Acus000210.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Arma custos
Gene Symbol
-
Assembly
GCA_037127475.1
Location
CM073759.1:4533050-4545686[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 41 0.0064 1.4 11.5 0.5 2 23 75 97 74 97 0.94
2 41 0.012 2.6 10.7 0.9 1 23 103 126 103 126 0.94
3 41 0.058 12 8.5 3.0 1 23 132 155 132 155 0.93
4 41 0.024 5.3 9.7 3.4 1 23 161 184 161 184 0.93
5 41 0.0086 1.8 11.1 2.1 1 23 190 213 190 213 0.96
6 41 0.012 2.6 10.7 5.3 1 23 219 241 219 242 0.95
7 41 0.081 18 8.1 3.6 1 23 248 271 248 271 0.94
8 41 0.0072 1.6 11.4 2.8 1 23 277 299 277 300 0.95
9 41 0.072 16 8.2 4.7 1 23 306 329 306 329 0.95
10 41 0.25 54 6.5 4.0 1 23 335 358 335 358 0.94
11 41 0.0019 0.42 13.2 2.2 1 23 364 387 364 387 0.97
12 41 0.037 8 9.1 2.4 1 23 393 416 393 416 0.94
13 41 0.015 3.2 10.4 2.2 1 23 422 445 422 445 0.97
14 41 1.3 2.9e+02 4.2 4.2 1 23 451 474 451 474 0.92
15 41 0.012 2.7 10.7 1.8 1 23 480 503 480 503 0.94
16 41 0.12 26 7.5 5.7 1 23 509 532 509 532 0.94
17 41 0.013 2.8 10.6 1.3 1 23 538 561 538 561 0.94
18 41 0.043 9.2 9.0 0.2 1 20 567 586 567 588 0.93
19 41 0.01 2.2 10.9 3.2 1 23 596 619 596 619 0.97
20 41 0.0072 1.6 11.4 2.8 1 23 625 647 625 648 0.95
21 41 0.072 16 8.2 4.7 1 23 654 677 654 677 0.95
22 41 0.29 63 6.3 4.2 1 23 683 706 683 706 0.94
23 41 0.0019 0.42 13.2 2.2 1 23 712 735 712 735 0.97
24 41 0.037 8 9.1 2.4 1 23 741 764 741 764 0.94
25 41 0.015 3.2 10.4 2.2 1 23 770 793 770 793 0.97
26 41 1.3 2.9e+02 4.2 4.2 1 23 799 822 799 822 0.92
27 41 0.012 2.7 10.7 1.8 1 23 828 851 828 851 0.94
28 41 0.12 26 7.5 5.7 1 23 857 880 857 880 0.94
29 41 0.013 2.8 10.6 1.3 1 23 886 909 886 909 0.94
30 41 0.022 4.8 9.8 1.0 1 23 915 938 915 938 0.94
31 41 0.01 2.2 10.9 3.2 1 23 944 967 944 967 0.97
32 41 0.13 28 7.4 1.1 1 23 973 996 973 996 0.94
33 41 0.013 2.8 10.6 1.3 1 23 1002 1025 1002 1025 0.94
34 41 0.022 4.8 9.8 1.0 1 23 1031 1054 1031 1054 0.94
35 41 0.01 2.2 10.9 3.2 1 23 1060 1083 1060 1083 0.97
36 41 0.0061 1.3 11.6 2.2 1 23 1089 1112 1089 1112 0.97
37 41 5.5 1.2e+03 2.3 3.6 1 23 1118 1141 1118 1141 0.86
38 41 9.1 2e+03 1.6 3.7 1 23 1147 1170 1147 1170 0.83
39 41 0.018 3.9 10.1 2.1 1 23 1176 1199 1176 1199 0.94
40 41 1.9 4.1e+02 3.8 3.0 1 23 1205 1228 1205 1228 0.90
41 41 2.1 4.6e+02 3.6 0.2 1 13 1243 1255 1243 1257 0.82

Sequence Information

Coding Sequence
ATGGTAAGGCCTCATTTTGAGTTGTGCCCTTCTAAGAGTGGAATTCAATACTATGATGAAAAGCAATGGGCTGAGACTGCACCCCTGTCTAATACCTTGAGTAaatatgaaaataaatgccAAGGAAGTGAGAAGACCCAACAAtatcctcactgtgattataaattgGCAGAATCTGGAACTATGATAAGGCAAAAAATGGTCCGTCGTAAAGAGAAAAATCAATGTCcacactgtgattataaatcagcaacaTCTGGAGCTATGAAAAGGCATGTAATGGCCAGTCATAAAGGTGAGAAgtctcatcaatgtcctcactgtgattataaatcagcacaatctggagctatgaaaatacatgtaatggcccgtcatacaggggAGAAACCTCATCactgccctcattgtgattataaaacagCACAATCTGGAGCTATGAAAAATcatgtaatggcccgtcatGCAGGGGAGAAACCTCATCACtgccctcactgtgattataaaacaGCAACATCTGGAGCTATGAAAAGAcatgtaatggcccgtcatacagatgagaagcctcatcaatgtcctcactgtgattataaatcagcagaatctggaaatatgaaaaatcatgTAATGTCCAATCATACAGCgaagaagcctcatcaatgtcctcactgtgattataaatcagcaaaaTCTGGAAATATTAAAAGACATGTAATGCGCCATCATACAGGgaagaagcctcatcaatgtcctcactgtgattataaatcagcagaaTCTGGAAGTATGAAAAGACATGTAATGGCCTGCCATACAGGGGagaaacctcatcaatgtcctcactgtgattataaatcagcacgtTCTGGAGatatgaaaatacatgtaaTGGCCCATCATATGgatgagaagcctcatcaatgtcctcactgtgattataaatcagcacgttctgaaactatgaaaatacatgtaatgcaccgtcatacaggggagaagcctcatcaatgtcctcactgcgATTATAAGTCAGCACAACTGgtatatgtaaaaaaacatgtaatggcCTGCCATACAGGGGagaaacctcatcaatgtcctcactgtgattataaatcagcacgtTCTGGAGatatgaaaatacatgtaatgactcgtcatacaggtgagaagcctcatcaatgtcctcactgtgattataaatcagcacaatctggagctatgaaaatacatgtaatggcctgtcatacaggtgagaagcctcatcaatgtcctcactgtgattataaatcagtagaatctggaaatatgaaaatacatgtaaTGCGCCGTCATACAGgagagaagcctcatcaatgtcctcactgtgattataaatcagtacAACTTAGAGATATAAAATATCATGTAATGGCCTGTCATGCAGGGGagaaacctcatcaatgtcctcactgtgattataaatcagcacgtTCTGGAGATATGAAAATACATGTAGTGCGCCGTCATACAGGgaagaagcctcatcaatgtcctcactgcgATTACAAATCAGTCAAATTTTCAAATGTGAAAAGGCATGTTATGGCATGTCATaaaggtgagaagcctcatcaatgtcctcactgtgattataaatcagcacaatcTGGAACTATGAAAATTCATGTAATGGCCAGTCATAAAGGTGAGAAgtctcatcaatgtcctcactgtgattataaatcagcacaatcTGGAACTGTGAAAATTCATGTAATGGCCAGTCAAaaaggtgagaagcctcatcaatgccctcactgtgattataaatcagcacgttctgaaactatgaaaatacatgtaatgcgccgtcatacaggggagaagcctcatcaatgtcctcactgtgattataaatcagcacgtTCTGGAGatatgaaaatacatgtaaTGGCCCATCATATGgatgagaagcctcatcaatgtcctcactgtgattataaatcagcacgttctgaaactatgaaaatacatgtaatgcaccgtcatacaggggagaagcctcatcaatgtcctcactgcgATTATAAGTCAGTACAACTGGTATATGTGAAAAAACATGTAATGGCCTGCCATACAGGGGagaaacctcatcaatgtcctcactgtgattataaatcagcacgtTCTGGAGatatgaaaatacatgtaatgactcgtcatacaggtgagaagcctcatcaatgtcctcactgtgattataaatcagcacaatctggagctatgaaaatacatgtaatggcctgtcatacaggtgagaagcctcatcaatgtcctcactgtgattataaatcagtagaatctggaaatatgaaaatacatgtaatgcgccgtcatacaggggagaagcctcatcaatgtcctcactgtgattataaatcagtacAACTTAGAGATATAAAATATCATGTAATGGCCTGTCATGCAGGGGagaaacctcatcaatgtcctcactgtgattataaatcagcacgtTCTGGAGATATGAAAATACATGTAGTGCGCCGTCATACAGGgaagaagcctcatcaatgtcctcactgcgATTACAAATCAGTCAAATTTTCAAATGTGAAAAGGCATGTTATGGCATGTCATaaaggtgagaagcctcatcaatgtcctcactgtgattataaatcagcacaatcTGGAACTATGAAAATTCATGTAATGGCCAGTCATAAAGGTGAGAAgtctcatcaatgtcctcactgtgattataaatcagcacaatcTGGAACTGTGAAAATTCATGTAATGGCCAGTCATaaaggtgagaagcctcatcaatgccctcactgtgattataaatcagcacgttctgaaactatgaaaatacatgtaatgcgccgtcatacaggggagaagcctcatcaatgtcctcgcTGTGATTACAAATCAGTCAAATTTTCAAATGTGAAAATTCATGTAATGGCCAGTCATaaaggtgagaagcctcatcaatgtcctcactgtgattataaatcagcacaatcTGGAACTATGAAAATTCATGTAATGGCCAGTCATAAAGGTGAGAAgtctcatcaatgtcctcactgtgattataaatcagcacaatcTGGAACTGTGAAAATTCATGTAATGGCCAGTCATaaaggtgagaagcctcatcaatgccctcactgtgattataaatcagcacgtTCTGAAACTATGAAAATACATGTAATGCGCCGTCATACAAgggagaagcctcatcaatgtcctcactgtgattataaatcagcacgtTCTGAAGCTATGAAAATACATGTAATGCGCCGTCATACAggggagaagcctcatcaatgtcctcactgtgattataaatcagtagAACTTAGAGATATAAAATATCATGTAATGGCCTGCCATACAGGGGagaaacctcatcaatgtcctcactgtgattataaatcagcatgTTCTGGAGATATGAAAATACATGTAGTGCGCCGTCATACAggggagaagcctcatcaatgtcctcactgcgattataaatcagcaagaTCTGATGTTATGAAAAGACATGTAATGGCCCGCCATACAGGAGagaaacctcatcaatgtcctcactgtgattataaatcagcagaaTCTGGAAAGATTAAATTACATGTAATGGCCTGCCATACAAGGGAaaaacctcatcaatgtcctcactgggagaagcctcatcaatgtcctcactgtgattataattCAGCAAGATCTGGAGGATCAAAGGATAATGCTGCCGACTTAGCGTCACGCTATCGGGGGCCTATTACATCTTTTGGGGATTCTGACATTATGGATCTAGAACTACCTGAACTCAAAAAGGTTATAACATTGTTATCGGTGGAAAAATCCTCATTTGTTGATGAATTCGCCCAAAATTGTTCATCTTTTGATAAAATGGTGCGAGTATGGGCACTAGTTTTGGCGATTTTCGAAAAACCTCCGACTGGAAAGAAGCTCTGGAGTCTTGCGTCTGAAAGAAACATCACACGCACTCGTTACTTTGATAAAAGGTACTGGTTCTCAGAAATATCATCTAATAAATGGGCTTCCGTGTCTTTAAAACAGTTAAGCCCATTCATTGATTCCCATGGTGTCATCAGGGTGGGCGGTCGCCTGCACAACTCACCACTCTCTTTTGAATCGAACATCCAATATTGCTACCCCACAAATCCAATTTCGCATCAATACTGGATTTTATCAGCCCATAAAATTATCCGATACAGAATTCATCAATGCTTGAAATGCCATCGCATCCGTGCTCAGAATTACACACCATTAATGGGGAATCTCCCAGTCTCACGATTTGAGGAAGCGTACTACTGTTTGTCCGTCTGTCTTGGTACGAAAGCCGTACACATTGAGGTGGTCTCTGACTTGTCCACCGACGCCTTTCTTGCTACTTTGGATAGATTCGTTTCTCGGCGAGGACtaccaagcaaaatgtattccGATAACGCTACGAACTTCAGAACATGTTCGAGTTATGTTGCAGAGAACGCTGCAAAAAGACTCGAGCTGCATCTCGGTAAACTGCATTCTTGCGATCTCGATTCCAGAGATCATCAATCCAGAGATAATCCAGAAATCTTAAAGGAACatcAGGATGCAAAGGCCAAAAATGTTATTGCTAGTGGTCTTGCAGACAATATTTTTTGCACTGTTAAAGAGAAGGAGACGGCAAAGGGATTAATGGAAGCCCTATTAGCAACCTATGAAAAACAAGGTATGAAGTCTCTTGTCATGCTGCAAAGAACTTGGAGAAACATGGTTTACAACAATGACCAACCTCTACTAGAGTTTTTTCAGAAGTTTGAAACCATGGCATCTGAAGTAGAAGTGGCTGGTGGAAAATTGGAACAAGAAGAGATAGTGAATCAGTTACTTGTtgcaatgccatcagagtttGATTCCGTGGTGTCAGTATTAGACATTGAGTACAATAAGGACAAATCAGGACTTTGTTTGGAATATGTGAAAAACTGTCTTTTGTCGGAGTATGAGAGAAATATGAGAAGGGAGGATGATCTATCACCCTACAGAACTAAAGAAGTATGGAATCAGAAAGAAGAGGTAAATTCGGACAAATTTAACAAGATGAAAGACGCTGTTGAAGATAATTTACTTGTGTTTAATTGGTCTAGTTTAAAGTCAACAGGAGATAAGGGAATATGCTCGTTTAAGGAATTTTTGGTACATTGGGAATCCAGTAGACATGTCAAGAGTGTCTAA
Protein Sequence
MVRPHFELCPSKSGIQYYDEKQWAETAPLSNTLSKYENKCQGSEKTQQYPHCDYKLAESGTMIRQKMVRRKEKNQCPHCDYKSATSGAMKRHVMASHKGEKSHQCPHCDYKSAQSGAMKIHVMARHTGEKPHHCPHCDYKTAQSGAMKNHVMARHAGEKPHHCPHCDYKTATSGAMKRHVMARHTDEKPHQCPHCDYKSAESGNMKNHVMSNHTAKKPHQCPHCDYKSAKSGNIKRHVMRHHTGKKPHQCPHCDYKSAESGSMKRHVMACHTGEKPHQCPHCDYKSARSGDMKIHVMAHHMDEKPHQCPHCDYKSARSETMKIHVMHRHTGEKPHQCPHCDYKSAQLVYVKKHVMACHTGEKPHQCPHCDYKSARSGDMKIHVMTRHTGEKPHQCPHCDYKSAQSGAMKIHVMACHTGEKPHQCPHCDYKSVESGNMKIHVMRRHTGEKPHQCPHCDYKSVQLRDIKYHVMACHAGEKPHQCPHCDYKSARSGDMKIHVVRRHTGKKPHQCPHCDYKSVKFSNVKRHVMACHKGEKPHQCPHCDYKSAQSGTMKIHVMASHKGEKSHQCPHCDYKSAQSGTVKIHVMASQKGEKPHQCPHCDYKSARSETMKIHVMRRHTGEKPHQCPHCDYKSARSGDMKIHVMAHHMDEKPHQCPHCDYKSARSETMKIHVMHRHTGEKPHQCPHCDYKSVQLVYVKKHVMACHTGEKPHQCPHCDYKSARSGDMKIHVMTRHTGEKPHQCPHCDYKSAQSGAMKIHVMACHTGEKPHQCPHCDYKSVESGNMKIHVMRRHTGEKPHQCPHCDYKSVQLRDIKYHVMACHAGEKPHQCPHCDYKSARSGDMKIHVVRRHTGKKPHQCPHCDYKSVKFSNVKRHVMACHKGEKPHQCPHCDYKSAQSGTMKIHVMASHKGEKSHQCPHCDYKSAQSGTVKIHVMASHKGEKPHQCPHCDYKSARSETMKIHVMRRHTGEKPHQCPRCDYKSVKFSNVKIHVMASHKGEKPHQCPHCDYKSAQSGTMKIHVMASHKGEKSHQCPHCDYKSAQSGTVKIHVMASHKGEKPHQCPHCDYKSARSETMKIHVMRRHTREKPHQCPHCDYKSARSEAMKIHVMRRHTGEKPHQCPHCDYKSVELRDIKYHVMACHTGEKPHQCPHCDYKSACSGDMKIHVVRRHTGEKPHQCPHCDYKSARSDVMKRHVMARHTGEKPHQCPHCDYKSAESGKIKLHVMACHTREKPHQCPHWEKPHQCPHCDYNSARSGGSKDNAADLASRYRGPITSFGDSDIMDLELPELKKVITLLSVEKSSFVDEFAQNCSSFDKMVRVWALVLAIFEKPPTGKKLWSLASERNITRTRYFDKRYWFSEISSNKWASVSLKQLSPFIDSHGVIRVGGRLHNSPLSFESNIQYCYPTNPISHQYWILSAHKIIRYRIHQCLKCHRIRAQNYTPLMGNLPVSRFEEAYYCLSVCLGTKAVHIEVVSDLSTDAFLATLDRFVSRRGLPSKMYSDNATNFRTCSSYVAENAAKRLELHLGKLHSCDLDSRDHQSRDNPEILKEHQDAKAKNVIASGLADNIFCTVKEKETAKGLMEALLATYEKQGMKSLVMLQRTWRNMVYNNDQPLLEFFQKFETMASEVEVAGGKLEQEEIVNQLLVAMPSEFDSVVSVLDIEYNKDKSGLCLEYVKNCLLSEYERNMRREDDLSPYRTKEVWNQKEEVNSDKFNKMKDAVEDNLLVFNWSSLKSTGDKGICSFKEFLVHWESSRHVKSV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-