Basic Information

Insect: Aricia agestis
Gene Symbol: -
Assembly: GCA_905147365.1
Location: LR990258.1:1685706-1687406[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.2 14 6.8 0.0 1 20 112 131 112 132 0.94

2 12 3.5e-05 0.0025 18.6 3.2 1 23 221 243 221 243 0.97

3 12 0.04 2.8 9.0 6.7 1 23 252 274 252 274 0.98

4 12 4e-05 0.0028 18.4 2.5 1 23 282 305 282 305 0.97

5 12 0.0055 0.39 11.7 0.4 1 23 311 333 311 333 0.98

6 12 1.3e-05 0.0009 20.0 2.5 1 23 339 361 339 361 0.98

7 12 3.2e-07 2.3e-05 25.0 1.6 1 23 367 389 367 389 0.95

8 12 4.5e-06 0.00032 21.4 0.8 1 23 395 417 395 417 0.99

9 12 6.7e-07 4.7e-05 24.0 0.6 1 23 423 445 423 445 0.98

10 12 5e-05 0.0035 18.1 0.4 1 23 451 473 451 473 0.98

11 12 7.4e-05 0.0052 17.6 3.4 1 21 479 499 479 501 0.96

12 12 7.1e-07 5e-05 23.9 0.3 1 23 507 529 507 529 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.2	14	6.8	0.0	1	20	112	131	112	132	0.94
2	12	3.5e-05	0.0025	18.6	3.2	1	23	221	243	221	243	0.97
3	12	0.04	2.8	9.0	6.7	1	23	252	274	252	274	0.98
4	12	4e-05	0.0028	18.4	2.5	1	23	282	305	282	305	0.97
5	12	0.0055	0.39	11.7	0.4	1	23	311	333	311	333	0.98
6	12	1.3e-05	0.0009	20.0	2.5	1	23	339	361	339	361	0.98
7	12	3.2e-07	2.3e-05	25.0	1.6	1	23	367	389	367	389	0.95
8	12	4.5e-06	0.00032	21.4	0.8	1	23	395	417	395	417	0.99
9	12	6.7e-07	4.7e-05	24.0	0.6	1	23	423	445	423	445	0.98
10	12	5e-05	0.0035	18.1	0.4	1	23	451	473	451	473	0.98
11	12	7.4e-05	0.0052	17.6	3.4	1	21	479	499	479	501	0.96
12	12	7.1e-07	5e-05	23.9	0.3	1	23	507	529	507	529	0.98

Sequence Information

Coding Sequence: ATGGAGTTTGATATTATGACTTCGAATAATATCTGCCGGACTTGTCTGAAAGAATCTGTGAATTTAAAACCGCTGTTAAATGAAATAGATAAAGATGGTCGAACTATTTGTGAAGTGTTAGCTTTCGTATCAAATATTGATATTTGTATCAACGACCGATATCCGAATCATGTCTGTGGACCCTGCCAAGACAATTTATTAAAAGCTGAGGAATTCAAAAAGCAGTGCATTCAATCAGAGAGTGTACTAAAAGTGTGCTTCGGCCGCAACGAGCTCGAGAAGTCGACGGTCAAATACGAAAACATTCCTCACTCTAATGCCGATAAAGATTACTACCAGTGTGCTATATGCTTCCTCAAGTTTCCCGATGGACGATTACTGGAAGACCACGTCGCGTGTCATAGAACTTTTAAAGAAGAATTTGGTCCTAAGCCGCTAGGTTCCCCCTCATTGGTTATAAAGCCCGTTCACTCTCACCAATACAAGAATCCGTTAAAAAATAATGTAGAGGAAAATCCAATGACGTTGAAGGAGGAGGCACTAGATTTTGATCATGACCTTTTCCAGGATGAGATAACTTTCAGTCCCAAAACTTTAGAAATTGAAGTCCCGAGTTTTAAGCCTCCGAATAATTCTAAAGATTGCATTAATACTGTACTGCATGTGTGTAAAACTTGTAACAAAGCTTTCGATACTAAAAAGGCCCTAGTAAAACATTATACCACTCATTCAAAGATTGTACCTAAGGAGGAGTACCAATGTCATCTGTGCAACCGCAAATGTCTGAAGAAGTCATCGCTGGTCTCGCATTTGAAGAGTCACGAACATAAAGATAAGATAAAGTACACATGCCCCACTTGCAATAGAGAATTTCAGCACCAAGCCCATCTAGACAAACACATACTCTCTGTCCATGATAAAAAAGTCATATTCTCATGCACACGGTGCTCCAAATGGTTTCCCACACAATTGAGTCTAGAAGCCCATCAAGAAAGTCACAAGGTAGATAAAAAACATCAGTGTAAGACATGCGGAAAGGCATTCTACATGCTCTCCACCTTGCAGGACCATGAACGCACTCACACAGGAGAAAAGCCCTTCCTATGTTCAGTTTGCGGCAAAGGCTTCAGTCAAAAAACAAATTTACAGCAGCACACTAGAAGACATTTGGGAATTAAAATGTTTAAATGTGACCAGTGTGAAATGACGTTTATATCTAAAGGGGAACTGCAATCACATGTGCGGAAACATACTGGAGCACATCCCTTCATATGCGATGAATGTGGCAACGGTTTTACGACATCCAGTTCTCTTGTGAAGCACCGACGCACCCACACGGGGGAACGGCCCTATGCATGCGACCTATGCCCATTAAGGTTCAAAGTATTAGGAACTCTAAAGAATCATAGAAGGACCCACACAGGAGAAAAGCCGTATCAATGTTCACACTGTGAGAAAGCTTTTATACAAAGACAGGATCTGATATCTCACATACGCTGTCATACGGGCGAACGTCCCTTCACATGTACGGTGTGTGGGCAAGCGTTCAGAAAGTCAACAGCTCTTAAAGCTCATATAAAAATACATGGAATGATGGAATGA
Protein Sequence: MEFDIMTSNNICRTCLKESVNLKPLLNEIDKDGRTICEVLAFVSNIDICINDRYPNHVCGPCQDNLLKAEEFKKQCIQSESVLKVCFGRNELEKSTVKYENIPHSNADKDYYQCAICFLKFPDGRLLEDHVACHRTFKEEFGPKPLGSPSLVIKPVHSHQYKNPLKNNVEENPMTLKEEALDFDHDLFQDEITFSPKTLEIEVPSFKPPNNSKDCINTVLHVCKTCNKAFDTKKALVKHYTTHSKIVPKEEYQCHLCNRKCLKKSSLVSHLKSHEHKDKIKYTCPTCNREFQHQAHLDKHILSVHDKKVIFSCTRCSKWFPTQLSLEAHQESHKVDKKHQCKTCGKAFYMLSTLQDHERTHTGEKPFLCSVCGKGFSQKTNLQQHTRRHLGIKMFKCDQCEMTFISKGELQSHVRKHTGAHPFICDECGNGFTTSSSLVKHRRTHTGERPYACDLCPLRFKVLGTLKNHRRTHTGEKPYQCSHCEKAFIQRQDLISHIRCHTGERPFTCTVCGQAFRKSTALKAHIKIHGMME

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01217688;
90% Identity: iTF_01217688;
80% Identity: -