Acus049558.2
Basic Information
- Insect
- Arma custos
- Gene Symbol
- -
- Assembly
- GCA_037127475.1
- Location
- CM073762.1:106519029-106520945[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.3e-08 1.8e-05 26.4 0.0 2 36 16 49 15 55 0.89
Sequence Information
- Coding Sequence
- ATGGtgtctaaatataaaagaaaaagccAGCAGCAGTCCTGGGACCCTCAGTCGATGCAACGAGCTATAAATGCTGTGAAAGATGGTATGGCATTTAAAACAGCTGCCAAAACCTTTAATGTGCCCAGAAACACCTTGAAACGTCGAGCTCTAAGTAAGAACCAGTGTGCTactgaaaacaaaaaagttctTGGACACTACCGTCCTGTCTTTAACGAAGAACAAGAACAGCAGCTTTTACAACATCTTTTGGATATGGAGGTACGTTTTTTTGGAATTACAGTATCTGATTTGCGTAGCCTTGCATACCAACTggcagaagaaaataatatctcAAATAATTTCAACCATGATAAGAAATTAGCTGGGAAAGATTGGGTTAGGGGCTTTAGACAGCGCCACCCTGAATTGGTTTTGAGAAAACCAGAGGCGACTTCGGTAGCAAGAGCTCAAGCCTTTAACAGGATAAATGTCAATAAGTTCTTTGACATTTTAGAGGATGTCCAGAAAACCCACTTCTATCCAGCTCACAATGTGTACAATGTCGACGAAACGGGACTTTTGACTGTTCAGTCCAAGTCCTCAAATGTTTTCGCATTAAAAGGCAGACATCAAGTTGGCTCAGTTACATCTGCCGAAAGAGGAGTTCTCTCTACATTTGTAGTTTGTATGTCAGCAGGGGGGACGTTTATACCTCCTATGGTCATATTTCCCAGACAGAGAATGAAAGTTGAACTCCAAGATGGTTCTCCCCCTGGGATAGCTTTTGCTTGCCATCCAAAAGGGTGGATGCAATCCGAAATATTTACGCAATGGTTCGAACACTTTTTGGCCTTTGCCAAACCATCAAAAGATGACCCTGTGTTATTAATACTTGATGGCCATGCAACTCACACAAGGAAccttgaatttattgaaaaagcaAGGAAGCGCCATACTACTGTGGTTTGCATCCCTCCTCATTGCAGTCACAAGCTCCAGCCGCTGGAGGTATCCTTTATGGGGCCTTTCAACACTTATTATGTCCAAGCAATTGAGAGATTCTTGCGCAATAACCCTGGTAGGCAAGTAACTCAATACCAGGTTTCTCGCCTCCTTGGGGAGGGATTTTTAAGTGCTGCTACCCCTACTGTTGCTGTAAAGGGATTCAGAAGATGTGGCATAGTTCCAGTTAACAGGGACGTGTTTACTGAAGCGGACTTTGTTGCATCTACAACCACAGAAGTTCTCAATCCCTCTGACACAACAGCTGAATTCAATCAAGTGTCATCGGACCCTGACGAAGAAAGATCTGCAGACCCCGAACCCAATGCGAGTATTACCTTAAGGCCTACTGTAGGTTCTGTAGACCCCAGTACATCATTTTTTCTCATCTCTAGAGGCTCCCCTCCCCTCATTAAACCCAACACCTCATCTGCCTTAAGCCCAAGCTCCATCCCCAGTACCTCATCTGCTGTAAGTCCAATCGCCATACCCTGTACCTCATTTGCTGTAAGCCCTCATGATATTATCCTAATCcctataacaaaaattatcaaacgaaaaaataagaggaaaaaggGTTCGGCAGCAGTTTTGACTTCAAGCCCTTACAAGGCTGAACTTGAAGCTGCGAAAGtagaaaaggaagaaaaagaaagacttaagaaaattaaactagaaataataaaagaaaaaaagaagttgctaaagaaaaaaaataaacctattcAGGAGAAAAAGAAATCAAAAGTGGAAAAACGTGATTTGTTTAGTGACGAGAGTGATGTAGATTGTCTCTACTGTCAGGACTTGTATTCaaagtctaaaaaaaatgaagagtgGATCAGATGCTCTGGTTGCTACAATTGGGCTCATGAATCTTGTGCTGGGTGTGAGGAGGAAGATGATGAGTTCATATGTGACTTCTGTAAATGA
- Protein Sequence
- MVSKYKRKSQQQSWDPQSMQRAINAVKDGMAFKTAAKTFNVPRNTLKRRALSKNQCATENKKVLGHYRPVFNEEQEQQLLQHLLDMEVRFFGITVSDLRSLAYQLAEENNISNNFNHDKKLAGKDWVRGFRQRHPELVLRKPEATSVARAQAFNRINVNKFFDILEDVQKTHFYPAHNVYNVDETGLLTVQSKSSNVFALKGRHQVGSVTSAERGVLSTFVVCMSAGGTFIPPMVIFPRQRMKVELQDGSPPGIAFACHPKGWMQSEIFTQWFEHFLAFAKPSKDDPVLLILDGHATHTRNLEFIEKARKRHTTVVCIPPHCSHKLQPLEVSFMGPFNTYYVQAIERFLRNNPGRQVTQYQVSRLLGEGFLSAATPTVAVKGFRRCGIVPVNRDVFTEADFVASTTTEVLNPSDTTAEFNQVSSDPDEERSADPEPNASITLRPTVGSVDPSTSFFLISRGSPPLIKPNTSSALSPSSIPSTSSAVSPIAIPCTSFAVSPHDIILIPITKIIKRKNKRKKGSAAVLTSSPYKAELEAAKVEKEEKERLKKIKLEIIKEKKKLLKKKNKPIQEKKKSKVEKRDLFSDESDVDCLYCQDLYSKSKKNEEWIRCSGCYNWAHESCAGCEEEDDEFICDFCK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00165153;
- 90% Identity
- iTF_00165160; iTF_00165153; iTF_00165165;
- 80% Identity
- -