Basic Information

Insect: Aricia agestis
Gene Symbol: -
Assembly: GCA_905147365.1
Location: LR990268.1:4992639-5009836[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 5.8e-05 0.0041 17.9 1.5 1 23 415 437 415 437 0.96

2 12 0.0012 0.082 13.8 2.1 1 20 443 462 443 465 0.94

3 12 1.4e-05 0.00099 19.9 5.6 1 23 485 507 485 507 0.98

4 12 0.00013 0.0088 16.9 4.7 1 23 513 535 513 535 0.99

5 12 2.4e-05 0.0017 19.1 5.3 1 23 541 563 541 563 0.97

6 12 7.6e-06 0.00054 20.7 7.3 1 23 569 591 569 591 0.97

7 12 4.8e-07 3.4e-05 24.5 2.9 1 23 597 619 597 619 0.97

8 12 6.8e-05 0.0048 17.7 6.7 1 23 625 647 625 647 0.97

9 12 3e-05 0.0021 18.8 5.4 1 23 653 675 653 675 0.98

10 12 3.3e-07 2.3e-05 25.0 1.9 1 23 681 703 681 703 0.98

11 12 3.3e-05 0.0023 18.7 7.9 1 23 709 731 709 731 0.98

12 12 1.4e-05 0.001 19.8 4.3 1 21 737 757 737 757 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	5.8e-05	0.0041	17.9	1.5	1	23	415	437	415	437	0.96
2	12	0.0012	0.082	13.8	2.1	1	20	443	462	443	465	0.94
3	12	1.4e-05	0.00099	19.9	5.6	1	23	485	507	485	507	0.98
4	12	0.00013	0.0088	16.9	4.7	1	23	513	535	513	535	0.99
5	12	2.4e-05	0.0017	19.1	5.3	1	23	541	563	541	563	0.97
6	12	7.6e-06	0.00054	20.7	7.3	1	23	569	591	569	591	0.97
7	12	4.8e-07	3.4e-05	24.5	2.9	1	23	597	619	597	619	0.97
8	12	6.8e-05	0.0048	17.7	6.7	1	23	625	647	625	647	0.97
9	12	3e-05	0.0021	18.8	5.4	1	23	653	675	653	675	0.98
10	12	3.3e-07	2.3e-05	25.0	1.9	1	23	681	703	681	703	0.98
11	12	3.3e-05	0.0023	18.7	7.9	1	23	709	731	709	731	0.98
12	12	1.4e-05	0.001	19.8	4.3	1	21	737	757	737	757	0.96

Sequence Information

Coding Sequence: ATGAATGCGGATCATCATAATATTAACACGGGTGGTGGCCAACCGCCTGGCAATTCGGAGGCTCAGAGTCAGAGAGTTCCATCGTCCCAGCAGCAGCAGTCAAGTAGTCTCCCTCCCACCACATCTGCTACTGATTTACGAGTAAACTCCGCGGCAGTCAATGTTGCTTTGTCGAGCGTCGCTAAATACTGGGTGTTCACAAATTTGTTTCCTGGACCCATACCACAAGTGTCTGTATACGGCCTGCCTACAAGCGCCAGACTGGAGAATGGAAAACCTGTCCAGGATCTCGGTCAAGCTCATCAAAGTATACTGAATGGTGATCCGAATATAATTCTGGGTCACCATGGTGGGCAGCAGCCCATAGCTGTCTCTGCATCTGGTCAACAAATACCTGTATCACAAATAATTGCATCACAGGCAGGACAAGATGCCCTGGCTCACTCGCAGTCAGAACTCGGGTCTCAGCAGTCATCCTCGTCCAGCGCACAGGTCACAGCCGGGGGCTCCCAAACCTCGCACCAGGTACCCAATAACCGGGTGGAGTTTGTACAACACCATAACATTGATATGGTAAATTATGTGGGACATCATTCTCAGCTTCTTCAACAACAGCTGATGGCTGCTTCTCGACAAGAGCACGCAAATCAGCAGATCCAACTCACAGTGAGCGAGGATGGTATTGTGACGGTCGTTGAGCCTGGCGGCAGCAACAAGTTGGTCGACAAGGATGAGCTACACGAGACCATCAAGATGCCGACAGACCACGCGCTCACTGTGCACCAGCTGCAGCAGATTGTGGGGCATCACCAGGTTATCGACAGTGTAGTACGTATAGGCCAAGGTACTGGTGACCCAGCAAATGTACTTGTGACACAGAATCCCGATGGCACCACCTCCATCGAGACGAGCTCCAGCGAACTTAGTCTGGCCCAGGTGAAAGACGAGAAGACAACCATCGCGATACCGGCAGACATCAAGGATATCAAGGGAATTGACTTGAAGAATGTTGGTGCAATGGGTATGGAGGGTACGGTTGTGAAAATATCTACGGGCTCAGATCAAGATCTACACACCATGTATAAAGTAAATGTGGAGGATCTATCACAGCTGTTGGCTTACCACGAGGTGTTTGGGAAACTCAACACGGAGGCCGCACCACAGGCAAAGGTTATAGCCGAAGTAGAGGTGATCCCAGGGACCAGCGGAGCGTTGGCAGAGTCCGAGACCTCCCCGGGCCATCACGCCTGTGATATATGCGGGAAAATATTCCAGTTCAGATACCAGCTCATAGTACATAGGCGATATCACGGAGAAACCAAACCTTTTACATGTCACGTCTGCGGCTCGACCTTCGCGAATCCTGTTGAACTGTCAAGACACGGGAAATGTCATCTGGCCGCGGGAGATCCAGCCGAGCGTCAGGCGAAGAGGTTGGCGCAGGACAAGCCGTACGCGTGCACCACTTGCCACAAGACCTTCTCGCGGAAGGAGCATCTCGACAACCACGTGCGGAGTCACACCGGGGAAACCCCTTATAGATGTCAGTTCTGCGCCAAGACGTTCACACGCAAGGAGCACATGGTGAACCACGTCCGCAAACACACTGGCGAGACGCCGCATCGCTGTGAGATATGCAAGAAGAGCTTCACGAGAAAGGAACACTTTATGAACCACGTCATGTGGCATACCGGTGAAACGCCGCACCATTGTCAAATTTGTGGCAAGAAGTATACTAGGAAGGAGCACTTAGTGAACCATATGAGGTCCCATACGAACGACACTCCGTTCAGGTGTGAACTGTGCGGCAAGTCCTTCACCCGGAAGGAACATTTCACCAACCACATACTGTGGCATACCGGTGAGACTCCGCACCGCTGCGACTTCTGTTCCAAGACGTTTACGCGAAAGGAGCATCTACTGAACCACGTTCGACAGCATACGGGCGAGTCGCCCCATCGCTGCAACTACTGCGCCAAAAGTTTCACGCGACGGGAACACCTCGTCAACCATGTGCGACAACACACGGGGGAAACGCCGTTCCAGTGCGGATACTGTCCGAAGGCTTTCACCCGGAAAGATCATTTAGTGAACCACGTCCGACAGCACACTGGCGAATCTCCCCACAAGTGTTCCTTCTGCACCAAGTCGTTCACTCGCAAAGAGCACCTGACCAATCACGTGCGGCAGCACACGGGGGAATCCCCGCACCGCTGCTCCTACTGCAGCAAGAGCTTCACGCGCAAGGAACACCTCAATAACCACGTCAGGTGA
Protein Sequence: MNADHHNINTGGGQPPGNSEAQSQRVPSSQQQQSSSLPPTTSATDLRVNSAAVNVALSSVAKYWVFTNLFPGPIPQVSVYGLPTSARLENGKPVQDLGQAHQSILNGDPNIILGHHGGQQPIAVSASGQQIPVSQIIASQAGQDALAHSQSELGSQQSSSSSAQVTAGGSQTSHQVPNNRVEFVQHHNIDMVNYVGHHSQLLQQQLMAASRQEHANQQIQLTVSEDGIVTVVEPGGSNKLVDKDELHETIKMPTDHALTVHQLQQIVGHHQVIDSVVRIGQGTGDPANVLVTQNPDGTTSIETSSSELSLAQVKDEKTTIAIPADIKDIKGIDLKNVGAMGMEGTVVKISTGSDQDLHTMYKVNVEDLSQLLAYHEVFGKLNTEAAPQAKVIAEVEVIPGTSGALAESETSPGHHACDICGKIFQFRYQLIVHRRYHGETKPFTCHVCGSTFANPVELSRHGKCHLAAGDPAERQAKRLAQDKPYACTTCHKTFSRKEHLDNHVRSHTGETPYRCQFCAKTFTRKEHMVNHVRKHTGETPHRCEICKKSFTRKEHFMNHVMWHTGETPHHCQICGKKYTRKEHLVNHMRSHTNDTPFRCELCGKSFTRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNYCAKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSFCTKSFTRKEHLTNHVRQHTGESPHRCSYCSKSFTRKEHLNNHVR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01252031;
90% Identity: -
80% Identity: -