Basic Information

Insect: Aricia agestis
Gene Symbol: pita
Assembly: GCA_905147365.1
Location: LR990264.1:8943651-8969609[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 1.5 1.1e+02 4.0 0.7 2 23 197 219 196 219 0.87

2 10 0.00086 0.06 14.2 1.0 2 23 225 246 224 246 0.96

3 10 0.00014 0.0098 16.7 1.2 1 23 252 275 252 275 0.93

4 10 0.051 3.6 8.7 1.7 1 23 281 303 281 303 0.97

5 10 3.8e-05 0.0027 18.5 0.4 1 23 310 333 310 333 0.94

6 10 0.00019 0.013 16.3 1.2 1 23 339 361 339 361 0.97

7 10 4.7e-05 0.0033 18.2 6.5 1 23 367 390 367 390 0.97

8 10 5.9e-05 0.0042 17.9 0.2 1 23 399 421 399 421 0.95

9 10 0.003 0.21 12.5 0.1 2 23 427 448 426 448 0.97

10 10 0.092 6.5 7.9 0.3 1 20 454 473 454 475 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	1.5	1.1e+02	4.0	0.7	2	23	197	219	196	219	0.87
2	10	0.00086	0.06	14.2	1.0	2	23	225	246	224	246	0.96
3	10	0.00014	0.0098	16.7	1.2	1	23	252	275	252	275	0.93
4	10	0.051	3.6	8.7	1.7	1	23	281	303	281	303	0.97
5	10	3.8e-05	0.0027	18.5	0.4	1	23	310	333	310	333	0.94
6	10	0.00019	0.013	16.3	1.2	1	23	339	361	339	361	0.97
7	10	4.7e-05	0.0033	18.2	6.5	1	23	367	390	367	390	0.97
8	10	5.9e-05	0.0042	17.9	0.2	1	23	399	421	399	421	0.95
9	10	0.003	0.21	12.5	0.1	2	23	427	448	426	448	0.97
10	10	0.092	6.5	7.9	0.3	1	20	454	473	454	475	0.96

Sequence Information

Coding Sequence: ATGGAGAAAAGAAAAGAGAATATAAGTGCTCGTAAAATATGCCGTTTTTGTTTGACGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAGGATTCTGTAAATCTTCATTTAAAAATCTTAACATGCATTTCAGTTGAGGTTTTCCCATCAGACAAGATGCCCTGTTATATATGTCAACGCTGCAATACCCTAATGAACTTGTTTTATGAGTATAAACATATTGTCCGACAAGCTGATGAAAATATTTTGCATTATATCCAAACTGGTACCACACTAGAACCTATCAAGTGGTCATCGTCGTTGATAAAAGCTTCCAAAACATCCAAAGAAGTAATAATGAAAACTGTGGTGGAAGGTGGAGCGACTGTTCAAGTTTCATCTCAAGATGCCTCCGACAGTGAGGAAGAGGAATACTCCAATGTTTATAATGTAAAGATTGGAGATGGAATTGACAGTGAAGAAAAAACAGCTTGTATAAAAGTTGTATCAGCTAAAGCATCTGATAGTATAAAACCTTCCAGAACAAACAAAGAAGCTGTTAGATCTGAGAAGAATTCTATAGAGGGATGCTGGCCGTGCGATGAGTGTGACTGCACATACCCGCTGCAGCAGCTGCTCGACCTGCACAAGACACAGAAGCACCGAGCTAGGACGGTGAAGTGCGATAAATGTGATGCGAAATTCTTCAATAAGTATGATTTGTCCACTCATTTGGTGCGCCACTCTGACGAGATGCCATTCCAGTGTGTTGCGTGTGGCAAACGATTCAAGAGGAACATATTGCTTAAACGACATGAAAAATTTATTCATGCCGATTTGCCTCAACATGTATGTTCAAAGTGTCCAGCCTCTTTCCTTTCATTGGAAGAGTTTAAGGCTCACAAGAAGAAGCATATACATGCGCCAAGACCATACCCATGCTCCCAGTGTGATAAAACATTCAATGAAAGAGGACTGCTGCAGCGACATAAGGATGTAGTGCATAATAAAACACTGAGTTTCCACTGCGAGTATTGCCCAGAGCGGTTCTCATCTGTGACGAAGCTGGCGCGTCACGTGCGCGGCCACGCCGGCGTGAGGCCCTACCCATGCAAGTTCTGCGACAAGAGCTTCATCAAGTCACATCATTACACGAGACATTTGCGCGTGCGTCACCGCAACGAACCCCGTGCGGAGGAGTTCCGCTGCGAGCAGTGCGACATCACGTTTAGCACGCAGGACGAGCTCATATACCACTCCGCCATACACGCCACACAGAGCCTCACCTGCCCGCTCTGCCAGGAGAAGTTTGAGGATGTCGACGCTGTTACTACGCATATCAAGTCCCATGTTACCGGCGACGAATTTATGTGTGACTTCTGCGAGTTGGTGTTCACTGCGCGGGAGAAGCTCGACGCTCACATGATTTGCGCTCACGAGGAGGAAATGCAACAGGATGTTCATGACGAGGCAGCAGAGATGGAAGCGGAAGATGAAGACGAAGACAATGCAATTAACGTAAAAGAAGAGGATGAGAATAACATGGTCATAGAAATAAAGAAACCTGACGAATTTTTGATAAAGGGATCCAATAAGAGTAAAAATATAACTGAAAATGCAAATTCTGAAGAGAGTGAAGCAGAGGCACCGCCAATTGAGACGCCAATTACCACAACAGTAATAAAGAAACCGCCAATCACGATACTGTCGGAGCAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGAAGAATGAAACACCCAGCGAATCTCCCAAGCCGCCAGCGAAAAAGAGCAATACTCAGTTACTGGATATCGTTTGGTCTGAAGAAGAAAAGGAACCCAAATTAAAACCTGAACAACATACGGAAGTTGTTGCAGTGAAAAAAGAAAAGCCATTGACTAAAGTTGAAAGCAGCTCCGGCGTAGGAGACAAAACATTACGACTCTTGGAGAAAGAATTACAAGATCTGAAACGGACAAACTCTTCAAAGACTCCAGCTAAACCAACCGACGCGAACCTCAAAAACAGAAGACCACTGCACACTTCTACACCAAAATTAAAATCTAGTGAAGAGAAGAAGTCTACGAAAGGAGTCATATCTAAGAAAGTGCCTACCAAAGAAAATAAAGAGCCCAAGGAAGTTAAAGAGAAAGAACCAAAAACCAATGGCAATGAGAAAGAAGAAAAAGAATCAAAGTCGCTACTCAAAAATGGCGGCAACTCGAGCGACAAGAGTGCGGACGAGGGCGTCCGTCGGTCCACGCGGCCGTCCAAGATCAGGAACTACGCGAAGATGGTGCGCGACAAACCGCAGGCGGAGTCAGACGACGATACCGAGGACGATGATGATGAGGAGTACACGGAAGTCGAGTCCCGTCCGCGCGGCCGGCGGCCGAGCGTGAAGCAGTCGCCGAAGCCCGCGGCCCCGCCTACCGCCACTCCCGCCGCGCCGCCCAGGAAACGCGGACGACCGCGGAAAGACGTCACGCCTGTACCGGCTAAAGTGAAAAAAGAGTCTGAGGGGTCAGATGAAGAGAAGGGAGAACCAAGCAGTAGTAAGCTGAAAGACTTACTGGAAGGAAATAAGCCGTCAAACAGTACCCCAGAAGTGAAGTCACCACCGCCTATGATGGTCTATCCAGGTGGACAGACGCTCAAAAAGGTCCCCATGAAGGCATTACCGCCTGGAGTGAAGCCGCTGCCTTTACCAGCGAATGCTAGACCTGTTACCTCCGGCGACCTGTGCGAAATGCAAATTGGCAAGAAAGTTGTGAAGGTCCAGAAAATAGTCATGACTCGAGCAGAAGTGGAAGCTATGGCTAAGAAGGGACTTGTTGAAATGAAGGATGGGACAATGGTGCTGAAGCAGGGTATAAAGTTACCGACCTCAGACCCAGCCAACATCAAGTCTACCTTAGTAGGCGAAACTAGCGAAGCACCCAAAGAAGCGTCGCCCAAAAAGGACATACCTAAAGCGGCCCCGACTCGGTGCGATCTAGACGAAGTTTAG
Protein Sequence: MEKRKENISARKICRFCLTXXXXXXXXXXXXXXXKDSVNLHLKILTCISVEVFPSDKMPCYICQRCNTLMNLFYEYKHIVRQADENILHYIQTGTTLEPIKWSSSLIKASKTSKEVIMKTVVEGGATVQVSSQDASDSEEEEYSNVYNVKIGDGIDSEEKTACIKVVSAKASDSIKPSRTNKEAVRSEKNSIEGCWPCDECDCTYPLQQLLDLHKTQKHRARTVKCDKCDAKFFNKYDLSTHLVRHSDEMPFQCVACGKRFKRNILLKRHEKFIHADLPQHVCSKCPASFLSLEEFKAHKKKHIHAPRPYPCSQCDKTFNERGLLQRHKDVVHNKTLSFHCEYCPERFSSVTKLARHVRGHAGVRPYPCKFCDKSFIKSHHYTRHLRVRHRNEPRAEEFRCEQCDITFSTQDELIYHSAIHATQSLTCPLCQEKFEDVDAVTTHIKSHVTGDEFMCDFCELVFTAREKLDAHMICAHEEEMQQDVHDEAAEMEAEDEDEDNAINVKEEDENNMVIEIKKPDEFLIKGSNKSKNITENANSEESEAEAPPIETPITTTVIKKPPITILSEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKNETPSESPKPPAKKSNTQLLDIVWSEEEKEPKLKPEQHTEVVAVKKEKPLTKVESSSGVGDKTLRLLEKELQDLKRTNSSKTPAKPTDANLKNRRPLHTSTPKLKSSEEKKSTKGVISKKVPTKENKEPKEVKEKEPKTNGNEKEEKESKSLLKNGGNSSDKSADEGVRRSTRPSKIRNYAKMVRDKPQAESDDDTEDDDDEEYTEVESRPRGRRPSVKQSPKPAAPPTATPAAPPRKRGRPRKDVTPVPAKVKKESEGSDEEKGEPSSSKLKDLLEGNKPSNSTPEVKSPPPMMVYPGGQTLKKVPMKALPPGVKPLPLPANARPVTSGDLCEMQIGKKVVKVQKIVMTRAEVEAMAKKGLVEMKDGTMVLKQGIKLPTSDPANIKSTLVGETSEAPKEASPKKDIPKAAPTRCDLDEV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01217772;
90% Identity: iTF_01217772;
80% Identity: -