Aage008248.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Aricia agestis
Gene Symbol
-
Assembly
GCA_905147365.1
Location
LR990263.1:1635544-1638081[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 5e-07 0.00018 21.5 0.0 1 35 16 51 16 58 0.90

Sequence Information

Coding Sequence
ATGAGTTCTTCGGAGAAAAGAAAGAAGAAGGAAAGGAGAACATACACAGAAGACGATTTAAAGAAAGCGTTAAATGAAATTCGAGAGAAGAATAAATCGGTAAGACAAATATGTAAAGAATATGCTATTCCCAAGACCACAATATTGGATAAAATCAGTGGGCGCAGACCAGATGGAGTAAAGAAACCTGGACCAGAACCAGCGCTAGGAATAGATGGTGAAAAAAAAGTAGTTGAATGGCTTCTTGATATTTCCAAATGTGGATTTCCAGTGAAAAAGCAAGAATTGTTGAATACTGTTCAGAAAATAATTCGAGATGGGAAGTTTAAAAATAATTTTAAAGATGATCGCCCAGGTCAAAAGTGGTTTGAAAAATTTTTGGCCAGAAATAAAGAAATTTCACTTAAAAATGCGGAGGGTATTAATAAAGCTAGAGCCCAAGTCACAGAAGAGTCAATCAGATTGTGGTTTAGAGAATTAGAGGAATATTTAGACCGTATACACCAAAAAGATATTTTGAGTGACCCGAAACGAATTTTTAATGGGGACGAAAGTGGTTTTGCTCTTTGTCCAAAGACAGGCAAAGTTTTAGGGCCAAGAGGGTTCAAAAACTTATATCAAATAAAGCCAAGTAATGAAAAAGAAAATATAACGGTTTTATTAACATTTAATGCGAATGGAGATTTGTGTCCACCTTGTATCGTGTTTCCTTACATTAGACCACCAAAAGCTGTAGTGAATAGTATGCCTCAAGAATGGTGCTTAGGCAGATCGGAGACAGGTTGGATGAGAGGAGATATATTCTTTGAATATATCACCAATGAGTTTCACAACTGGGTAGTAGAAAATAACATAAAAAAACCAGTGCTTTTGCTAGTAGATGGACATAAATCGCACATGTCCTTGACGTTAAGTAAGATGTGTGAACAAATGCAGATTATTTTGTATGCCCTTCCGCCCAATACCACCCACATTTTACAGCCAGCTGACGTTAGCGTATTTGCACCGGTAAAATCATATTGGAGATCAACAGTCCGCGCATTCCTATCAAAACCAGAAAATTTGAATTCTGCCGTCACAAAAACAAACTTTTGCAAATTGTTAAATGATGCATTGAAACATCCTAACATGCCCAATAACATAAAAAATGGGTTTAAGCGATGTGGTCTTTACCCATTCGATGCCAATAGTCCAGATTACACTAAATGTGTAAAAAACACTTTGGAAAATGTTCAGGCTGTTGATCAACACCCACAAGATGTTACCCGCTCGGATATTAATAGTTTTAAAAAAGTTTTCAAAAAACTGAAACCGAGACTAAAAGAAAAGAATATTGACATTCAAACTATAATGAAAGAAGTCAATAGGTTGAAAAAGTCTCTCCCTGCAGAAGTAGGATTTGCAGAGATTTCTATTGAAACTGAATCTGAGAGGTCACATACGGAACTTTCAATAGAAAAGAATAATTGTACTATTTTTAGTCCTATTGATTGTGAATTGGATACAACTAGAGAAATCACTATCTCTTCATTTCACGAAGACGCCGAAAATAAAACCGATGAAGCTAACTCCGATCCTACTGTACAGGTTCAAACAGTATCAGTGGAAATACATTCTGCACCAAAACAATTTACCGAATCTTGTACATCGAACATCAATAAATATCATAAAACCAGCAATAGTACTCTAGCATCTTCTAAGATTGACTATGACGAAATCACAGTATACCCAGATAATTCAACTCTTGACACCAACAAAAATGATTCGTTCCCTGACTTGTCCCTTTCGACATTACACCTTTCTGGCAGCTACTTCGATGTCGGCTCTATGGTGTCCTTAGATGACGTTCTAATTCTACCATTAGAAGATATTGCATCAACTCCCACTTTATTAAGTTTTGAGAAAGAAACTGCCATCAAGGAACTAACTCCAGAACTGCCTCGGACTTCATCATCAGCATCCACTGTATCGCTACCATCCTTACCTACAGAGTCTCCAGTACAACCGGCTTTAGCAGTAACACAAAACAAAACATCTGACCCATTTAAACACCACCTCATGCTACCGGAAATTTCTAACAAAATACGTAAAGAGAATCAAAGAACTCCAGCAGCCATATCTTCTGCTGCATGGAGAAAATATTATGAAGACAAAGAACAGATCAAGAACGAAAAGCAGGAAGCCATACGAAAAAGAAAGTTAGAAAGAATAGAAAAACAAGAACAGAAAAAGACTTTAAAACATTCTCAAACTGGGCGTAAAACTGCTCCTAAACGAAAAAAAAATCTACATTCTCATCAAGAAATCACACAAGAAACGATAAATGAGGAATTTGAGAAAGAAAATTTACCAGCCGTGGAGAGGGTGAAATGTTCTGAATGTGATGATATATTAATTTCAGATGTAGAAGACGACAATGAGAAAAACATAGGCTGTGACAAATGTATTAGATGGTATCATCTGAAATGCACGCAATTTGTTGGATTAAGTTATGTAGAGGCCAAAGATAAATCTTTTGAATGTAACATGTGTCATTAA
Protein Sequence
MSSSEKRKKKERRTYTEDDLKKALNEIREKNKSVRQICKEYAIPKTTILDKISGRRPDGVKKPGPEPALGIDGEKKVVEWLLDISKCGFPVKKQELLNTVQKIIRDGKFKNNFKDDRPGQKWFEKFLARNKEISLKNAEGINKARAQVTEESIRLWFRELEEYLDRIHQKDILSDPKRIFNGDESGFALCPKTGKVLGPRGFKNLYQIKPSNEKENITVLLTFNANGDLCPPCIVFPYIRPPKAVVNSMPQEWCLGRSETGWMRGDIFFEYITNEFHNWVVENNIKKPVLLLVDGHKSHMSLTLSKMCEQMQIILYALPPNTTHILQPADVSVFAPVKSYWRSTVRAFLSKPENLNSAVTKTNFCKLLNDALKHPNMPNNIKNGFKRCGLYPFDANSPDYTKCVKNTLENVQAVDQHPQDVTRSDINSFKKVFKKLKPRLKEKNIDIQTIMKEVNRLKKSLPAEVGFAEISIETESERSHTELSIEKNNCTIFSPIDCELDTTREITISSFHEDAENKTDEANSDPTVQVQTVSVEIHSAPKQFTESCTSNINKYHKTSNSTLASSKIDYDEITVYPDNSTLDTNKNDSFPDLSLSTLHLSGSYFDVGSMVSLDDVLILPLEDIASTPTLLSFEKETAIKELTPELPRTSSSASTVSLPSLPTESPVQPALAVTQNKTSDPFKHHLMLPEISNKIRKENQRTPAAISSAAWRKYYEDKEQIKNEKQEAIRKRKLERIEKQEQKKTLKHSQTGRKTAPKRKKNLHSHQEITQETINEEFEKENLPAVERVKCSECDDILISDVEDDNEKNIGCDKCIRWYHLKCTQFVGLSYVEAKDKSFECNMCH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01280222;
90% Identity
iTF_00403753;
80% Identity
-