Basic Information

Insect
Arma custos
Gene Symbol
Mblk-1
Assembly
GCA_037127475.1
Location
CM073763.1:16967760-16973276[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.3e-16 1.7e-13 52.1 0.0 1 38 292 330 292 333 0.97
2 2 3.3e-18 4.4e-15 57.1 0.0 1 43 480 523 480 525 0.95

Sequence Information

Coding Sequence
ATGCAGGATCATAAAGGCGGCGAGTTATTTTACGATCTCGAGAGCCCCAATGTTCCATTTTACGATCTTGTACTCTCTCAATGGCGAAGATCGGGAGTGGGGAAAGAGCCGGAGGTGCGACCGTTTGTCATTTCGTTGCATAACGCATGCATTGGAATGCAGAATGCAACGCTGCGCTGCGAGGGCGGGAAGAAGAAGACTTTTCCACTGCCGTTTAACGATGGCCACACACAACACATCCCTTACAATAGTCGAGTGGAAATGGTACATCCACGGAGGATAGTTAATTCTCCAGCAGTGAGTGGCCAAGATGAGATAGCGTCCGATTATTCTGTTCAGTACGCGACTTTGTCTTTGGTTAAGAGAATCGATTGTAATCAAAGGCTGAGGAAGTTAATTACTGCAAGGAAACTATCGCTAGCGGCCTGGCGTGAGGACCACGAGGCGTGCAGGGGACTGTCCTCTCATTACCTCATATCGGATCGGTCCCACGGTGGCCGCGGCTACCAGCGGTCCCTTTACCGCAATCACGCCTTCCACTTACTTGCAAGAAGGACTGCTCggCTGGAAAGAGTGGCAGAGGAATTGATGGGCAGAAGAACATGGATGAGCTACCAAGACGTGATGGTCGGGCAAGAGACTAAGAGCAGCGAACCTCTCTGCGTTACGCCTAGCCGGCACCCGCCTCTCATCGCCAcgACTCGAGAAGGATCGCGGAGCCCGATGGCCGGGGGATGGTACGTGCGGCCGAGCTCTCCGGAGCCACAACCGCTCGACCTCAGCGCTAAGCCGCCCAAGCCCCCGCTTAGCCCAAGCAAGGCCATCTTCAAGGCGAAACCCAGGCCTACAGCTGTCGGCACCAGGAGGAGCTACACGGAGGACGAGCTTCAAGCGGCACTCAGGGACATCCAGAGCGGCAAGCTGGGCACCCGGAGAGCTGCGGTCATCTACGGAATCCCGAGGTCCACCCTCAGGAACAAGGTCTACAAGATCTCACAAGGTCCCCGCGATATCGCAGGGGTCGAGGAGAGAGCTGACGATGAGGAGGAAGATGAAGACAGGGACGAGGACGCGGAAGAAGAGCGGGAGACGGAGAAGGTGCTGATGCGGCCACTGCTCAGCATGGAGGACGTCATCAGGCTCACCTCGGAGGTCAGGTCCTGGCCCTGTCTTCAGCAGCTCCTGGGAGGGGCCTCCACCTCGGCGGAGGAGCCGCTGCGGGTTCCCATCTTCAAGACCGTCAAGAATGGAGAAGAGCCCGTACCTGTACCCAAGGACCAACCCCTCGACTTCAGGAGAGAAGTGAGGAATCACAATAACAAcagtataaacaacaacaatcaCCTCGAAGAGAAGAAGCACTCCCCTGGAGGAGGCAACAAGCAGCAGTCCGGAGGAAAAGGAACGCGGCCGAAGCGAGGAAAGTACCGCAACTACGACAGGGACAGTCTGGTGGAGGCGGTGAGGGCGGTCCAGCGCGGCGAGATGTCCGTGCATCGGGCCGGCTCTTACTACGGCGTCCCGCACTCCACCCTCGAGTACAAGGTGAAGGAACGCCACCTGATGCGGCCCCGGAAGCGAGAGCCCAAGCCGCAGCCGGAGGAGAAGAGGAAGGAGGAGGAGAAGCGAGTGGTGCCGCCCCCGCCGCCGCGGCCGCCCCAGGTCACCCCGCCCCTCACCAACGGCCTCAAGATGCAGCTCTTCGACCCGTCCATCGCCTACCGGGGGCCCTTCCCGCCCTTCTGGCAGCCCCCATTCCCGCCGATCCTCGAGTTCGGGCGCCCTGACCTTTTCGCCCAGCAGCTGTCCACGACCGCCCCCCTCACCAAGAGCACGAGAGAGATAGCAGAGAGCCTCCTAGAGGCGGAGAATGGGAGCTTCCTGGACGGGATCATCAGGTCGAGCCTGGACACGGGCCTCCCAGGgcagcaggagtccgggaaagTGCTGATGGAACAGCTGTGCAGGGCGGAGAGCAGCAAGCCCCCTCCGCCCGCCGGCTCGCCGCCCGCCCAGAGGACACCGTCCCCGAAGAACTGCTGA
Protein Sequence
MQDHKGGELFYDLESPNVPFYDLVLSQWRRSGVGKEPEVRPFVISLHNACIGMQNATLRCEGGKKKTFPLPFNDGHTQHIPYNSRVEMVHPRRIVNSPAVSGQDEIASDYSVQYATLSLVKRIDCNQRLRKLITARKLSLAAWREDHEACRGLSSHYLISDRSHGGRGYQRSLYRNHAFHLLARRTARLERVAEELMGRRTWMSYQDVMVGQETKSSEPLCVTPSRHPPLIATTREGSRSPMAGGWYVRPSSPEPQPLDLSAKPPKPPLSPSKAIFKAKPRPTAVGTRRSYTEDELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKISQGPRDIAGVEERADDEEEDEDRDEDAEEERETEKVLMRPLLSMEDVIRLTSEVRSWPCLQQLLGGASTSAEEPLRVPIFKTVKNGEEPVPVPKDQPLDFRREVRNHNNNSINNNNHLEEKKHSPGGGNKQQSGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPEEKRKEEEKRVVPPPPPRPPQVTPPLTNGLKMQLFDPSIAYRGPFPPFWQPPFPPILEFGRPDLFAQQLSTTAPLTKSTREIAESLLEAENGSFLDGIIRSSLDTGLPGQQESGKVLMEQLCRAESSKPPPPAGSPPAQRTPSPKNC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-