Basic Information

Insect: Aricia agestis
Gene Symbol: -
Assembly: GCA_905147365.1
Location: LR990258.1:16496401-16498044[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.00032 0.022 15.6 1.7 1 23 255 277 255 277 0.99

2 9 0.029 2 9.4 5.2 1 23 283 306 283 306 0.95

3 9 0.0015 0.1 13.5 0.2 2 20 313 331 312 333 0.93

4 9 2.3e-07 1.6e-05 25.5 2.0 2 23 353 374 352 374 0.97

5 9 6.6e-06 0.00047 20.9 1.7 1 23 381 403 381 403 0.98

6 9 4.5e-05 0.0032 18.3 0.2 1 23 409 431 409 431 0.97

7 9 6.9e-06 0.00049 20.8 2.1 1 23 437 459 437 459 0.96

8 9 1.9e-05 0.0013 19.5 4.0 1 23 465 487 465 487 0.98

9 9 3.9e-05 0.0027 18.5 5.8 1 23 493 516 493 516 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.00032	0.022	15.6	1.7	1	23	255	277	255	277	0.99
2	9	0.029	2	9.4	5.2	1	23	283	306	283	306	0.95
3	9	0.0015	0.1	13.5	0.2	2	20	313	331	312	333	0.93
4	9	2.3e-07	1.6e-05	25.5	2.0	2	23	353	374	352	374	0.97
5	9	6.6e-06	0.00047	20.9	1.7	1	23	381	403	381	403	0.98
6	9	4.5e-05	0.0032	18.3	0.2	1	23	409	431	409	431	0.97
7	9	6.9e-06	0.00049	20.8	2.1	1	23	437	459	437	459	0.96
8	9	1.9e-05	0.0013	19.5	4.0	1	23	465	487	465	487	0.98
9	9	3.9e-05	0.0027	18.5	5.8	1	23	493	516	493	516	0.98

Sequence Information

Coding Sequence: ATGGCAGAAGAAGAAACATATTGCCGTTTGTGCGCGGAACCAACTCCTATCAACCAACTTATAAGTCCTGACGAAGACGTCGCTATAAACTCTAAAATATCTACTAAATTGTCCTGGATAAACATCGATATATCCTCAAAAAACAGTCTCCCTAAAACTATATGCTTCTCATGCTTCGATTTATTAGAGAGAACGTGGTCCTTTCTACAAAACGCTCGAGATGCACAAGAAAAACTGTCGAGTATATTTATCAAAAAACCAAGCAAAGATAACTCAAATCGAACGAGAAGAAGTCACACGAGTAATTCCAACACGAACATTCCTGGCAAACCTGTCGACAGTGATTGGGAAGAGTTCCAAGAGCTAAAGGTTGAAGTTAAAGTGGAGAAAGTCGACACCGACGGTAACGCACCTGTTTGCTCACGGAAATTAAAAAAAAGTTCACCATTATCTGTTAAATCTGAGGACGACTCCGACGAGTTCAATCCCAACAACTTCGTCAGCGACTCCGATTCTCACGACTCCTCCGACAGCGATGTACCCCTAGAAGTAACCGCAAAGAAGAAGAAATCTCGTAAGAAAACTGTTAACGAAGAATTAGTAATGCTAGAAGATATAAAGTCTGAGATTCCATTAGAAATACTAGCATCAAATATCACATGGGAAAACCAACCATGCCAGTGTGCAAAGTGTGACGCCCAATGTGAGAACATCACAATTCTGCAGCTACACTCCCAGCAAATACATGACCAATGCTGCAGCTTCAAATGTTTGGAGTGCAGCTATGTAATAAAGACCTTCAAGGCCTTCATCCGTCACATGAGAACTCACAACAATGCCCTGAGACACTGCTGCGAATATTGCAACAAATTGTTCATACTGACATCAGAACTTCGACAGCATCGGAGCAAACTTCATTCTGGAGCATTAAAAATGAAATGTAAAAAGTGTGGATTGAAATTTGATAGCGTAGAGGATCTAAAGGCTCATAAGCTCATATACGGCAGCAGCGGGAGAAGAAATAATAAGGCCAAACCCCTGAGCGAATTGGATTTAAAGTGCCGGGACTGCGACAAGGTATTCAAGTCCAAGAGCAACCTCCAGCAGCACAAGCAGGTGCACACCGCACGCACCAGGAACTTCTCATGCCACGTCTGCGGGAAGATGTTCTTCACCAAGGGCACGCTGGGGAGCCACATACTGACCCACAATGATGCTAAGCCCTTCAAATGTGACTACTGTCCCCTGGCTTTCCGAGCCCGAGGTAATCTCATGTCCCACATCAGCTTACATTCAGGTACTAAACCATTTGTTTGCGAACAGTGCGGCAAGAGCTTCCGAGTTAAACGTCACCTGAAATCTCACTCCATAGTTCATACGGACCTGATGCCTTACACATGCGAGTATTGCAACAAGTCATTCCGCTTCAAAACTAGACTGAATCTCCATCTAAGACAGCACACAGGAGCCAAGCCCTACAAGTGTGTGTACTGCCATAGAGACTTTACAAATGGCTCCAACTACAAAAAGCATATGAAGAGAAGACACAACATTGACACCTCAAAACAAAAGTTTGATAATATTGTGCCAGATAAGGAGGAGCCCGACATCAAAGTCAGCATTCAGTCCACCTATCCAGAGTAG
Protein Sequence: MAEEETYCRLCAEPTPINQLISPDEDVAINSKISTKLSWINIDISSKNSLPKTICFSCFDLLERTWSFLQNARDAQEKLSSIFIKKPSKDNSNRTRRSHTSNSNTNIPGKPVDSDWEEFQELKVEVKVEKVDTDGNAPVCSRKLKKSSPLSVKSEDDSDEFNPNNFVSDSDSHDSSDSDVPLEVTAKKKKSRKKTVNEELVMLEDIKSEIPLEILASNITWENQPCQCAKCDAQCENITILQLHSQQIHDQCCSFKCLECSYVIKTFKAFIRHMRTHNNALRHCCEYCNKLFILTSELRQHRSKLHSGALKMKCKKCGLKFDSVEDLKAHKLIYGSSGRRNNKAKPLSELDLKCRDCDKVFKSKSNLQQHKQVHTARTRNFSCHVCGKMFFTKGTLGSHILTHNDAKPFKCDYCPLAFRARGNLMSHISLHSGTKPFVCEQCGKSFRVKRHLKSHSIVHTDLMPYTCEYCNKSFRFKTRLNLHLRQHTGAKPYKCVYCHRDFTNGSNYKKHMKRRHNIDTSKQKFDNIVPDKEEPDIKVSIQSTYPE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00406111;
90% Identity: iTF_01248446;
80% Identity: -