Basic Information

Insect: Aricia agestis
Gene Symbol: -
Assembly: GCA_905147365.1
Location: LR990259.1:14650998-14655052[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.0033 0.23 12.4 2.1 3 23 31 51 30 51 0.98

2 14 0.00012 0.0083 16.9 0.7 1 23 89 112 89 112 0.92

3 14 1.7e-05 0.0012 19.6 0.6 1 23 114 136 114 136 0.97

4 14 1.5 1.1e+02 4.0 0.0 1 23 171 193 171 193 0.86

5 14 4.5 3.2e+02 2.5 0.6 3 19 220 236 219 238 0.93

6 14 0.0085 0.6 11.1 1.0 1 23 248 270 248 270 0.94

7 14 0.00026 0.018 15.9 0.2 1 20 276 295 276 297 0.95

8 14 0.034 2.4 9.2 4.0 1 23 309 332 309 332 0.97

9 14 0.028 2 9.5 3.0 3 23 339 361 337 361 0.89

10 14 4.7 3.3e+02 2.5 3.3 3 23 367 387 367 387 0.96

11 14 0.0044 0.31 12.0 0.3 1 23 392 414 392 414 0.96

12 14 1.7 1.2e+02 3.9 7.0 1 23 420 442 420 442 0.97

13 14 3.1e-07 2.2e-05 25.1 3.9 1 23 448 470 448 470 0.96

14 14 1.6e-05 0.0011 19.7 0.9 1 23 476 499 476 499 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.0033	0.23	12.4	2.1	3	23	31	51	30	51	0.98
2	14	0.00012	0.0083	16.9	0.7	1	23	89	112	89	112	0.92
3	14	1.7e-05	0.0012	19.6	0.6	1	23	114	136	114	136	0.97
4	14	1.5	1.1e+02	4.0	0.0	1	23	171	193	171	193	0.86
5	14	4.5	3.2e+02	2.5	0.6	3	19	220	236	219	238	0.93
6	14	0.0085	0.6	11.1	1.0	1	23	248	270	248	270	0.94
7	14	0.00026	0.018	15.9	0.2	1	20	276	295	276	297	0.95
8	14	0.034	2.4	9.2	4.0	1	23	309	332	309	332	0.97
9	14	0.028	2	9.5	3.0	3	23	339	361	337	361	0.89
10	14	4.7	3.3e+02	2.5	3.3	3	23	367	387	367	387	0.96
11	14	0.0044	0.31	12.0	0.3	1	23	392	414	392	414	0.96
12	14	1.7	1.2e+02	3.9	7.0	1	23	420	442	420	442	0.97
13	14	3.1e-07	2.2e-05	25.1	3.9	1	23	448	470	448	470	0.96
14	14	1.6e-05	0.0011	19.7	0.9	1	23	476	499	476	499	0.97

Sequence Information

Coding Sequence: ATGGCTTCGCTTTCCCATTTAGACCCTGATAGCTCAACACCGAGGCTGGCACCAAAACAAACTACAATTGATTTGATAGGCGGTATACTGTGCCATATTTGTCGTTTAACATTTCCTGATAAGAAAAATTATGACAAGCACTACAGTATACATGAAAGTGACAAAACCAAAATAATCTACACATGTGTGGTATGTTCCAAAGAAATAGCCGGATACCCAAGTTTCCGTGGCCATTGTTACACAACACATGTTATGAAAGAAAAATACAAATGTGAGATATGCAACAAAACTTTTGCAAAAGTGACCTCTCTTAGGGAACACAAGATTGCCAAGCACTCATTTAAATGTGGAACATGTGATAAAGAATTCAATTCCAGTAAGGAGCTGCAAGTTCACAAAATTATACACACCCAGACCGACACACCACCATACAATTGCCAAATGTGTAACACCAAAATTGATTCCATAGAAGGCTGCCACGACCATGTAGATTTGCACTGCAAAAATATTTACTCATGCCCAGTGTGCAACGAGAATATACCAGACATCAACAAAGCAGTTGATCACCTGAAAATCCATTTCGATGAGGAGGCTGATGATATAAACGCAAATCATAATGATAAGTCCGATAAAATTGAAAAAATGGGGGGAATATTGTGCTCATTATGTTCTCATGCATATAAAAACCGAATGGAGTTTGATGCACATTTCTCTTGCTGCCATGGAGATGAGGATGTGCTCTACACTTGTGTTGTGTGCGGAAAACAGTTTGAAAAATACTCAGTCTTCAATCAGCATGCCTATAACCATGTCACTAAGAACAAATTTGAATGCAATATATGCTCCAAAACCTATCCGCGCATCTCCCTACTTGTTACACATATGGCCCACTGCCAGAAGGACAACAGCGCAACCGGCAAACCATTTGTTTGCCACAAGTGCAACCACAGATATGGTACCGAAAATCGCCTTCGTCTGCATTTAAAAGTCGAACATAATATATTCCAGATGGAATGTCTAGAAGAAGGCTGTGGAAAAAAATTCAAAACATCTTGTGAATTGATATTCCACCAAAGACACCATTCTAAGGCGAAGTGGTGCGGTCAGTGCGGCTACCTCTTCACATCTCTCCACACGTGTCAGTCACACCTCGACGTGCATAAGAAGCTACTGTTCATTTGTCCGATATGCAATCGCAATTATTCCGAAAAGAATAGCATTCTGAATCACGTCAACCAACATTTCGAAACGCTACTCCACATGTGCAAGTTCTGTTGCAAAGTTTATAACGCCAAAAATCGTCTCAAGGAGCACATGAAGACACATTCCGATAACAAAATTCACGCCTGCAGCTACTGCGGCAAGAGCTTCGTGAGACTGAGCCACCTGCAGCAGCATCTGAACACGCATACAGGGGCGAAGCCATACAGTTGTCCGGTTTGTCCGAAATCGTTCTCGTCGCTACCCAACTGGAGCAAACATCTGCATAGAATGCACAAAGTTAATGGAAGTCAGTATAAAAAGGAATTCGAGGCTGTAAAAGCTAATGCGATTGAAAATTATGATACAGATACAGTTGACAAAAAATATGAAAATATGGATATAGGGGAAGCAAAATTAGACAGTTCCGAAATGGATGTTTGTGAAGAAAAATCAACAGGAAATAGTAACTCATTATTAGAAAACACGCAATCGCGTGAGCCTGACAACAGTGCAGCGGAGACTGACATCATCGATCATTGGCTCATCGAGAAAGAATTAATACACTTTGAAAACAATTTCAATAAGGAAAACAGTATCATCCAAAATGTTGATATCTCATCGACGACAGAAGATCTTATTCGGACCTTGGAGGCGGACATACAACAGATTCCTCAAACTAACTACCCTCCCGAATATGGTCCCGAATTCAACATAGGCCCCGAGTCCGGGAGCAGCAGCGGCTTCATAAATCTGGATGACCACAACCTGCCTCACATCGATCCCCTGCTAACGATTAAAATTCAGGAGCATAATCAAATCTATAAAAACATGCCAGCAGATTTCGTACCAAATATTGAGTATATCAACTACGATGCTCCGAAATGGGAACCACCGATCCTAAAAAAGGAGGACACTTTCGAAACCAACAACAAGCTGATGTTATGGAACGGTGATCATTTTGAAGTTTTTACATAA
Protein Sequence: MASLSHLDPDSSTPRLAPKQTTIDLIGGILCHICRLTFPDKKNYDKHYSIHESDKTKIIYTCVVCSKEIAGYPSFRGHCYTTHVMKEKYKCEICNKTFAKVTSLREHKIAKHSFKCGTCDKEFNSSKELQVHKIIHTQTDTPPYNCQMCNTKIDSIEGCHDHVDLHCKNIYSCPVCNENIPDINKAVDHLKIHFDEEADDINANHNDKSDKIEKMGGILCSLCSHAYKNRMEFDAHFSCCHGDEDVLYTCVVCGKQFEKYSVFNQHAYNHVTKNKFECNICSKTYPRISLLVTHMAHCQKDNSATGKPFVCHKCNHRYGTENRLRLHLKVEHNIFQMECLEEGCGKKFKTSCELIFHQRHHSKAKWCGQCGYLFTSLHTCQSHLDVHKKLLFICPICNRNYSEKNSILNHVNQHFETLLHMCKFCCKVYNAKNRLKEHMKTHSDNKIHACSYCGKSFVRLSHLQQHLNTHTGAKPYSCPVCPKSFSSLPNWSKHLHRMHKVNGSQYKKEFEAVKANAIENYDTDTVDKKYENMDIGEAKLDSSEMDVCEEKSTGNSNSLLENTQSREPDNSAAETDIIDHWLIEKELIHFENNFNKENSIIQNVDISSTTEDLIRTLEADIQQIPQTNYPPEYGPEFNIGPESGSSSGFINLDDHNLPHIDPLLTIKIQEHNQIYKNMPADFVPNIEYINYDAPKWEPPILKKEDTFETNNKLMLWNGDHFEVFT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00935140;
90% Identity: iTF_00935140;
80% Identity: -