Basic Information

Gene Symbol
ZNF219
Assembly
GCA_905147365.1
Location
LR990275.1:6823573-6835685[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 11 1.1 79 4.4 1.0 1 23 232 254 232 254 0.95
2 11 0.0004 0.028 15.3 2.2 1 23 261 283 261 283 0.98
3 11 0.097 6.9 7.8 0.7 1 23 287 310 287 310 0.89
4 11 1.6e-06 0.00011 22.8 3.8 1 23 318 341 318 341 0.95
5 11 0.00013 0.0093 16.8 1.7 2 23 348 370 348 370 0.96
6 11 2.8e-06 0.0002 22.1 0.0 1 23 384 406 384 406 0.97
7 11 8e-05 0.0057 17.5 0.3 1 21 412 432 412 437 0.93
8 11 0.044 3.1 8.9 3.8 3 23 447 468 445 468 0.96
9 11 0.044 3.1 8.9 0.8 1 23 474 497 474 497 0.95
10 11 2.7e-05 0.0019 18.9 4.0 1 23 506 528 506 528 0.97
11 11 0.16 11 7.1 0.0 1 23 534 557 534 557 0.92

Sequence Information

Coding Sequence
ATGGATAACAATAACACAAAAAGTAATAACTTTTGCATAAATTGTTTGAATGCAGATGAAAATACGTCTTTAAAATGCTACGAATTAAGAAATGCGACATTGAAATCGTTATTTCAGACGGAGATCTTAAATGTTTGTTACCTTTGTTCTAAAATATTATACAATGCAGAGGCACTTATAGAAAATGTTTACAACAATCAGAAGTACTTACAAAATCACGAAGAAATTACAGATTCAGTAATACAAGCAGCAAAATTACATACACAACCATTCATAACTTTGTCCCAATGGCACAATATTCTAGAAATAAATCCTGATGATTCAACGGAAGATGACTCAATTTTTGTCTATAGTACAGGAACTGCTAAAGATTCTGTGAAACATGAGGTAAAAGATGAGATTTTAGACTATTTAGATGCAGACTTCATGCAAAATAGTGATTTAGACAACAACATTGAAGAAGATTATTTAGATGTACCATTGATACAATTTACGAAAACGCGAAGAAAAAACTCAAAAAAGTTCAAGAAAAAAATTAAAGTTCACAAGGAGGATGTTAAATTAAAAGAGGACAACCATATCGTCAAATGTGTAAAAGATTCCATAGAATACATTAGATTGAAATTGACAAAGGCACAATGTTTAGAGGAGCTAAGAACTATGGCAGACGATGAACAGTTCAAAACTGCAACATACAAATGCATGGACTGTGTCAAATGGTTTCTATACAGGGATGGCTATGAAAAACATATGACCCAACATGATAAGATAAGCGGCGAATACAAGTGCGATATCTGCAAGCAACGATTTGAGTCCCTTCAAAAATTAATGTCACATAAACAAAGCCATATCGTTAGGTACAAGTGTCCCGTATGTGACCTCACTCGGAGCACGTTCAGGACTATCAGGGACCACTACACCGCGAACCACGCAGGTATACCGCGAGAACAGTTCACTTGTGACCATTGCCGGAAGACTTTTAAACAGCAAGGGTCTCTAAGGAAGCACATGGACTACGCTCATCGCAGCATCTCACCCGCGCAGTGTGACTTGTGCAAGAAGATTTATAAGACGAAGAAAACATTGCAAGCACATCTTATTAGGAAGCACCGGTCGGAACTATCAGCGGGGGAAGCCCCGAGTCGGACGTTCGAGTGTCCGGAGTGCGGCAAGGCGTTCGTCGCGCCGTCGCTGCTGCGTCTCCACATGACCGCGCACTCTAATACCAGAGATTACTACTGCGTCGAGTGTGATAAGAGTTTCAAGTCTGAAATAGGACTGAAGCAGCATTACAAAATTGCTGCGACGCACGCCAATACTGCCGAATTATCGTTCGGCTGCGACCTGTGCGACCGGAAGTTCCGGTGTCGGCGCGACCTGGAGCGCCACAAGAACAGGGAACACCTCCAAAGACGACCCTTCCAGTGCGACAAGTGTGAAAAGAGCTACCTGTCACTGTGGAGCATGTCGGAGCACAAGCGGCGCGCGCACGAGGGCTACAAGCGACCCTTCGACCACCACTGTCCCATGTGCGACAGAGTGTTTGACCGTAGCACAACAATGCGGATGCACATCAGGACGCACACGGGCGAGCGGCCGTACAAGTGTCCGCGGTGTCCGGCGGAGTTCGGCCAGGCGGGCGTCCGGAGCACGCACATCAAGCTCGTACACCTCAAGCTCACGAGGGACGGCCGGCCCAAGACATCGGTGACTGTTAAGTAA
Protein Sequence
MDNNNTKSNNFCINCLNADENTSLKCYELRNATLKSLFQTEILNVCYLCSKILYNAEALIENVYNNQKYLQNHEEITDSVIQAAKLHTQPFITLSQWHNILEINPDDSTEDDSIFVYSTGTAKDSVKHEVKDEILDYLDADFMQNSDLDNNIEEDYLDVPLIQFTKTRRKNSKKFKKKIKVHKEDVKLKEDNHIVKCVKDSIEYIRLKLTKAQCLEELRTMADDEQFKTATYKCMDCVKWFLYRDGYEKHMTQHDKISGEYKCDICKQRFESLQKLMSHKQSHIVRYKCPVCDLTRSTFRTIRDHYTANHAGIPREQFTCDHCRKTFKQQGSLRKHMDYAHRSISPAQCDLCKKIYKTKKTLQAHLIRKHRSELSAGEAPSRTFECPECGKAFVAPSLLRLHMTAHSNTRDYYCVECDKSFKSEIGLKQHYKIAATHANTAELSFGCDLCDRKFRCRRDLERHKNREHLQRRPFQCDKCEKSYLSLWSMSEHKRRAHEGYKRPFDHHCPMCDRVFDRSTTMRMHIRTHTGERPYKCPRCPAEFGQAGVRSTHIKLVHLKLTRDGRPKTSVTVK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00935077;
90% Identity
iTF_01217802;
80% Identity
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