Basic Information

Insect: Aricia agestis
Gene Symbol: -
Assembly: GCA_905147365.1
Location: LR990271.1:13249451-13262905[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0018 0.13 13.2 1.0 1 23 259 281 259 281 0.98

2 11 7.5e-05 0.0053 17.6 2.1 2 23 289 310 288 310 0.96

3 11 0.00037 0.026 15.4 0.9 1 23 341 364 341 364 0.98

4 11 0.0005 0.035 15.0 0.7 1 23 368 391 368 391 0.94

5 11 0.004 0.28 12.1 0.2 2 21 406 425 405 430 0.92

6 11 0.00011 0.0076 17.1 1.4 3 23 442 463 442 463 0.98

7 11 0.065 4.6 8.3 0.2 2 23 483 505 483 505 0.97

8 11 4.9e-06 0.00035 21.3 0.5 1 23 516 538 516 538 0.99

9 11 1.3e-06 8.8e-05 23.2 1.3 1 23 544 566 544 566 0.99

10 11 0.0001 0.0073 17.1 1.9 1 23 572 594 572 594 0.97

11 11 3.7e-05 0.0026 18.6 0.1 1 23 600 623 600 623 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0018	0.13	13.2	1.0	1	23	259	281	259	281	0.98
2	11	7.5e-05	0.0053	17.6	2.1	2	23	289	310	288	310	0.96
3	11	0.00037	0.026	15.4	0.9	1	23	341	364	341	364	0.98
4	11	0.0005	0.035	15.0	0.7	1	23	368	391	368	391	0.94
5	11	0.004	0.28	12.1	0.2	2	21	406	425	405	430	0.92
6	11	0.00011	0.0076	17.1	1.4	3	23	442	463	442	463	0.98
7	11	0.065	4.6	8.3	0.2	2	23	483	505	483	505	0.97
8	11	4.9e-06	0.00035	21.3	0.5	1	23	516	538	516	538	0.99
9	11	1.3e-06	8.8e-05	23.2	1.3	1	23	544	566	544	566	0.99
10	11	0.0001	0.0073	17.1	1.9	1	23	572	594	572	594	0.97
11	11	3.7e-05	0.0026	18.6	0.1	1	23	600	623	600	623	0.97

Sequence Information

Coding Sequence: ATGAATGATTTAAGAGTGTGTAGAACATGCCTCTCATTAGATGTAAAACTTGTGAATTTAAATTCCCAACCATTACATAATTATTATCAATTGTTATTGGGAAAATCTGTATTCTGGGACCCGATACCAGTAACAATTTGTGTAAAATGCACTGCCATGTTTACGAAGTTCAGCAAATTCCGTGAGCAATGCATCAACAGTGAGGGCATACTGAATGCTCTTGTATGCTCAAATGCGAAGATAACAGACAAAGAGATCGAGATTAGCAGAAGCAATCTACGCCTGTCTATAAACTTAAGTACAGAAACACAGCAAAATATAGATGTTTTGTGTAATTCAGAAGAATTTGATGTTGACGCGAAGATAGAACCCCACATTGATATAAAAGTAGAGGCCGACTATGACGACTACTATCCTCTGTCTAGTGACGATGAGCCTCTATCATTACACAGAAGCTTAAAAGATGAACAAGAGGGTAAAAAAGAGAAGAAGAAAAAGAAGAAATCTGAAAAGAGTAGGGAGGTTCCTATGGTGACAGTCGATTCTGTCGACGATGATGTCGAGCCCAGAAAGCAAAAACGTGGAAGGCCAAAGAAATCTAAAGAAGAATCAAAACCCAAGAAACCAGTGATAAGACGTACCCAGAATACGGGGGGAGTGTGTAACGATGATATGGATTTGGAGACATTCTGCACCATCACAAAGTTGACGCTCGAGGAGCAAATAGCTGAGGTGGCTAAGCGGCAGAACTCGTCAAATTACAAGAACGCGTTATTTCAGTGTGAGCTCTGTTACAAGGGCTTCATAGACGACGAGGCATGGAAACACCATCTCAACAAACACAGTCCGAGTTCCGGCGACATGGAGTGTCCGGTGTGCAAGATGCGTTTCCGGACGAAGCGCACCCTGCAGAAGCACACGTCCAACCACGAGAAGAAGTACGAGTGTAAAGCCTGCTGCTACGTGTCGCAGACCACAACTCAAGCCAAGCAGCATCAGCGCTGGCATAAAGGAGTGACTTACAAATGTCAGTACTGCGATGAAGTCTCTACCAAATGGACGTCGTACCTCAGCCACGTGCGTATCAAACATCCGTCTGAACACATCTGTCCCACGTGCGGGTACTCCTTCGTCAGCCGCCTCGGACTCACCATGCACAGGACCATGATGCATAAGGACCAAGATCAGAAGGAGACAGACAACACAGAGGGTACATACTGCGAACAGTGCGACGTTAAGTTCGAAACGCCGCAAGCTTGGAGGCGGCACATGGTCACCTCCGTGAAACATACGCAGAGCCGGGATTTGAAACTAGTCAACGGCTGTCGCGTCTGCGGCGAACGGTTCGCGGATAGCGAGCAGCTACGGATCCATCACAGACGTTCCCACGCGCGCGCCCGCCCCAAGAACTACGGCAAGCCGCGCAACGAACGCACCTGGCCCGCCAAGTGCACATATTGTCCGGAAGAGATCCCGAACGCGCGTGAGTATTGGACCCACTTCCGTCGCGAGCACCCCGACAAGAACTATCCCATACCGAAGGACTACGTGTGCGATATATGCGGGAAAAGTTTCCGGGGTAACGCGTTCCTCGTGTACCACAAGCGGACTCACTCCAACGAGCGCGGGTTCAAGTGCCCGCTGTGTCCCAAGGCGTTCTTCAACCGCTACAACCTGCAGATGCACGAGAAAACCCATTCGGAGAACAGGCCGCATCCGTGTTCGGTGTGCTTCAAAGCGTTCAAGAGTAAGGGCGCGCTGGATAGACATTTCAGGAGCCACACAGGCGAGAAGCCCTACGCTTGCGAAGTGTGCGGAAAAGCGTTCGCGCAGTCCAACAGTAGGAAGCTACACGTCAGGACCGTTCATCTCAAGCAACCCTCTCCGTATCTAAGCCGCAGCCGCCAGGAGCGCCGCAAGTGCGCCGCCGCCGCGCTGCAGCTCAAAGACGCACACTACTAA
Protein Sequence: MNDLRVCRTCLSLDVKLVNLNSQPLHNYYQLLLGKSVFWDPIPVTICVKCTAMFTKFSKFREQCINSEGILNALVCSNAKITDKEIEISRSNLRLSINLSTETQQNIDVLCNSEEFDVDAKIEPHIDIKVEADYDDYYPLSSDDEPLSLHRSLKDEQEGKKEKKKKKKSEKSREVPMVTVDSVDDDVEPRKQKRGRPKKSKEESKPKKPVIRRTQNTGGVCNDDMDLETFCTITKLTLEEQIAEVAKRQNSSNYKNALFQCELCYKGFIDDEAWKHHLNKHSPSSGDMECPVCKMRFRTKRTLQKHTSNHEKKYECKACCYVSQTTTQAKQHQRWHKGVTYKCQYCDEVSTKWTSYLSHVRIKHPSEHICPTCGYSFVSRLGLTMHRTMMHKDQDQKETDNTEGTYCEQCDVKFETPQAWRRHMVTSVKHTQSRDLKLVNGCRVCGERFADSEQLRIHHRRSHARARPKNYGKPRNERTWPAKCTYCPEEIPNAREYWTHFRREHPDKNYPIPKDYVCDICGKSFRGNAFLVYHKRTHSNERGFKCPLCPKAFFNRYNLQMHEKTHSENRPHPCSVCFKAFKSKGALDRHFRSHTGEKPYACEVCGKAFAQSNSRKLHVRTVHLKQPSPYLSRSRQERRKCAAAALQLKDAHY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01217718;
90% Identity: iTF_01217718;
80% Identity: -