Acus023336.1
Basic Information
- Insect
- Arma custos
- Gene Symbol
- -
- Assembly
- GCA_037127475.1
- Location
- CM073760.1:41434094-41462021[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 1.6e-14 2.2e-11 45.3 0.1 2 41 219 259 218 262 0.90 2 5 7.3e-06 0.0097 17.6 0.0 1 27 272 298 272 298 0.98 3 5 0.17 2.2e+02 3.7 0.0 27 39 460 472 460 475 0.88 4 5 2.5e-16 3.3e-13 51.1 0.0 1 45 489 534 489 534 0.98 5 5 2.5e-16 3.3e-13 51.2 0.0 2 42 542 583 541 584 0.96
Sequence Information
- Coding Sequence
- ATGTTAGTagcattgttggatccagagTTTAGAGGACCTTGGCACGTGACTGAGAACAGTGGAGGCGACACCTTTATGCGACCAAGTccgtactggGATACACCTTTAAGTACAAACCGAATTCGATATGATGCTCTAACTCCAAGTGGGACTCATAGTGACGTAGGCACTTCAACTGATGATCAGGAAAGCAAAGAAGTTATTAGTGATACAACTATGGGTATGGCATCACCACTACCTGAGCTATCGCAAAAAGTTACACCACAGGTGGTGGTAACAGAACATGAAAATGAGGTGAACGAATCAACATCTTCTGTTGCTCTTGTTTCTACTGTAGATATACCTCAAGGAACGACTCATAGGGACATTGCAGTTGATGCTAGTGATCTTGCTGCTGGAGTGCAAGATGAAGAGGATGACAATGTCAAAGTCAAATTTGAAACTCTTAGAGCTATTGATCAGACAGAGCACATGGATATGGAACATATGCCTGATCGTGGTGTTGAAGGAGTTGGAGATGAGGGTATGCATACCATGATGATAACACCTGAATTACTTGGCCTCATTCCTTCCTCACAATCtgATGGGAGTGATTCTGGCAGTATCACCAAAGGCACTACAAATAACATGGGTAGTGGAGGTAAATCTTGGAGGCAAGAAGATATGGAAGCTGCACTTGAAGCCCTTAGGTCAGGGTCTATGTCCTTAAGCAGGGCTTCTGCTATATATAGTATACCATCAACTACTTTATGGCAGAGGGCTCACAggCAAGGAATTGAAACTCCTAAAAAGGATGGTCCATTGAAAACTTGGACTGAAGATAATCTAAATGTAGCCCTAGATGCTCTCAGAACTGGTTCAATATCAGCCAACAAAGCTAGCAAGGCTTATGGCTGGGCACCATTCCCGGTACCTGTCTTTCTTCCCTCTGTGGCACTTGGTGCTAACAGATGTGTCCTCTTGGAGGATAATGAACAGCGTTGCGCTGGTGCGGGATTGCCCCAAAAGTTGAAGAAGATTCTTCTCTCCGTGGCACTTGGTGCCGACGGATGCGCCCTCATGGGGGATAATGAACAGCGGTGTGCTGTTGTGGGATTGTCCCAAAAATTGAAGAAGAGACAGACAACAAGAGATGGTGTCCAAACAATATACCGAGAAGAGGCTCAAGAAGGAAGCAGCGATTGCGCTGGGCAATACGGAGCAATTGCTTCCTCCTCACAACACTTCACTAACTCTGGACATTGTCTGAACACTCTGCTACATGACTGCCACCTCATCTATCTAAGCGAGGAAATGGCAGGAACTAACAGGCACCTCTACTGGCTGGAACGTCAGAAAAGGGCAGTGGGGAAAATGAAATGTGTCTGGTTCTCTGGTGGAATTCCGAGTAGTACTTTGTACAAAATAGCCCGCAGAGAAGGCATTCGTTTAGCTGCCCCTTTCAATGCTGCTCCTACATCGTGGACTCCTGAAGATCTTGAACGTGCTTTGGAGTCTATCAGATCTGGGCAGTCAACAGTTCAGAGAGCGGCTGCTGAGTATGGTATTCCATCTGGCACCTTATATGGTAGATGTAAAAGAGAGGGGATTGAACTCTCTAGGGCTAACCCTACCCCTTGGTCAGAAGCTGCAATGAATCAAGCATTAGATGCTGTTAGaattGGGCAGATGAGTATAAATCAGGCAGCAATTCACTTCAACCTACCTTATTCCTCATTATATGGAAGGTTCAAGCGAGGTAAGTATGATGGTACAGGAGGAATTGATGATACCAGTGGGTCGATAGAGACTACTGGTACAGAAGCATCACCTGATCTTTTGCCCACGACTCAAAGCCAGCCTCAGATTATGCTAGTTCAATACCAACAGCCAATCCATATGTATCAACCTACCTGA
- Protein Sequence
- MLVALLDPEFRGPWHVTENSGGDTFMRPSPYWDTPLSTNRIRYDALTPSGTHSDVGTSTDDQESKEVISDTTMGMASPLPELSQKVTPQVVVTEHENEVNESTSSVALVSTVDIPQGTTHRDIAVDASDLAAGVQDEEDDNVKVKFETLRAIDQTEHMDMEHMPDRGVEGVGDEGMHTMMITPELLGLIPSSQSDGSDSGSITKGTTNNMGSGGKSWRQEDMEAALEALRSGSMSLSRASAIYSIPSTTLWQRAHRQGIETPKKDGPLKTWTEDNLNVALDALRTGSISANKASKAYGWAPFPVPVFLPSVALGANRCVLLEDNEQRCAGAGLPQKLKKILLSVALGADGCALMGDNEQRCAVVGLSQKLKKRQTTRDGVQTIYREEAQEGSSDCAGQYGAIASSSQHFTNSGHCLNTLLHDCHLIYLSEEMAGTNRHLYWLERQKRAVGKMKCVWFSGGIPSSTLYKIARREGIRLAAPFNAAPTSWTPEDLERALESIRSGQSTVQRAAAEYGIPSGTLYGRCKREGIELSRANPTPWSEAAMNQALDAVRIGQMSINQAAIHFNLPYSSLYGRFKRGKYDGTGGIDDTSGSIETTGTEASPDLLPTTQSQPQIMLVQYQQPIHMYQPT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -