Basic Information

Insect: Aricia agestis
Gene Symbol: -
Assembly: GCA_905147365.1
Location: LR990275.1:794918-804069[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.00062 0.044 14.7 0.6 1 23 351 373 351 373 0.98

2 10 0.12 8.5 7.5 0.3 1 23 380 403 380 403 0.84

3 10 0.0017 0.12 13.3 2.8 1 23 434 457 434 457 0.98

4 10 0.18 12 7.0 0.2 1 12 461 472 461 477 0.88

5 10 0.061 4.3 8.4 0.1 2 20 484 502 484 504 0.93

6 10 4.3 3.1e+02 2.6 0.1 2 23 547 569 546 569 0.87

7 10 0.00013 0.0093 16.8 1.2 2 23 585 606 584 606 0.96

8 10 1.4e-07 9.5e-06 26.2 1.3 1 23 612 634 612 634 0.98

9 10 0.21 15 6.7 7.9 1 23 641 664 641 664 0.97

10 10 0.00026 0.018 15.9 0.2 1 23 670 693 670 693 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.00062	0.044	14.7	0.6	1	23	351	373	351	373	0.98
2	10	0.12	8.5	7.5	0.3	1	23	380	403	380	403	0.84
3	10	0.0017	0.12	13.3	2.8	1	23	434	457	434	457	0.98
4	10	0.18	12	7.0	0.2	1	12	461	472	461	477	0.88
5	10	0.061	4.3	8.4	0.1	2	20	484	502	484	504	0.93
6	10	4.3	3.1e+02	2.6	0.1	2	23	547	569	546	569	0.87
7	10	0.00013	0.0093	16.8	1.2	2	23	585	606	584	606	0.96
8	10	1.4e-07	9.5e-06	26.2	1.3	1	23	612	634	612	634	0.98
9	10	0.21	15	6.7	7.9	1	23	641	664	641	664	0.97
10	10	0.00026	0.018	15.9	0.2	1	23	670	693	670	693	0.91

Sequence Information

Coding Sequence: ATGAGCTGTTGCGTTTTAAACTGTGTCAACAATGAGAACTCGGGGTCTCCAAACGATGATGTTATTTTCTACAGAATACCAAAAGAGTATTATTTGAAACAGTTATGGACAGAAGCTATTGGTACACCTGAGTGGGAACTACGGCCTAACAGTGTAGTATGTTCGGCACATTTTGGAGAGTTTGACTTTACCATCTCTGAAACGGGAGAAAAGTTGCTCATGGATGGTGCGGTCCCCAGCCAGTATCTTAAGACACATATCGATCTTCATGAAGCAGCTAAATTCAAAACCTGCAGAGTGTGCCTGGGCATGGACAGGAGGATGTACCACATCAGGGACTACAACTTACATCATGCTTATGAGATGATTGTTGGAGTTATGGTGGAGGCTAGAGACCGTCTACCTCAGATGCTTTGTTGGGAATGTGCCAATAAACTGATGTCATATAGAACATTCAAAGAGAAAGCGCAGAAAACACAACAGCTTCTATCAGATAAGCTCGCAGCTGAAGTGTGTGATATTCTAACTGTTGGCCATATAAAGTCTATAAATCGAATAAAATGTAATTTAAAATCTCATTTAACGCTCAAATTTACCGAGCCGGATAAGTTCGATGTGCACATCGACCACGACCGAGTGGTTCTGCTGCCGGAGATCAAAATCGAAGACAAGATCAAGTCTGAGGACATCGGTCAGGAAGCCGAATGTAACATAGACTTGAAACTGGAGGACGACGATGTGAAGGACGAGTTAAACCACAGCAGTGGCACCGACAGCGACGACATCAAACTCAGCGAGAGGAGGACTAGACTAGTAAGGAAAAGAAAGTTGCAGAAAAGAGAAGTGGCAGCCAGGAAAAGATCGAAGAAGGTGGTGAAAGAGAAAAACACTGATGGGGTGAAGGACCGCTTTAGATCCCAGCGGTGGGCGCAGCGGGAGGTGGAGCGGGCGGTGGAGCTCCCCACCTTCGAGGTCCGTCGCCTGACGCTGGAGGAGCAGCAGGCGGCCGTGGCGGCCCGGGCTCGCTCCGCCGCGTACCTCGACGCGCCCTACAAGTGTGAGGTCTGCTACCGCGGGTTCAGGTCGCAGGACACCTACGCCCTGCACGCCCTGAGACACAGCGAGAAGTGCGGCAAGTTCGAGTGCGAGGTGTGCAAGCGGCGGTTCCGGCTGGGGCGCGACGTGCGCCTGCACGCGGCGCGCAACCACGCCGACCAGTTCGCCTGCAAGGCCTGCTCCTTCGTCACGCAGTGCAGGAGGACAGCAGTGGACCATCAGAAGTGGCACGCCGGCAACACCTACCAGTGCCCGCACTGCCCCACCACACTCACCAAGTTCACGTCGTACATGTCGCACCTGCGCGTGAAACACTCGTCACGGTTCTCGTGCGAGCTGTGCGGATACACGTTCGTCAGCGAGCGCGGCGTGCAGGTGAAACTTGAAGGTCCGTACTGCGAGGAGTGCAAGCTGCGGTTCGCCAGCGACGAGGCCTATCAGCGCCATCTCACGCAGTCCTCCGTACACAGCAGCGATAGTAACCCGAATCGTATCCGCAACGAGAAGAACTATCCCCCGCAGTCGGTGAAGCGACACAGCGGCGGCGGCGCGCATCGCGAGCGGGACCCACCACAAGAAATACCCTGCGAACAGTGCGGCGAGCGGCAGGAGAGCTACCAGGCGTACGCGCGTCACTTCCGCGCGGCGCACCCCGGTCTCATCCGCACCAAGTTCCCGCGCGCCACCGGCAACTGCATGTGCGAGCAGTGCGGCAGGATGTTCGCGACCAAAACGCTGCTCCTGGACCACACGGCGACGCACACGGGTGAGAAGCGGTTCAAGTGCGACTCGTGCGACAAGGCGTTCACGAACAAGAAGAACCTGCGAGCGCACCAGAACGTGCACGGTGTGCAGGTCTCCACGCACCGCTGCCCGTACTGCGAGCGCGAGTTCTTCCACTACCAGAACTGCAACCGCCATGTGAAGACCGTGCACAAGGGCGTGAAGCAGTTCCAGTGTGAGATCTGCGGCAAGGAGTTCACGTCGGCTGCCGGCCAGCGCGCGCACGTCGACCACGTGCACCACAAGAAGCCCCGCCCCAAACGCGTGCGCGCTCGTGCCCCGTCCACCGCCTATCGCGATTGGTGA
Protein Sequence: MSCCVLNCVNNENSGSPNDDVIFYRIPKEYYLKQLWTEAIGTPEWELRPNSVVCSAHFGEFDFTISETGEKLLMDGAVPSQYLKTHIDLHEAAKFKTCRVCLGMDRRMYHIRDYNLHHAYEMIVGVMVEARDRLPQMLCWECANKLMSYRTFKEKAQKTQQLLSDKLAAEVCDILTVGHIKSINRIKCNLKSHLTLKFTEPDKFDVHIDHDRVVLLPEIKIEDKIKSEDIGQEAECNIDLKLEDDDVKDELNHSSGTDSDDIKLSERRTRLVRKRKLQKREVAARKRSKKVVKEKNTDGVKDRFRSQRWAQREVERAVELPTFEVRRLTLEEQQAAVAARARSAAYLDAPYKCEVCYRGFRSQDTYALHALRHSEKCGKFECEVCKRRFRLGRDVRLHAARNHADQFACKACSFVTQCRRTAVDHQKWHAGNTYQCPHCPTTLTKFTSYMSHLRVKHSSRFSCELCGYTFVSERGVQVKLEGPYCEECKLRFASDEAYQRHLTQSSVHSSDSNPNRIRNEKNYPPQSVKRHSGGGAHRERDPPQEIPCEQCGERQESYQAYARHFRAAHPGLIRTKFPRATGNCMCEQCGRMFATKTLLLDHTATHTGEKRFKCDSCDKAFTNKKNLRAHQNVHGVQVSTHRCPYCEREFFHYQNCNRHVKTVHKGVKQFQCEICGKEFTSAAGQRAHVDHVHHKKPRPKRVRARAPSTAYRDW

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01217823;
90% Identity: iTF_01217823;
80% Identity: iTF_00164454;