Basic Information

Insect: Aricia agestis
Gene Symbol: -
Assembly: GCA_905147365.1
Location: LR990275.1:1078259-1084756[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.00035 0.025 15.5 2.8 1 23 290 312 290 312 0.96

2 10 0.59 41 5.3 6.2 1 23 318 340 318 340 0.98

3 10 1.5e-06 0.0001 22.9 1.2 1 20 346 365 346 368 0.93

4 10 0.086 6.1 7.9 2.5 1 23 374 396 374 396 0.95

5 10 2e-05 0.0014 19.3 2.8 1 23 402 424 402 424 0.99

6 10 0.00011 0.0079 17.0 0.9 1 23 430 452 430 452 0.96

7 10 0.00033 0.023 15.6 4.0 1 23 458 480 458 480 0.97

8 10 1.6e-06 0.00011 22.8 5.0 1 23 486 508 486 508 0.99

9 10 3.8e-06 0.00027 21.7 0.8 1 23 514 536 514 536 0.98

10 10 1.3e-07 9.1e-06 26.3 3.3 1 23 542 564 542 564 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.00035	0.025	15.5	2.8	1	23	290	312	290	312	0.96
2	10	0.59	41	5.3	6.2	1	23	318	340	318	340	0.98
3	10	1.5e-06	0.0001	22.9	1.2	1	20	346	365	346	368	0.93
4	10	0.086	6.1	7.9	2.5	1	23	374	396	374	396	0.95
5	10	2e-05	0.0014	19.3	2.8	1	23	402	424	402	424	0.99
6	10	0.00011	0.0079	17.0	0.9	1	23	430	452	430	452	0.96
7	10	0.00033	0.023	15.6	4.0	1	23	458	480	458	480	0.97
8	10	1.6e-06	0.00011	22.8	5.0	1	23	486	508	486	508	0.99
9	10	3.8e-06	0.00027	21.7	0.8	1	23	514	536	514	536	0.98
10	10	1.3e-07	9.1e-06	26.3	3.3	1	23	542	564	542	564	0.99

Sequence Information

Coding Sequence: ATGGATAAGGATATCCCTAAAGAAAGTTGTGATTTGTGTTTGATAGAAGGCCGGCGAGTTGTTAATATTAAGAACACTTATTTGCACCCTCTCTATGAGAAACTTTCGAATATGAAGATTGAAAGTGAGACATGCTGTATGTGCTATATCTGCCATACGAGATTGCGACAATGCCACCAGCTGTGCGTGCTGGCGGAACGGAGTACTCGTAGGCTGCACATGGCCTTTATTGATCCTCTCGAGGTTGTCGGTAAATCCAAAGACAAGTCCCTACTAGAGTTGTCACAGTCGGAGACGGTAACTACATTCATAACCGGTGATGAGGTCCAGAACAAGTCGGATGTCAAACAAGAGGAGAGGTTCTTCTTCTATGACAGAGAAGTCCAGAAAAAAAATGAGCAAATTAGAGATAAGTGCAGTGAAGATGCTGAAGAGCTATCGGAATCCAGCTTAGAGTCTGAACTTGACTCGGACAATGATGAGCAACCTATCAAGCGGGAGGTTTTGGAGAAGAGAGATGAGCAGCTTGTAGCACAACCTCCGGACATACAAATGGAAGCTATACAAAGGGAAGATCTACAGAAGGCAGATGAGAACTTTTTCGCAATACCGATCGAAAATCCAGACGCGCAAATCAAAATGGAGTCTGTGGTCGCTAAGAACAGCCTTACTGACTCACACATTAAGGTCGAAGTTGAGAGGCAGACTGAGATCACGATAGAGTACGAGGGAACCTCCTCCTCCGAGAGCGACTCGAGCGAGGATCTCTCCTCTCTCGACCTCCCACCTCCGATGAGCACCGCTAGACCGAGACCGAGTCACGTTTTAAATCCTCGGCCGACAGTCGAATCTATGGCCAACCGACCGCACGCCTGTGATCTCTGCCCGAGACGCTTCAAACTCAAGACGGGGCTGACGCAGCACAGGAAAACGCACACAGGAGAGAAACCGTACACCTGTGAATACTGTAGTCGCAAGTTCCTCTGTCGAACCAACCTCAAGACCCATCTCTACACACACACCGGCGAGAAACCGTACTCCTGTGATATTTGCCAGCGGAAATTCACAAATAGCAGTCAACTGAGGCGTCACATACCGAGGCATGTGGACTTCCGACCGTTTCAATGCCAGTTCTGCGATAAACGGTTTCTGCTGAAAGATGTGTACCAGAAGCATGTCTCGCGGCATACTGCTGTTGATGAGTTCAGATGTGACATATGCCAAACCAAGTACAAGACGCAGCAGTCCCTGCGGGTGCACTACCGCAGCCACACGGGCGAGAAGCCCTACTGCTGCGACGTGTGCGGCCTCCGCTTCGTGGTCAAGAAGCAGCTGGAGCGACACGCGACGGTCCACACCAACCTCAAACCCTTCGCCTGTCAGGTCTGCCCGGCTACCTTCAAGACGAAGCACTGTTTGAGAGCGCATGAGAAAAGACACACGGGGGATGACAGGTTCACCTGCAGCGTCTGCCAGCGTCGCTTCTCCCAGAACTGCGACCTCCGTAACCACATGCGTACACACATCGGCGATAGGCCCTTCGCCTGCGACTACTGCCCTAGCAAGTTCTACCAGCGGAGCACCCTCAACGCACACATCAGGACGCATACGGGGGAGAAGCCCTACACCTGCGATGTATGCCAGCGAAAGTTCACCCAAAACAGCAGCCTCACGAGGCATAGAAGAACGCATAACAGCAAGAGCACTTACATGTGA
Protein Sequence: MDKDIPKESCDLCLIEGRRVVNIKNTYLHPLYEKLSNMKIESETCCMCYICHTRLRQCHQLCVLAERSTRRLHMAFIDPLEVVGKSKDKSLLELSQSETVTTFITGDEVQNKSDVKQEERFFFYDREVQKKNEQIRDKCSEDAEELSESSLESELDSDNDEQPIKREVLEKRDEQLVAQPPDIQMEAIQREDLQKADENFFAIPIENPDAQIKMESVVAKNSLTDSHIKVEVERQTEITIEYEGTSSSESDSSEDLSSLDLPPPMSTARPRPSHVLNPRPTVESMANRPHACDLCPRRFKLKTGLTQHRKTHTGEKPYTCEYCSRKFLCRTNLKTHLYTHTGEKPYSCDICQRKFTNSSQLRRHIPRHVDFRPFQCQFCDKRFLLKDVYQKHVSRHTAVDEFRCDICQTKYKTQQSLRVHYRSHTGEKPYCCDVCGLRFVVKKQLERHATVHTNLKPFACQVCPATFKTKHCLRAHEKRHTGDDRFTCSVCQRRFSQNCDLRNHMRTHIGDRPFACDYCPSKFYQRSTLNAHIRTHTGEKPYTCDVCQRKFTQNSSLTRHRRTHNSKSTYM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01217740;
90% Identity: iTF_01217740;
80% Identity: -