRRHLLSKKHKSNERLMRDNDIMMRENDRMIRITEQMMREKERSMRERAMMYPKKEETPPLQSEKNPSLFICPIEDCHYSCQKGVRLLAHMKTHGIGQPPAAPSLQVTKELESAGAKPKLSLRQQELLKKELDKRKANALSEQMTVEPLVHVYKCDGCSKAFFRESGLKKHSYYCSAVIANQQEYEDDDEEEEEEEEEEEEDEEIPSKLSDNISNSLQMKKMHCPICNLTFAAKSVFISHVQIYHKGSALESGLFRPKKTVITSNKLRVKSRKGHGYVCNHCGKKFNLLSSLNFHLKVHSTKHICKICKKGYDSRRAFMDHCRLHFLPPGSKQTLCHKCFRVFKTRAEFAHHRKHDMCSIKLKIYTCNICQHSFKDPTALDEHKLRFHNDALDVLDDEPPPVDRRQMVDFDTGNENRPGTSAKSHSSYLNQPSNSAKTDPFLYCDVCDRDYATLASLKKHMWKYHQTKPALARQLELAKKNNVLKANVLKANVSKCWKCKHCRRVFDTRRMLVVHLKKCKYNVFGLEDGMCLQCGKWCESGKSRICRFCLPDLKKIPKPKKSLPEPNFLMTPKSEMMIKQEVNSAPARILNPAFPSTLPKIKKPPPIKGIRLMKCPVGSKYFRSELLMIKHYSQCDGSCENRCSHCRKLFNSAKEYRVHLLNSNCYGHSRGKTKTPTKSPLKQVNTFSVSNYPELESFVPKSNDAEVPGEVSLIDSSISDENSMMGMDSSMLNESSNKVDEEKSIKIGRVCTICNKVITMQRGVYRHVYGCFKINMLTQESVSCKKCSRTFSKHLSMKENTATIKQHILDCHYIPYYQGEGLLEDGSPSEVPPPILCYVCSFGFSNHDNLRRHILEHRSKKDEVNNIVLLLEAEMVSEKRLNSGMISYNIQIQPESTETLSSLPVRKNNVLRFKVPGVHSLESRKVIRKKLLQCEKCNRKFTNRNKFLRHKKVHGIVTQSVFHEVSENYINFITDHAQQQAPPSTPPLEPMPPPPTTN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -