Aage006285.1
Basic Information
- Insect
- Aricia agestis
- Gene Symbol
- -
- Assembly
- GCA_905147365.1
- Location
- LR990259.1:14313469-14320798[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 4.3 3e+02 2.6 0.3 2 23 6 27 5 27 0.94 2 14 0.2 14 6.8 0.2 1 23 990 1013 990 1013 0.93 3 14 7.9 5.6e+02 1.8 0.2 1 23 1091 1113 1091 1113 0.84 4 14 1.6e-05 0.0012 19.6 1.7 2 23 1116 1137 1115 1137 0.97 5 14 0.00019 0.013 16.3 2.7 1 23 1143 1165 1143 1165 0.98 6 14 0.0051 0.36 11.8 4.3 1 23 1171 1193 1171 1194 0.96 7 14 0.34 24 6.0 0.1 6 23 1208 1225 1207 1225 0.98 8 14 0.0017 0.12 13.3 0.7 3 23 1232 1253 1231 1253 0.97 9 14 0.0021 0.15 13.0 0.1 2 23 1270 1290 1269 1290 0.97 10 14 0.0017 0.12 13.3 3.1 1 20 1296 1315 1296 1318 0.91 11 14 0.00022 0.016 16.1 0.4 1 23 1326 1348 1326 1348 0.98 12 14 0.0085 0.6 11.1 6.9 1 23 1354 1376 1354 1376 0.98 13 14 6.5e-06 0.00046 20.9 1.3 1 23 1382 1406 1382 1406 0.98 14 14 0.001 0.071 14.0 5.1 1 23 1412 1434 1412 1435 0.95
Sequence Information
- Coding Sequence
- ATGGATCAGAGAGTGCAATGTCCAGTGTGTACATTGTACCTACACAGTGGTATGTCCTTGGAGTCACATCTGGATACACATCCTAAGGACCAGGTGATAAAAGCTTTGTGCTCCTTATCCGCTAGAAGTTCAACATTTGGAAGTCGTACTTCAACACCCACTCAATCGGAAAGGTCATACAGAAGTCGATCTCGTACACCAGCAAACGAAGAAAGTGTAAGATGGATGACAACACATAAAAATAGCGAAAATGAAAGGTACTGGAGGAGGACTCCAAGTCGGACAAAATCTACACCCTTCTCATATAATACCTCAAGAGTTGGTACTCCAGAACTCAGGATGGGAAATTTATCTTTTGATAATCACAATTTTGCTAATAACAATGGTTCTGATCCATATACAATAAAGATAGATAAAACGCAACAAACACATACCTCAATAAACACTCGGCAGGAATCCGAGTTTGAGCAACAATTTCCTTACTATTCAGAACAAAATGACGATCCTGAAATCAAATATTCAAGAAGTTCAGAGTATACTGGAATTGACAATTCAAATAATATATTTACCTACAACATGCCTACAATTGCACCCAATTTAAAATTACAAGCTACTATGGTACCATCCACATCGAAAAAGTCTGCCAATGTGGTGAAAATATTACCAAAACCAAGTAACATCCTGGTTAAAACAAATGTTGCAGGGGTACAGTATATTCCACCTGGTGTAAAACCTTTACATGTTGTATTACCGACATCAACATCATTTGTTCAGAAGACTTTGCCAAATCATATGATAATGACGGGTAATTTAGCAAGCGCCCCCATACTGGACCCCAAGTCTGTAGCACAGCCATTAGCAAACCAGTTTGAACAGCTGACTACAAATTCAGTGACTCCTGGAACTACAGTTGTTACACAAAACTCACAGATTATTTACCGAGAAATGGTGCACAACCTGGATGGTAAACCTTTCATCTCCAGTATGCCAGCCGTGCTCGGAACCCATGAAAATGTTACAAATGTTGCTCAAAGTAATTCAATATACCAGAATGTGATGGTGGTTGATCAGTTTGGCAATACATCTTGCATGTATACTACACCTCAGCCCCTGCTGTCTAAACCTTGTCCTACAACTATTTTCAATAGTAATCTCACTAGTATACCCCATTCAGTCAAACAAGTGCCTCAAATGCTCAATAATGCAAATGAAACTCTTATTATTGATGTAAATCCTTTAGTACCTTCGACATCAAATAACATCAGTAATAATGCTGGTCCCAGCTCTTCTCATGAAGGAAGAAATAAAAATGCTTCACTAATAAAGGCAGAAGAAAAGGCTGACAGTAAAATAGATTCATCAGTGAATTGTAAGGGCTTGAAAATTCTTAGTAATGTCAAGGTAGAAGTTCCAGTCCAACACCATAAAAATATGTTGAACACAGTCCTTGATCTTACAGGACCAAATGAGTCTGAATATACACAAAGACCTTTGACTCCAGAGAAAATTTTACCAGACTTAGATGACAATCTCAATATGCCCGATGAAGGTGCCCCAGCTTCAAATGGTGAAAGCTTCTCTTCTCATACATTTTCTGTCATCAAAAATGTGGGAAATCCACCATCTTATAGGGAATCATCTAAAACAAACATAAGTCACAAACTAGAAACAGAATTTTCGGATAGTTGTCCAGTTCCTGATTTAACATGCAATGAAAAACCTTCAATATCTCCTTGTAGTGAACTTTCGGAGCATGGTGAAAGTGCAACAGATCCTGCACCTATAACTCGAAAACAAGAAATAAATAATGAAACTAAAAGTAGCACCGAAGGAAAGAAATCTCCTACAAAGCTAGTAAGAAATATGCCCTTACCTCTCAATAATATCTATGTCAAGAAGCACAAGAAAATATTGCAAATAAAAAACTCGAAAACATGCCCTCCATCAACAAGTACAAGTTTGGAATTTGAACCTAAAGCATCATCTTCAAAGTCCCTATCATCTGAAAATTTCACCTTGAGTGATATTGGTAAAAATGAGGAGGAGTGTTTTAAAAAAAGTTTTTTACAAACTATATCTATTGAGAAAATTGAAAACCAGCAGGAGGCAGATAATCAAACTGAGTTTGATGCAGATACTGAGGAACGCTCCATGGACATAGAGCCTGTAGCTTCCTCCAGAGACCCAGAATATCCTAATCCTACAGAAATAGTTAAAGTAAAGGAAGAAGTTAACTCCAGTAATGACTTCAGCAATGAGGGAGCTCGGTCATGCGGAGAAATTGCACCAATGGAGACATTAAGGCCAATAAATGTTATAACTTATGGAAATATGGTCCCTGAAAATTTTGATGAGGACTCCAACCACAGGGAACTTCTCGAATTGGAAGCAGCATCTAAAAACAAGCAGTTTGTAAACATGATGAATGATAATTACTTTGGGGATAATATTTATGCAGACTACTTTACCCCAGATCGTGTAGAAAGTTTTGAAGCTGAAAAAGAGTCGCACTATAACAAAGAAAATACAAAAGATCCCATGTACATGTGGGGTGAACCTTCTCAGAAAGAAAGCGAGTTTGTGCTGCCCAATTTCATACATGAAAGCTACAGAATAGCAGAAAGTAGCGAGGCCGATTATTCTGAATTGACTACAGTTGATGTTCAACTGGATAATGATGCAGATAGATGTGACATAGATAATAAAGCTGACGTTCTTAGTGAGAGTAGAAGCGAAGGGGAACCAATTCTCAATATCTGTACCGATGAGAGAATGCCACCTCGAGGAGAGCTCAGTGGACAGGAGAGTAATGGTGACTTGGAGTCTACTTGGGGTGGGATGTATGCTGAAGTACCTCCTGCCGAGCCCTACGACTTGATGGCCCGTGAGAGCTGGGTATCCGATGGCTCAGATGTGGACACCAACGAAAAATTAGACGCTCTGGACGACTTCCCGAAGACAAAAAGTTATAGTTGTTCGCAATGTGCCGTGAAGTTCCCGTCCCTGAAGGAGCTACGGGGCCACAAGTCGCTGGCGCACGCGCTGCCCACGTGCTCCACCGCCAAGACCAGCTACAGCCGCCTCGTCACCTCGCGAACTATCAAGAAGGAAGTCAAACAAGACGAAGTCTCTTTGTCTAGTAATCTCATGGTGTTGGAGTCGAAACGGGCGATCACGACGACAATTCTACAAGCGTACGACGTGTTGGGCGAGGCTAAGCCCAAGATCGAGGGTCTTATCAAACAAGAGAAGAAGAGAAAGCGTAGGGACTATGTGTGCCCTACGTGTAAGGAAGACCAAGGGACGGATGCTGCGTTCCACGCACATCTCAAGATACATCCTCTGGAGTGCCTCACCTGTGGAAAGTGCTTCTTCAGACGAGCGAACCTGGCGCTGCACATCAAAACACATCTGGGAATAAAGAATTATAAATGCGACATATGCGAGAAGCGGTTTATCACGCGGCAGAAGCTGAGCGAGCACCACAACATCCACACTGGCCGAGCGCCATTCAAGTGCACCATGTGCGACGACACCTTCCGCCGCTACTCCAACATGGTGCAGCACAGGGACCGACACCACCTGAAGAAGAAGGCGCGCGTGCGGGACTTCGTGTGCGCGTGCGGGCTGGTGTTCCACTCGGCGGCGAAGCTGCTGTGGCACCGCGAGACGCACGACGAGCGGCCCAAGGCGTGCCCGTACTGCTCCGACAAGTTCGTGCACGCCGCCTCCCTCACGCGCCACGTGCGCCGCTCCCACAACGCGCTCTACGTCAGCGAGCGCCTGCGCGGCAAGGTCGACAACGTGCCGTGCCCCGTCTGCAAACAGGTGTATCTCCGGACTAATCTCCGAGCGCACATGCAGACGCACAGCGGCAAGCGGAACTTCCACTGCGTGATATGCAACAAGTACTTCACGACCAAGTGGAACCTGAAGCTGCACCGCTGGACGCACATGAGCCGCTCGGCCAAGCCGTACAAGTGCACGCTGTGCAAGGGCGCCTTCATCCGCCAGTCCGAGTACATCTCGCACATGAACGCGCACAAGTCCGTCCGCCCGTACACCTGCAACTACTGCGGTTGCCAGTTCATCCGCAAGACGAACTGCCAGCGCCACGTCCGCGAGCACGAGATGGCCAAGAAGTACGTGTGCAAGGTGCCCGAGTGCGGCAAGTCCTTCCACCGCAGCTACTACCTGTCCGAGCACATGAAGGTGCACAGCAACTCGCGCCCCTTCTCCTGCAACATCTGCGGCAAGACCTCCAGCAACAAGTCCAACCACAACAAGCACGTCAAGATCCACCACGCCCGGGAGCCCATCGCCACGGAGGCGTAA
- Protein Sequence
- MDQRVQCPVCTLYLHSGMSLESHLDTHPKDQVIKALCSLSARSSTFGSRTSTPTQSERSYRSRSRTPANEESVRWMTTHKNSENERYWRRTPSRTKSTPFSYNTSRVGTPELRMGNLSFDNHNFANNNGSDPYTIKIDKTQQTHTSINTRQESEFEQQFPYYSEQNDDPEIKYSRSSEYTGIDNSNNIFTYNMPTIAPNLKLQATMVPSTSKKSANVVKILPKPSNILVKTNVAGVQYIPPGVKPLHVVLPTSTSFVQKTLPNHMIMTGNLASAPILDPKSVAQPLANQFEQLTTNSVTPGTTVVTQNSQIIYREMVHNLDGKPFISSMPAVLGTHENVTNVAQSNSIYQNVMVVDQFGNTSCMYTTPQPLLSKPCPTTIFNSNLTSIPHSVKQVPQMLNNANETLIIDVNPLVPSTSNNISNNAGPSSSHEGRNKNASLIKAEEKADSKIDSSVNCKGLKILSNVKVEVPVQHHKNMLNTVLDLTGPNESEYTQRPLTPEKILPDLDDNLNMPDEGAPASNGESFSSHTFSVIKNVGNPPSYRESSKTNISHKLETEFSDSCPVPDLTCNEKPSISPCSELSEHGESATDPAPITRKQEINNETKSSTEGKKSPTKLVRNMPLPLNNIYVKKHKKILQIKNSKTCPPSTSTSLEFEPKASSSKSLSSENFTLSDIGKNEEECFKKSFLQTISIEKIENQQEADNQTEFDADTEERSMDIEPVASSRDPEYPNPTEIVKVKEEVNSSNDFSNEGARSCGEIAPMETLRPINVITYGNMVPENFDEDSNHRELLELEAASKNKQFVNMMNDNYFGDNIYADYFTPDRVESFEAEKESHYNKENTKDPMYMWGEPSQKESEFVLPNFIHESYRIAESSEADYSELTTVDVQLDNDADRCDIDNKADVLSESRSEGEPILNICTDERMPPRGELSGQESNGDLESTWGGMYAEVPPAEPYDLMARESWVSDGSDVDTNEKLDALDDFPKTKSYSCSQCAVKFPSLKELRGHKSLAHALPTCSTAKTSYSRLVTSRTIKKEVKQDEVSLSSNLMVLESKRAITTTILQAYDVLGEAKPKIEGLIKQEKKRKRRDYVCPTCKEDQGTDAAFHAHLKIHPLECLTCGKCFFRRANLALHIKTHLGIKNYKCDICEKRFITRQKLSEHHNIHTGRAPFKCTMCDDTFRRYSNMVQHRDRHHLKKKARVRDFVCACGLVFHSAAKLLWHRETHDERPKACPYCSDKFVHAASLTRHVRRSHNALYVSERLRGKVDNVPCPVCKQVYLRTNLRAHMQTHSGKRNFHCVICNKYFTTKWNLKLHRWTHMSRSAKPYKCTLCKGAFIRQSEYISHMNAHKSVRPYTCNYCGCQFIRKTNCQRHVREHEMAKKYVCKVPECGKSFHRSYYLSEHMKVHSNSRPFSCNICGKTSSNKSNHNKHVKIHHAREPIATEA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00262085;
- 90% Identity
- iTF_01217735;
- 80% Identity
- -