Basic Information

Insect: Aricia agestis
Gene Symbol: -
Assembly: GCA_905147365.1
Location: LR990259.1:20020250-20022055[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0062 0.44 11.5 2.1 1 23 25 47 25 47 0.96

2 16 0.83 59 4.8 0.1 3 23 77 98 75 98 0.90

3 16 0.074 5.2 8.1 0.3 2 23 119 141 118 141 0.92

4 16 0.00045 0.032 15.1 2.0 2 23 147 169 146 169 0.95

5 16 0.00071 0.05 14.5 0.9 1 23 174 197 174 197 0.92

6 16 0.03 2.1 9.4 0.1 2 23 200 222 199 222 0.94

7 16 0.0036 0.25 12.3 1.2 2 22 229 249 228 249 0.95

8 16 0.23 17 6.6 0.7 1 23 308 331 308 331 0.92

9 16 0.27 19 6.4 0.2 3 23 360 381 358 381 0.94

10 16 0.056 3.9 8.5 0.1 3 23 405 427 403 427 0.94

11 16 0.00051 0.036 14.9 0.4 3 20 434 451 432 455 0.90

12 16 0.0098 0.69 10.9 0.4 1 23 460 483 460 483 0.97

13 16 0.0019 0.13 13.2 0.9 2 23 489 511 489 511 0.94

14 16 2.5e-05 0.0017 19.1 3.8 1 23 515 538 515 538 0.97

15 16 0.00012 0.0085 16.9 0.6 2 23 545 566 544 566 0.96

16 16 0.0021 0.15 13.0 2.4 1 23 572 594 572 594 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0062	0.44	11.5	2.1	1	23	25	47	25	47	0.96
2	16	0.83	59	4.8	0.1	3	23	77	98	75	98	0.90
3	16	0.074	5.2	8.1	0.3	2	23	119	141	118	141	0.92
4	16	0.00045	0.032	15.1	2.0	2	23	147	169	146	169	0.95
5	16	0.00071	0.05	14.5	0.9	1	23	174	197	174	197	0.92
6	16	0.03	2.1	9.4	0.1	2	23	200	222	199	222	0.94
7	16	0.0036	0.25	12.3	1.2	2	22	229	249	228	249	0.95
8	16	0.23	17	6.6	0.7	1	23	308	331	308	331	0.92
9	16	0.27	19	6.4	0.2	3	23	360	381	358	381	0.94
10	16	0.056	3.9	8.5	0.1	3	23	405	427	403	427	0.94
11	16	0.00051	0.036	14.9	0.4	3	20	434	451	432	455	0.90
12	16	0.0098	0.69	10.9	0.4	1	23	460	483	460	483	0.97
13	16	0.0019	0.13	13.2	0.9	2	23	489	511	489	511	0.94
14	16	2.5e-05	0.0017	19.1	3.8	1	23	515	538	515	538	0.97
15	16	0.00012	0.0085	16.9	0.6	2	23	545	566	544	566	0.96
16	16	0.0021	0.15	13.0	2.4	1	23	572	594	572	594	0.97

Sequence Information

Coding Sequence: ATGCGTAGACGGAAAAATCTACAGTTACTATTCAATAACACCACGGTAATACCGTTTAAATGGCGCGGGAGGTACCTATGCTTCTATTGCAGCAGAGGTAGCTCAGACTACACCGAACTACGCAAACACACAAAATCCCACGGCCCCTGCTCCACCAAAGACCATTCCCTAAAAGTTTTGAAGGGTGGAAAAAATATGGAGATCAAAATCGACGTATCCGAAATTATATGTGAGATTTGCAACGAACAGTTCCCAATATTAGATAAAATAATAGAACATCTGTGTAATGAGCATAACATGAAATACGATAAGGACGTCGACATGCCGATCGAGCAGTACAGACTCGAAGACTTGAGCTGCTTAACGTGCAGCGAGAAATTCACGTACTTCGGGTACCTCGTGTCGCACGTGAACGCCAACCATCCGAAAATATGCCTCGTGTGCGATAAATGCGAGCAGAAGTTCAATAAGAGGAGAGATTTGTTCTCGCACATGAAGAATTACCACCGAGAGGGAGGGTACGAGTGCGAGATTTGCTCCCAAAGCTTCACGTCGTTGAATGTGCTGAGGAAACACAAGGATAACCGCCATTTGACGACTTGCAGCATATGCGGCTTGAAAATACCCTCGGCCTCGTTAAAACAAAAACACATGGAATTAGAGCACCCCGACGATGGATGTCTCCAATGCGAAGTATGCTACAAAGATTTCCATACGAAACAAGGACTGAAAATGCACCTGAGAAAGTGTAAAGGCGAGGACGTTGTATTCGATGTCGGCGTTAAGAAGGAGGACGGTGCTATGGATTCCGATATTCTCTACGAAGCGGCGAAGCGACCCAGCGTTAAACAGATCAGAGAAAACATCGTAATCGTCATTAACATGTCTACGGCGATACCGTTTAACTTTTACAAAAATAAGTTTAACTGCTTCTATTGCTCCAAAGACTTTCTCGACTCCGATCTTATGAGAGAACACACTGTCATGGAACATCCTTCCTGCGACACGAAGGCGAAGTGCATTCGAAAATGCCGCGAGTCGGTCGCCTGCGTCAAAATAGACGTATCGTCTCTCGCTTGCAAGATTTGTTTCGAGTCGATGAAAGATTTGGACACCTTACTCGATCACCTGACGATCAAACACCAGGCCAACTACGATAGATCTATCACGACTTGCCTGCAGCCCTACAGACTCATAAAGGACCACATGGCTTGCCCGAACTGTCCGAACGAGGTGTTCAGATTTTTCGGAACACTGCTCAAGCACATGAACAACGTGCACACGAACAACAACATAATATGCGTTTACTGCGGACAGACGTTTAGAAGGGACGAGAATCTGCGAGTTCACGTGTGGCGACATCACAGGGATGGCAGGTTCAAGTGTAACATCTGCGGCGCCGACTGCAATATACCGTCGAGACTATACATGCACATGGCGAAGGCCCACGGGGTGAAAGCCGCTAAATGCACCAAGTGTTCGGAGACATTCGCCACCCAGTATCTTCGCCAGAAACATCTTATCGAGGTGCACAATTCCGGCCATGAGTGCACCTATTGCGGCAAACTGTTCACCCGCAACTCCTTCATGAGGGACCACATAAGACGGACCCACTTAAAGGAGAAGAACGTGGAGTGCTCCATATGCAATATGAAGTTTTTCAATAATATCCTCCTTAGGAGGCACATGGTGAAGCACAGCGGGGAGAAAAACTTCCACTGTGAAATGTGCGGGGAGAGGTTCTATTGGAGGAAGAGTCTTCGAAGTCACATGGCTAGACACGGGAAACACGACCAAGCGATATAA
Protein Sequence: MRRRKNLQLLFNNTTVIPFKWRGRYLCFYCSRGSSDYTELRKHTKSHGPCSTKDHSLKVLKGGKNMEIKIDVSEIICEICNEQFPILDKIIEHLCNEHNMKYDKDVDMPIEQYRLEDLSCLTCSEKFTYFGYLVSHVNANHPKICLVCDKCEQKFNKRRDLFSHMKNYHREGGYECEICSQSFTSLNVLRKHKDNRHLTTCSICGLKIPSASLKQKHMELEHPDDGCLQCEVCYKDFHTKQGLKMHLRKCKGEDVVFDVGVKKEDGAMDSDILYEAAKRPSVKQIRENIVIVINMSTAIPFNFYKNKFNCFYCSKDFLDSDLMREHTVMEHPSCDTKAKCIRKCRESVACVKIDVSSLACKICFESMKDLDTLLDHLTIKHQANYDRSITTCLQPYRLIKDHMACPNCPNEVFRFFGTLLKHMNNVHTNNNIICVYCGQTFRRDENLRVHVWRHHRDGRFKCNICGADCNIPSRLYMHMAKAHGVKAAKCTKCSETFATQYLRQKHLIEVHNSGHECTYCGKLFTRNSFMRDHIRRTHLKEKNVECSICNMKFFNNILLRRHMVKHSGEKNFHCEMCGERFYWRKSLRSHMARHGKHDQAI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00404055;
90% Identity: iTF_00404055;
80% Identity: -